EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCANG00000034748 (Gene tree)
Gene ID: 105508796
Gene Symbol: R3HDM1
Alias: KIAA0029|R3HDM
Full Name: R3H domain containing 1
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Plus strand
Length: 144468 bases
Position: chrKN980140.1:5329989-5474456
Accession: 105508796
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000022873	R3H	PF01424.22	2.4e-11	1	1
ENSCANP00000022866	R3H	PF01424.22	2.8e-11	1	1
ENSCANP00000022884	R3H	PF01424.22	2.8e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000045868	R3HDM1-203	3306	XM_011937726	ENSCANP00000022884	1101 (aa)	XP_011793116	A0A2K5J1S6
ENSCANT00000045857	R3HDM1-202	3901	XM_011937730	ENSCANP00000022873	972 (aa)	XP_011793120	A0A2K5J1S4
ENSCANT00000045850	R3HDM1-201	4792	XM_011937728	ENSCANP00000022866	1101 (aa)	XP_011793118	A0A2K5J276
ENSCANT00000045897	R3HDM1-205	1340	-	ENSCANP00000022913	446 (aa)	-	A0A2K5J1W2
ENSCANT00000045891	R3HDM1-204	1284	-	ENSCANP00000022907	427 (aa)	-	A0A2K5J2B0

Gene Model

Click here to download ENSCANG00000034748's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000034748's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCANG00000034748	R3HDM1	70	50.682	ENSCANG00000032594	ARPP21	94	50.310
ENSCANG00000034748	R3HDM1	99	49.802	ENSCANG00000043807	R3HDM2	95	57.421

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000034748	R3HDM1	100	98.728	ENSG00000048991	R3HDM1	100	98.728	Homo_sapiens
ENSCANG00000034748	R3HDM1	88	63.200	ENSAPOG00000020850	r3hdm1	92	63.200	Acanthochromis_polyacanthus
ENSCANG00000034748	R3HDM1	100	94.565	ENSAMEG00000014886	R3HDM1	100	94.746	Ailuropoda_melanoleuca
ENSCANG00000034748	R3HDM1	87	57.843	ENSAOCG00000005192	r3hdm1	95	57.843	Amphiprion_ocellaris
ENSCANG00000034748	R3HDM1	87	62.933	ENSAPEG00000016108	r3hdm1	95	62.933	Amphiprion_percula
ENSCANG00000034748	R3HDM1	87	63.172	ENSATEG00000000232	r3hdm1	95	63.172	Anabas_testudineus
ENSCANG00000034748	R3HDM1	100	78.791	ENSAPLG00000015231	R3HDM1	100	79.061	Anas_platyrhynchos
ENSCANG00000034748	R3HDM1	100	76.486	ENSACAG00000001676	R3HDM1	100	76.923	Anolis_carolinensis
ENSCANG00000034748	R3HDM1	100	98.183	ENSANAG00000035334	R3HDM1	100	98.183	Aotus_nancymaae
ENSCANG00000034748	R3HDM1	87	60.836	ENSACLG00000027282	r3hdm1	94	61.358	Astatotilapia_calliptera
ENSCANG00000034748	R3HDM1	100	66.425	ENSAMXG00000012861	R3HDM1	100	71.875	Astyanax_mexicanus
ENSCANG00000034748	R3HDM1	86	71.965	ENSAMXG00000003536	r3hdm1	100	62.704	Astyanax_mexicanus
ENSCANG00000034748	R3HDM1	60	40.603	ENSAMXG00000020587	arpp21	82	37.757	Astyanax_mexicanus
ENSCANG00000034748	R3HDM1	100	92.195	ENSBTAG00000013302	R3HDM1	100	91.388	Bos_taurus
ENSCANG00000034748	R3HDM1	100	97.548	ENSCJAG00000011718	R3HDM1	100	97.548	Callithrix_jacchus
