EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCANG00000034900 (Gene tree)
Gene ID: 105506193
Gene Symbol: -
Alias: -
Full Name: pre-mRNA processing factor 18
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Plus strand
Length: 43807 bases
Position: chrKN979752.1:2270326-2314132
Accession: 105506193
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000022977	PRP4	PF08799.11	1.4e-13	1	1
ENSCANP00000023002	PRP4	PF08799.11	1.5e-13	1	1
ENSCANP00000022977	Prp18	PF02840.15	1.7e-62	1	1
ENSCANP00000023002	Prp18	PF02840.15	2.1e-62	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000045961	-	1823	XM_011934239	ENSCANP00000022977	342 (aa)	XP_011789629	A0A2K5J2H9
ENSCANT00000045988	-	1056	-	ENSCANP00000023002	351 (aa)	-	A0A2K5J2K5

Gene Model

Click here to download ENSCANG00000034900's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000034900's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000034900	-	100	99.708	ENSG00000165630	PRPF18	100	99.708	Homo_sapiens
ENSCANG00000034900	-	100	85.673	ENSAPOG00000024177	prpf18	100	85.673	Acanthochromis_polyacanthus
ENSCANG00000034900	-	100	99.123	ENSAMEG00000013591	-	100	99.123	Ailuropoda_melanoleuca
ENSCANG00000034900	-	100	84.503	ENSACIG00000001186	prpf18	100	84.503	Amphilophus_citrinellus
ENSCANG00000034900	-	98	85.672	ENSAOCG00000006572	prpf18	94	83.965	Amphiprion_ocellaris
ENSCANG00000034900	-	100	85.965	ENSAPEG00000004564	prpf18	100	85.965	Amphiprion_percula
ENSCANG00000034900	-	100	84.503	ENSATEG00000000303	prpf18	100	84.503	Anabas_testudineus
ENSCANG00000034900	-	99	91.176	ENSAPLG00000003387	-	99	91.176	Anas_platyrhynchos
ENSCANG00000034900	-	100	91.570	ENSACAG00000000818	-	100	91.570	Anolis_carolinensis
ENSCANG00000034900	-	100	99.715	ENSANAG00000037445	-	100	99.715	Aotus_nancymaae
ENSCANG00000034900	-	100	85.088	ENSACLG00000026296	prpf18	100	85.088	Astatotilapia_calliptera
ENSCANG00000034900	-	100	84.615	ENSAMXG00000012848	prpf18	100	84.615	Astyanax_mexicanus
ENSCANG00000034900	-	100	98.860	ENSBTAG00000017244	PRPF18	100	98.860	Bos_taurus
ENSCANG00000034900	-	98	38.506	WBGene00009320	F32B6.3	97	38.506	Caenorhabditis_elegans
ENSCANG00000034900	-	100	99.715	ENSCJAG00000009432	-	100	99.715	Callithrix_jacchus
ENSCANG00000034900	-	100	99.123	ENSCAFG00000004735	-	100	99.123	Canis_familiaris
ENSCANG00000034900	-	100	99.123	ENSCAFG00020007712	-	100	99.123	Canis_lupus_dingo
ENSCANG00000034900	-	100	98.860	ENSCHIG00000000499	-	100	98.860	Capra_hircus
ENSCANG00000034900	-	100	98.860	ENSTSYG00000003517	-	100	98.860	Carlito_syrichta
ENSCANG00000034900	-	100	99.708	ENSCPOG00000021069	-	100	99.708	Cavia_porcellus
ENSCANG00000034900	-	100	99.715	ENSCCAG00000036822	-	100	99.715	Cebus_capucinus