ENSCANG00000034748	R3HDM1	100	94.837	ENSCAFG00000005075	R3HDM1	100	95.018	Canis_familiaris
ENSCANG00000034748	R3HDM1	100	94.746	ENSCAFG00020016119	R3HDM1	100	95.471	Canis_lupus_dingo
ENSCANG00000034748	R3HDM1	100	93.569	ENSCHIG00000020851	R3HDM1	100	93.841	Capra_hircus
ENSCANG00000034748	R3HDM1	100	89.279	ENSCPOG00000012784	R3HDM1	100	88.928	Cavia_porcellus
ENSCANG00000034748	R3HDM1	100	97.548	ENSCCAG00000027199	R3HDM1	100	97.548	Cebus_capucinus
ENSCANG00000034748	R3HDM1	100	98.910	ENSCATG00000023642	R3HDM1	100	98.910	Cercocebus_atys
ENSCANG00000034748	R3HDM1	100	89.182	ENSCLAG00000007962	R3HDM1	100	89.182	Chinchilla_lanigera
ENSCANG00000034748	R3HDM1	100	95.947	ENSCSAG00000016356	R3HDM1	100	95.947	Chlorocebus_sabaeus
ENSCANG00000034748	R3HDM1	80	93.939	ENSCHOG00000013638	R3HDM1	81	94.118	Choloepus_hoffmanni
ENSCANG00000034748	R3HDM1	91	91.513	ENSCPBG00000009645	R3HDM1	100	91.513	Chrysemys_picta_bellii
ENSCANG00000034748	R3HDM1	99	88.350	ENSCGRG00001012357	R3hdm1	97	88.350	Cricetulus_griseus_chok1gshd
ENSCANG00000034748	R3HDM1	99	90.909	ENSCGRG00000012080	R3hdm1	100	90.365	Cricetulus_griseus_crigri
ENSCANG00000034748	R3HDM1	81	65.246	ENSCSEG00000008944	r3hdm1	82	65.246	Cynoglossus_semilaevis
ENSCANG00000034748	R3HDM1	87	61.333	ENSCVAG00000007582	r3hdm1	91	57.635	Cyprinodon_variegatus
ENSCANG00000034748	R3HDM1	64	35.952	ENSDARG00000061081	arpp21	83	36.220	Danio_rerio
ENSCANG00000034748	R3HDM1	100	91.057	ENSDNOG00000000771	R3HDM1	100	90.549	Dasypus_novemcinctus
ENSCANG00000034748	R3HDM1	100	82.971	ENSETEG00000013606	R3HDM1	100	81.406	Echinops_telfairi
ENSCANG00000034748	R3HDM1	66	41.347	ENSEBUG00000014746	arpp21	97	42.273	Eptatretus_burgeri
ENSCANG00000034748	R3HDM1	100	97.238	ENSEASG00005007392	R3HDM1	100	94.837	Equus_asinus_asinus
ENSCANG00000034748	R3HDM1	99	97.238	ENSECAG00000019114	R3HDM1	100	95.109	Equus_caballus
ENSCANG00000034748	R3HDM1	91	86.322	ENSEEUG00000012589	R3HDM1	91	86.322	Erinaceus_europaeus
ENSCANG00000034748	R3HDM1	93	51.039	ENSELUG00000014413	r3hdm1	96	54.111	Esox_lucius
ENSCANG00000034748	R3HDM1	83	77.994	ENSELUG00000004909	R3HDM1	99	55.638	Esox_lucius
ENSCANG00000034748	R3HDM1	100	96.961	ENSFCAG00000027113	R3HDM1	100	96.798	Felis_catus
ENSCANG00000034748	R3HDM1	56	75.369	ENSFALG00000013731	R3HDM1	86	75.430	Ficedula_albicollis
ENSCANG00000034748	R3HDM1	100	88.401	ENSFDAG00000016478	R3HDM1	100	89.369	Fukomys_damarensis
ENSCANG00000034748	R3HDM1	87	57.353	ENSFHEG00000018713	r3hdm1	91	62.133	Fundulus_heteroclitus
ENSCANG00000034748	R3HDM1	57	64.783	ENSGMOG00000006042	-	74	65.217	Gadus_morhua
ENSCANG00000034748	R3HDM1	94	77.597	ENSGALG00000012246	R3HDM1	99	85.902	Gallus_gallus