ENSCANG00000034900	-	100	88.596	ENSCATG00000016633	-	100	88.596	Cercocebus_atys
ENSCANG00000034900	-	100	98.830	ENSCLAG00000011770	-	100	98.830	Chinchilla_lanigera
ENSCANG00000034900	-	100	99.715	ENSCSAG00000013109	-	100	99.715	Chlorocebus_sabaeus
ENSCANG00000034900	-	100	89.045	ENSCPBG00000003100	-	100	89.607	Chrysemys_picta_bellii
ENSCANG00000034900	-	99	54.706	ENSCING00000020481	-	97	54.706	Ciona_intestinalis
ENSCANG00000034900	-	99	54.335	ENSCSAVG00000010546	-	99	54.360	Ciona_savignyi
ENSCANG00000034900	-	100	99.123	ENSCGRG00001023665	Prpf18	100	99.123	Cricetulus_griseus_chok1gshd
ENSCANG00000034900	-	100	99.123	ENSCGRG00000014690	Prpf18	100	99.123	Cricetulus_griseus_crigri
ENSCANG00000034900	-	100	83.041	ENSCSEG00000005536	prpf18	99	83.041	Cynoglossus_semilaevis
ENSCANG00000034900	-	100	84.503	ENSCVAG00000012401	prpf18	100	84.503	Cyprinodon_variegatus
ENSCANG00000034900	-	100	85.088	ENSDARG00000058306	prpf18	100	85.088	Danio_rerio
ENSCANG00000034900	-	100	98.538	ENSDNOG00000035607	-	100	98.538	Dasypus_novemcinctus
ENSCANG00000034900	-	100	98.830	ENSDORG00000000858	Prpf18	100	98.830	Dipodomys_ordii
ENSCANG00000034900	-	99	51.622	FBgn0027784	Prp18	98	51.327	Drosophila_melanogaster
ENSCANG00000034900	-	100	87.427	ENSETEG00000015060	-	100	87.427	Echinops_telfairi
ENSCANG00000034900	-	100	66.571	ENSEBUG00000016502	prpf18	99	65.706	Eptatretus_burgeri
ENSCANG00000034900	-	100	99.430	ENSEASG00005019373	-	100	99.430	Equus_asinus_asinus
ENSCANG00000034900	-	100	99.430	ENSECAG00000006997	PRPF18	100	99.430	Equus_caballus
ENSCANG00000034900	-	92	62.975	ENSEEUG00000001171	-	100	62.975	Erinaceus_europaeus
ENSCANG00000034900	-	100	82.507	ENSELUG00000022190	prpf18	100	82.507	Esox_lucius
ENSCANG00000034900	-	100	98.860	ENSFCAG00000004436	-	100	98.860	Felis_catus
ENSCANG00000034900	-	93	91.077	ENSFALG00000001912	-	97	91.077	Ficedula_albicollis
ENSCANG00000034900	-	99	64.638	ENSFDAG00000010713	-	97	64.638	Fukomys_damarensis
ENSCANG00000034900	-	94	99.062	ENSFDAG00000014026	-	100	99.062	Fukomys_damarensis
ENSCANG00000034900	-	80	89.377	ENSFHEG00000020125	prpf18	98	89.513	Fundulus_heteroclitus
ENSCANG00000034900	-	99	80.059	ENSGMOG00000012210	prpf18	99	80.059	Gadus_morhua
ENSCANG00000034900	-	100	92.105	ENSGALG00000043593	-	100	92.105	Gallus_gallus
ENSCANG00000034900	-	100	83.333	ENSGAFG00000006034	prpf18	100	83.333	Gambusia_affinis
ENSCANG00000034900	-	100	81.871	ENSGACG00000012232	prpf18	100	81.871	Gasterosteus_aculeatus
ENSCANG00000034900	-	100	92.398	ENSGAGG00000016878	-	100	92.398	Gopherus_agassizii
ENSCANG00000034900	-	93	99.692	ENSGGOG00000025188	-	96	99.692	Gorilla_gorilla
ENSCANG00000034900	-	100	85.088	ENSHBUG00000010264	prpf18	100	85.088	Haplochromis_burtoni