ENSCANG00000034748	R3HDM1	87	62.133	ENSGAFG00000006203	r3hdm1	95	62.133	Gambusia_affinis
ENSCANG00000034748	R3HDM1	86	68.269	ENSGACG00000014925	r3hdm1	80	68.269	Gasterosteus_aculeatus
ENSCANG00000034748	R3HDM1	99	83.662	ENSGAGG00000007840	R3HDM1	100	78.119	Gopherus_agassizii
ENSCANG00000034748	R3HDM1	100	98.547	ENSGGOG00000008156	R3HDM1	100	98.547	Gorilla_gorilla
ENSCANG00000034748	R3HDM1	100	88.918	ENSHGLG00000015718	R3HDM1	100	89.037	Heterocephalus_glaber_female
ENSCANG00000034748	R3HDM1	100	88.654	ENSHGLG00100003184	-	100	88.704	Heterocephalus_glaber_male
ENSCANG00000034748	R3HDM1	100	68.750	ENSHGLG00100015374	-	100	73.272	Heterocephalus_glaber_male
ENSCANG00000034748	R3HDM1	87	56.373	ENSHCOG00000013366	r3hdm1	91	60.322	Hippocampus_comes
ENSCANG00000034748	R3HDM1	85	67.069	ENSIPUG00000013629	r3hdm1	95	68.868	Ictalurus_punctatus
ENSCANG00000034748	R3HDM1	82	73.668	ENSIPUG00000001676	R3HDM1	99	65.311	Ictalurus_punctatus
ENSCANG00000034748	R3HDM1	100	94.646	ENSSTOG00000007572	R3HDM1	99	96.494	Ictidomys_tridecemlineatus
ENSCANG00000034748	R3HDM1	95	70.551	ENSLACG00000005334	R3HDM1	100	70.962	Latimeria_chalumnae
ENSCANG00000034748	R3HDM1	100	66.195	ENSLOCG00000001641	r3hdm1	100	66.133	Lepisosteus_oculatus
ENSCANG00000034748	R3HDM1	100	90.853	ENSLAFG00000009065	R3HDM1	100	91.029	Loxodonta_africana
ENSCANG00000034748	R3HDM1	100	99.092	ENSMFAG00000030331	R3HDM1	100	99.261	Macaca_fascicularis
ENSCANG00000034748	R3HDM1	100	98.910	ENSMMUG00000009844	R3HDM1	100	98.910	Macaca_mulatta
ENSCANG00000034748	R3HDM1	100	98.910	ENSMNEG00000027793	R3HDM1	100	99.261	Macaca_nemestrina
ENSCANG00000034748	R3HDM1	100	99.183	ENSMLEG00000043189	R3HDM1	100	99.183	Mandrillus_leucophaeus
ENSCANG00000034748	R3HDM1	87	62.198	ENSMAMG00000004532	r3hdm1	93	58.812	Mastacembelus_armatus
ENSCANG00000034748	R3HDM1	87	60.836	ENSMZEG00005003157	r3hdm1	95	58.519	Maylandia_zebra
ENSCANG00000034748	R3HDM1	100	78.339	ENSMGAG00000012461	R3HDM1	100	78.520	Meleagris_gallopavo
ENSCANG00000034748	R3HDM1	100	87.895	ENSMAUG00000010315	R3hdm1	100	90.698	Mesocricetus_auratus
ENSCANG00000034748	R3HDM1	95	92.108	ENSMICG00000042655	-	100	92.108	Microcebus_murinus
ENSCANG00000034748	R3HDM1	100	93.852	ENSMICG00000005900	-	100	93.852	Microcebus_murinus
ENSCANG00000034748	R3HDM1	89	78.469	ENSMODG00000000923	R3HDM1	97	77.588	Monodelphis_domestica
ENSCANG00000034748	R3HDM1	99	58.065	ENSMALG00000009000	r3hdm1	94	57.714	Monopterus_albus
ENSCANG00000034748	R3HDM1	100	86.983	MGP_CAROLIEiJ_G0014543	R3hdm1	100	93.724	Mus_caroli
ENSCANG00000034748	R3HDM1	100	86.983	ENSMUSG00000056211	R3hdm1	100	93.724	Mus_musculus
ENSCANG00000034748	R3HDM1	100	86.895	MGP_PahariEiJ_G0027779	R3hdm1	100	93.724	Mus_pahari