ENSCANG00000034900	-	100	99.123	ENSHGLG00000018534	PRPF18	100	99.123	Heterocephalus_glaber_female
ENSCANG00000034900	-	94	99.375	ENSHGLG00100012161	-	98	99.375	Heterocephalus_glaber_male
ENSCANG00000034900	-	100	84.503	ENSHCOG00000015987	prpf18	100	84.503	Hippocampus_comes
ENSCANG00000034900	-	100	82.153	ENSIPUG00000007432	prpf18	100	83.003	Ictalurus_punctatus
ENSCANG00000034900	-	100	97.953	ENSSTOG00000008735	-	100	97.953	Ictidomys_tridecemlineatus
ENSCANG00000034900	-	100	72.334	ENSJJAG00000015191	-	100	72.334	Jaculus_jaculus
ENSCANG00000034900	-	100	99.708	ENSJJAG00000024041	-	100	99.708	Jaculus_jaculus
ENSCANG00000034900	-	100	83.333	ENSKMAG00000012124	prpf18	100	83.333	Kryptolebias_marmoratus
ENSCANG00000034900	-	99	83.728	ENSLBEG00000028466	prpf18	99	83.728	Labrus_bergylta
ENSCANG00000034900	-	100	86.550	ENSLACG00000009885	prpf18	100	86.550	Latimeria_chalumnae
ENSCANG00000034900	-	100	90.936	ENSLOCG00000016736	prpf18	100	90.936	Lepisosteus_oculatus
ENSCANG00000034900	-	100	99.708	ENSLAFG00000007753	-	100	99.708	Loxodonta_africana
ENSCANG00000034900	-	100	99.715	ENSMFAG00000000540	-	100	99.715	Macaca_fascicularis
ENSCANG00000034900	-	100	99.715	ENSMMUG00000015071	PRPF18	100	99.715	Macaca_mulatta
ENSCANG00000034900	-	100	99.715	ENSMNEG00000024679	-	100	99.715	Macaca_nemestrina
ENSCANG00000034900	-	100	84.503	ENSMLEG00000031715	-	100	84.503	Mandrillus_leucophaeus
ENSCANG00000034900	-	100	83.626	ENSMAMG00000006610	prpf18	100	83.626	Mastacembelus_armatus
ENSCANG00000034900	-	100	85.088	ENSMZEG00005019392	prpf18	100	85.088	Maylandia_zebra
ENSCANG00000034900	-	100	92.105	ENSMGAG00000005023	-	100	92.105	Meleagris_gallopavo
ENSCANG00000034900	-	100	99.430	ENSMICG00000006572	-	100	99.430	Microcebus_murinus
ENSCANG00000034900	-	100	99.708	ENSMOCG00000021468	Prpf18	100	99.708	Microtus_ochrogaster
ENSCANG00000034900	-	100	83.333	ENSMMOG00000013012	prpf18	100	83.333	Mola_mola
ENSCANG00000034900	-	100	85.380	ENSMODG00000024043	-	100	85.380	Monodelphis_domestica
ENSCANG00000034900	-	96	92.899	ENSMODG00000016902	-	92	92.899	Monodelphis_domestica
ENSCANG00000034900	-	100	78.286	ENSMALG00000005486	prpf18	100	78.571	Monopterus_albus
ENSCANG00000034900	-	100	99.123	MGP_CAROLIEiJ_G0023143	Prpf18	100	100.000	Mus_caroli
ENSCANG00000034900	-	100	98.830	ENSMUSG00000039449	Prpf18	100	100.000	Mus_musculus
ENSCANG00000034900	-	100	99.415	MGP_PahariEiJ_G0019203	Prpf18	100	100.000	Mus_pahari
ENSCANG00000034900	-	100	98.538	MGP_SPRETEiJ_G0024061	Prpf18	100	100.000	Mus_spretus
ENSCANG00000034900	-	100	98.830	ENSMPUG00000000938	-	100	98.830	Mustela_putorius_furo
ENSCANG00000034900	-	100	98.830	ENSMLUG00000009200	-	100	98.830	Myotis_lucifugus
ENSCANG00000034900	-	100	99.123	ENSNGAG00000012500	-	100	99.123	Nannospalax_galili