ENSCANG00000034748	R3HDM1	100	87.159	MGP_SPRETEiJ_G0015350	R3hdm1	100	93.724	Mus_spretus
ENSCANG00000034748	R3HDM1	100	94.293	ENSMPUG00000002412	R3HDM1	100	94.475	Mustela_putorius_furo
ENSCANG00000034748	R3HDM1	100	92.948	ENSMLUG00000013824	R3HDM1	100	92.948	Myotis_lucifugus
ENSCANG00000034748	R3HDM1	100	98.638	ENSNLEG00000008622	R3HDM1	100	98.638	Nomascus_leucogenys
ENSCANG00000034748	R3HDM1	89	72.358	ENSMEUG00000011784	R3HDM1	100	72.561	Notamacropus_eugenii
ENSCANG00000034748	R3HDM1	100	87.863	ENSODEG00000008607	R3HDM1	100	89.701	Octodon_degus
ENSCANG00000034748	R3HDM1	94	66.873	ENSONIG00000012017	r3hdm1	91	66.873	Oreochromis_niloticus
ENSCANG00000034748	R3HDM1	100	81.351	ENSOANG00000007987	R3HDM1	100	81.622	Ornithorhynchus_anatinus
ENSCANG00000034748	R3HDM1	89	92.792	ENSOCUG00000017366	R3HDM1	98	93.198	Oryctolagus_cuniculus
ENSCANG00000034748	R3HDM1	87	60.372	ENSORLG00000004297	r3hdm1	90	60.372	Oryzias_latipes
ENSCANG00000034748	R3HDM1	89	60.800	ENSORLG00015017355	r3hdm1	91	60.800	Oryzias_latipes_hsok
ENSCANG00000034748	R3HDM1	100	93.207	ENSOGAG00000003136	R3HDM1	100	93.116	Otolemur_garnettii
ENSCANG00000034748	R3HDM1	100	93.388	ENSOARG00000010788	R3HDM1	100	93.659	Ovis_aries
ENSCANG00000034748	R3HDM1	100	98.730	ENSPPAG00000027858	R3HDM1	100	98.730	Pan_paniscus
ENSCANG00000034748	R3HDM1	100	93.949	ENSPPRG00000002626	R3HDM1	100	94.112	Panthera_pardus
ENSCANG00000034748	R3HDM1	100	93.949	ENSPTIG00000016581	R3HDM1	100	94.112	Panthera_tigris_altaica
ENSCANG00000034748	R3HDM1	100	98.639	ENSPTRG00000012494	R3HDM1	100	98.639	Pan_troglodytes
ENSCANG00000034748	R3HDM1	100	99.183	ENSPANG00000026448	R3HDM1	100	99.183	Papio_anubis
ENSCANG00000034748	R3HDM1	94	76.358	ENSPKIG00000004328	r3hdm1	91	76.508	Paramormyrops_kingsleyae
ENSCANG00000034748	R3HDM1	100	78.771	ENSPSIG00000012915	R3HDM1	100	79.133	Pelodiscus_sinensis
ENSCANG00000034748	R3HDM1	100	88.039	ENSPEMG00000015187	R3hdm1	100	90.365	Peromyscus_maniculatus_bairdii
ENSCANG00000034748	R3HDM1	91	52.941	ENSPMAG00000003369	-	99	43.064	Petromyzon_marinus
ENSCANG00000034748	R3HDM1	100	90.385	ENSPCIG00000002491	R3HDM1	100	83.888	Phascolarctos_cinereus
ENSCANG00000034748	R3HDM1	87	55.474	ENSPFOG00000015036	r3hdm1	93	57.467	Poecilia_formosa
ENSCANG00000034748	R3HDM1	87	59.947	ENSPLAG00000018042	r3hdm1	91	59.947	Poecilia_latipinna
ENSCANG00000034748	R3HDM1	87	59.947	ENSPMEG00000023947	r3hdm1	91	59.947	Poecilia_mexicana
ENSCANG00000034748	R3HDM1	81	68.608	ENSPREG00000007902	r3hdm1	94	60.582	Poecilia_reticulata
ENSCANG00000034748	R3HDM1	100	97.549	ENSPPYG00000012815	R3HDM1	100	97.368	Pongo_abelii
ENSCANG00000034748	R3HDM1	100	81.612	ENSPCAG00000006208	R3HDM1	100	80.978	Procavia_capensis
ENSCANG00000034748	R3HDM1	100	93.821	ENSPCOG00000012698	R3HDM1	100	93.821	Propithecus_coquereli