ENSCANG00000034900	-	67	91.739	ENSNGAG00000023550	-	82	91.739	Nannospalax_galili
ENSCANG00000034900	-	100	85.088	ENSNBRG00000001778	prpf18	100	85.088	Neolamprologus_brichardi
ENSCANG00000034900	-	100	99.715	ENSNLEG00000012186	-	100	99.715	Nomascus_leucogenys
ENSCANG00000034900	-	100	65.205	ENSMEUG00000005032	-	100	65.205	Notamacropus_eugenii
ENSCANG00000034900	-	77	81.509	ENSOPRG00000002153	-	100	81.509	Ochotona_princeps
ENSCANG00000034900	-	100	98.830	ENSODEG00000003770	-	100	98.830	Octodon_degus
ENSCANG00000034900	-	98	84.478	ENSONIG00000014854	prpf18	96	84.478	Oreochromis_niloticus
ENSCANG00000034900	-	100	94.444	ENSOANG00000015404	-	100	94.444	Ornithorhynchus_anatinus
ENSCANG00000034900	-	100	99.415	ENSOCUG00000027756	-	100	95.322	Oryctolagus_cuniculus
ENSCANG00000034900	-	100	82.906	ENSORLG00000010293	prpf18	100	82.906	Oryzias_latipes
ENSCANG00000034900	-	100	84.503	ENSORLG00020001530	prpf18	100	84.503	Oryzias_latipes_hni
ENSCANG00000034900	-	100	84.211	ENSORLG00015013705	prpf18	100	84.211	Oryzias_latipes_hsok
ENSCANG00000034900	-	100	85.673	ENSOMEG00000009167	prpf18	100	85.673	Oryzias_melastigma
ENSCANG00000034900	-	100	98.538	ENSOGAG00000007294	-	100	98.538	Otolemur_garnettii
ENSCANG00000034900	-	100	98.860	ENSOARG00000006243	-	100	98.860	Ovis_aries
ENSCANG00000034900	-	100	99.715	ENSPPAG00000041959	-	100	99.715	Pan_paniscus
ENSCANG00000034900	-	100	98.830	ENSPPRG00000000107	-	100	98.830	Panthera_pardus
ENSCANG00000034900	-	100	98.538	ENSPTIG00000021094	-	100	98.538	Panthera_tigris_altaica
ENSCANG00000034900	-	100	99.715	ENSPTRG00000002306	PRPF18	100	99.715	Pan_troglodytes
ENSCANG00000034900	-	100	99.430	ENSPANG00000023346	-	100	99.430	Papio_anubis
ENSCANG00000034900	-	86	98.113	ENSPKIG00000014128	prpf18	96	83.476	Paramormyrops_kingsleyae
ENSCANG00000034900	-	100	92.690	ENSPSIG00000016064	-	100	92.690	Pelodiscus_sinensis
ENSCANG00000034900	-	100	78.655	ENSPMGG00000016486	prpf18	100	78.655	Periophthalmus_magnuspinnatus
ENSCANG00000034900	-	100	99.415	ENSPEMG00000013704	Prpf18	100	99.415	Peromyscus_maniculatus_bairdii
ENSCANG00000034900	-	100	74.277	ENSPMAG00000000204	prpf18	100	74.277	Petromyzon_marinus
ENSCANG00000034900	-	93	96.308	ENSPCIG00000012963	-	99	96.519	Phascolarctos_cinereus
ENSCANG00000034900	-	100	82.051	ENSPFOG00000017611	prpf18	100	82.051	Poecilia_formosa
ENSCANG00000034900	-	100	83.626	ENSPLAG00000000369	prpf18	100	83.626	Poecilia_latipinna
ENSCANG00000034900	-	100	83.626	ENSPMEG00000005183	prpf18	100	83.626	Poecilia_mexicana
ENSCANG00000034900	-	100	83.041	ENSPREG00000015232	prpf18	100	83.041	Poecilia_reticulata
ENSCANG00000034900	-	100	99.415	ENSPPYG00000002101	PRPF18	100	99.415	Pongo_abelii