ENSCANG00000034748	R3HDM1	100	85.598	ENSPVAG00000006098	R3HDM1	100	85.598	Pteropus_vampyrus
ENSCANG00000034748	R3HDM1	94	73.802	ENSPNAG00000013952	r3hdm1	95	69.919	Pygocentrus_nattereri
ENSCANG00000034748	R3HDM1	63	39.492	ENSPNAG00000004162	arpp21	85	39.908	Pygocentrus_nattereri
ENSCANG00000034748	R3HDM1	83	76.603	ENSPNAG00000005436	R3HDM1	99	76.527	Pygocentrus_nattereri
ENSCANG00000034748	R3HDM1	100	86.807	ENSRNOG00000004099	R3hdm1	100	86.544	Rattus_norvegicus
ENSCANG00000034748	R3HDM1	100	98.858	ENSRBIG00000033317	R3HDM1	100	100.000	Rhinopithecus_bieti
ENSCANG00000034748	R3HDM1	100	99.183	ENSRROG00000034534	R3HDM1	100	99.183	Rhinopithecus_roxellana
ENSCANG00000034748	R3HDM1	100	97.548	ENSSBOG00000020389	R3HDM1	100	97.548	Saimiri_boliviensis_boliviensis
ENSCANG00000034748	R3HDM1	100	83.906	ENSSHAG00000016999	R3HDM1	100	84.087	Sarcophilus_harrisii
ENSCANG00000034748	R3HDM1	93	70.843	ENSSFOG00015014134	r3hdm1	100	70.773	Scleropages_formosus
ENSCANG00000034748	R3HDM1	100	56.256	ENSSFOG00015019851	-	100	55.911	Scleropages_formosus
ENSCANG00000034748	R3HDM1	99	60.811	ENSSMAG00000001669	r3hdm1	94	60.811	Scophthalmus_maximus
ENSCANG00000034748	R3HDM1	87	62.500	ENSSDUG00000010749	r3hdm1	91	62.500	Seriola_dumerili
ENSCANG00000034748	R3HDM1	92	69.231	ENSSLDG00000004499	r3hdm1	83	69.231	Seriola_lalandi_dorsalis
ENSCANG00000034748	R3HDM1	74	79.130	ENSSARG00000000352	-	69	82.060	Sorex_araneus
ENSCANG00000034748	R3HDM1	100	80.054	ENSSPUG00000004167	R3HDM1	100	80.144	Sphenodon_punctatus
ENSCANG00000034748	R3HDM1	87	63.200	ENSSPAG00000004648	r3hdm1	91	63.200	Stegastes_partitus
ENSCANG00000034748	R3HDM1	100	96.685	ENSSSCG00000015692	R3HDM1	100	94.746	Sus_scrofa
ENSCANG00000034748	R3HDM1	100	75.616	ENSTGUG00000011750	R3HDM1	100	73.195	Taeniopygia_guttata
ENSCANG00000034748	R3HDM1	81	67.532	ENSTRUG00000011654	r3hdm1	91	57.662	Takifugu_rubripes
ENSCANG00000034748	R3HDM1	87	46.123	ENSTNIG00000010362	r3hdm1	99	45.775	Tetraodon_nigroviridis
ENSCANG00000034748	R3HDM1	100	87.307	ENSTTRG00000003935	R3HDM1	100	87.681	Tursiops_truncatus
ENSCANG00000034748	R3HDM1	70	94.723	ENSUAMG00000024806	R3HDM1	94	94.563	Ursus_americanus
ENSCANG00000034748	R3HDM1	100	93.744	ENSUMAG00000005552	R3HDM1	100	93.846	Ursus_maritimus
ENSCANG00000034748	R3HDM1	97	94.118	ENSVPAG00000007333	R3HDM1	93	89.588	Vicugna_pacos
ENSCANG00000034748	R3HDM1	100	96.961	ENSVVUG00000006457	R3HDM1	100	91.725	Vulpes_vulpes
ENSCANG00000034748	R3HDM1	90	67.505	ENSXETG00000019330	r3hdm1	100	67.304	Xenopus_tropicalis
ENSCANG00000034748	R3HDM1	67	50.128	ENSXCOG00000017448	r3hdm1	94	49.680	Xiphophorus_couchianus
ENSCANG00000034748	R3HDM1	81	68.285	ENSXMAG00000007885	r3hdm1	88	61.600	Xiphophorus_maculatus