ENSCANG00000034900	-	100	80.702	ENSPCAG00000010833	-	100	80.702	Procavia_capensis
ENSCANG00000034900	-	100	92.105	ENSPCOG00000013057	-	100	92.105	Propithecus_coquereli
ENSCANG00000034900	-	100	61.111	ENSPVAG00000002947	-	100	61.111	Pteropus_vampyrus
ENSCANG00000034900	-	100	85.088	ENSPNYG00000003554	prpf18	100	85.088	Pundamilia_nyererei
ENSCANG00000034900	-	100	85.755	ENSPNAG00000023151	prpf18	100	85.755	Pygocentrus_nattereri
ENSCANG00000034900	-	100	98.830	ENSRNOG00000018396	Prpf18	100	98.830	Rattus_norvegicus
ENSCANG00000034900	-	100	99.715	ENSRBIG00000028028	-	100	99.715	Rhinopithecus_bieti
ENSCANG00000034900	-	100	100.000	ENSRROG00000040695	-	100	100.000	Rhinopithecus_roxellana
ENSCANG00000034900	-	100	99.715	ENSSBOG00000034482	-	100	99.715	Saimiri_boliviensis_boliviensis
ENSCANG00000034900	-	100	96.491	ENSSHAG00000016463	-	100	96.491	Sarcophilus_harrisii
ENSCANG00000034900	-	100	77.193	ENSSHAG00000009669	-	100	77.193	Sarcophilus_harrisii
ENSCANG00000034900	-	98	83.188	ENSSFOG00015022118	prpf18	100	77.233	Scleropages_formosus
ENSCANG00000034900	-	77	44.528	ENSSFOG00015021154	-	89	48.927	Scleropages_formosus
ENSCANG00000034900	-	100	83.333	ENSSMAG00000005308	prpf18	100	83.333	Scophthalmus_maximus
ENSCANG00000034900	-	100	85.380	ENSSDUG00000015428	prpf18	100	85.380	Seriola_dumerili
ENSCANG00000034900	-	100	85.380	ENSSLDG00000023989	prpf18	100	85.380	Seriola_lalandi_dorsalis
ENSCANG00000034900	-	100	68.713	ENSSARG00000005307	-	100	68.713	Sorex_araneus
ENSCANG00000034900	-	100	92.690	ENSSPUG00000002619	-	100	92.690	Sphenodon_punctatus
ENSCANG00000034900	-	100	84.795	ENSSPAG00000019502	prpf18	100	84.795	Stegastes_partitus
ENSCANG00000034900	-	100	99.145	ENSSSCG00000026354	-	100	99.145	Sus_scrofa
ENSCANG00000034900	-	100	92.105	ENSTGUG00000002286	-	100	92.105	Taeniopygia_guttata
ENSCANG00000034900	-	100	82.456	ENSTRUG00000011278	prpf18	100	82.456	Takifugu_rubripes
ENSCANG00000034900	-	100	82.164	ENSTNIG00000000911	prpf18	100	82.164	Tetraodon_nigroviridis
ENSCANG00000034900	-	80	100.000	ENSTBEG00000013011	-	79	100.000	Tupaia_belangeri
ENSCANG00000034900	-	100	99.415	ENSTTRG00000011117	PRPF18	100	99.415	Tursiops_truncatus
ENSCANG00000034900	-	95	96.000	ENSUAMG00000001815	-	94	96.000	Ursus_americanus
ENSCANG00000034900	-	100	94.152	ENSUMAG00000012329	-	100	94.152	Ursus_maritimus
ENSCANG00000034900	-	100	93.567	ENSVPAG00000011486	-	100	93.567	Vicugna_pacos
ENSCANG00000034900	-	100	99.145	ENSVVUG00000005453	-	100	99.145	Vulpes_vulpes
ENSCANG00000034900	-	100	80.290	ENSXETG00000024057	prpf18	100	80.290	Xenopus_tropicalis
ENSCANG00000034900	-	100	82.849	ENSXCOG00000020414	prpf18	100	82.849	Xiphophorus_couchianus
ENSCANG00000034900	-	100	83.333	ENSXMAG00000004713	prpf18	91	83.333	Xiphophorus_maculatus