EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCANG00000035214 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Minus strand
Length: 570 bases
Position: chrKN979952.1:1199671-1200240
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000023614	LSM	PF01423.22	3.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000046603	-	216	-	ENSCANP00000023614	71 (aa)	-	A0A2K5J3X6

Gene Model

Click here to download ENSCANG00000035214's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000035214's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCANG00000035214	-	100	71.250	ENSCANG00000006849	-	100	71.250
ENSCANG00000035214	-	87	42.424	ENSCANG00000006758	-	73	42.424
ENSCANG00000035214	-	100	71.250	ENSCANG00000041263	-	100	71.250

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000035214	-	100	71.250	ENSG00000164167	LSM6	100	71.250	Homo_sapiens
ENSCANG00000035214	-	100	68.750	ENSAPOG00000019832	lsm6	100	68.750	Acanthochromis_polyacanthus
ENSCANG00000035214	-	100	71.250	ENSAMEG00000016671	LSM6	100	71.250	Ailuropoda_melanoleuca
ENSCANG00000035214	-	100	68.750	ENSACIG00000016711	lsm6	100	68.750	Amphilophus_citrinellus
ENSCANG00000035214	-	100	68.750	ENSAOCG00000002110	lsm6	52	68.750	Amphiprion_ocellaris
ENSCANG00000035214	-	100	68.750	ENSAPEG00000023992	lsm6	100	68.750	Amphiprion_percula
ENSCANG00000035214	-	100	68.750	ENSATEG00000012610	lsm6	100	68.750	Anabas_testudineus
ENSCANG00000035214	-	96	70.130	ENSAPLG00000012594	LSM6	99	70.130	Anas_platyrhynchos
ENSCANG00000035214	-	100	71.250	ENSACAG00000004004	LSM6	100	71.250	Anolis_carolinensis
ENSCANG00000035214	-	100	71.250	ENSANAG00000030568	-	100	71.250	Aotus_nancymaae
ENSCANG00000035214	-	100	70.667	ENSANAG00000021839	-	100	70.667	Aotus_nancymaae
ENSCANG00000035214	-	100	68.750	ENSACLG00000025621	lsm6	100	68.750	Astatotilapia_calliptera
ENSCANG00000035214	-	100	70.000	ENSAMXG00000038738	lsm6	100	70.000	Astyanax_mexicanus
ENSCANG00000035214	-	100	67.500	ENSBTAG00000052085	-	100	67.500	Bos_taurus
ENSCANG00000035214	-	100	71.250	ENSBTAG00000014060	LSM6	100	71.250	Bos_taurus
ENSCANG00000035214	-	76	65.517	WBGene00003080	lsm-6	75	65.517	Caenorhabditis_elegans
ENSCANG00000035214	-	100	71.250	ENSCJAG00000002482	LSM6	100	71.250	Callithrix_jacchus
ENSCANG00000035214	-	100	71.250	ENSCAFG00000007738	LSM6	100	71.250	Canis_familiaris
ENSCANG00000035214	-	100	71.250	ENSCAFG00020025902	LSM6	100	71.250	Canis_lupus_dingo
ENSCANG00000035214	-	100	71.250	ENSCHIG00000010334	-	100	71.250	Capra_hircus
ENSCANG00000035214	-	100	64.474	ENSCHIG00000024198	-	95	64.474	Capra_hircus
ENSCANG00000035214	-	80	81.967	ENSCHIG00000012864	-	86	81.967	Capra_hircus
ENSCANG00000035214	-	100	71.250	ENSTSYG00000026972	LSM6	100	71.250	Carlito_syrichta
ENSCANG00000035214	-	89	68.657	ENSTSYG00000012759	-	84	68.657	Carlito_syrichta
ENSCANG00000035214	-	80	80.328	ENSCAPG00000011179	-	94	80.328	Cavia_aperea
ENSCANG00000035214	-	100	71.250	ENSCAPG00000008104	LSM6	100	71.250	Cavia_aperea
ENSCANG00000035214	-	100	71.250	ENSCPOG00000032655	LSM6	100	71.250	Cavia_porcellus
ENSCANG00000035214	-	100	71.250	ENSCCAG00000036437	LSM6	100	71.250	Cebus_capucinus
ENSCANG00000035214	-	99	69.620	ENSCCAG00000020665	-	99	69.620	Cebus_capucinus
ENSCANG00000035214	-	100	90.141	ENSCATG00000038799	-	100	90.141	Cercocebus_atys
ENSCANG00000035214	-	100	71.250	ENSCATG00000002770	-	100	71.250	Cercocebus_atys
ENSCANG00000035214	-	100	71.250	ENSCLAG00000005495	LSM6	100	71.250	Chinchilla_lanigera
ENSCANG00000035214	-	76	68.966	ENSCLAG00000005685	-	83	68.966	Chinchilla_lanigera
ENSCANG00000035214	-	100	71.250	ENSCSAG00000003421	LSM6	100	71.250	Chlorocebus_sabaeus
ENSCANG00000035214	-	100	66.667	ENSCHOG00000003420	LSM6	100	66.667	Choloepus_hoffmanni
ENSCANG00000035214	-	100	71.250	ENSCPBG00000027472	LSM6	84	71.250	Chrysemys_picta_bellii
ENSCANG00000035214	-	94	67.105	ENSCING00000019152	-	93	67.105	Ciona_intestinalis
ENSCANG00000035214	-	94	68.421	ENSCSAVG00000002065	-	93	68.421	Ciona_savignyi
ENSCANG00000035214	-	100	71.250	ENSCGRG00001017142	Lsm6	100	71.250	Cricetulus_griseus_chok1gshd
ENSCANG00000035214	-	100	71.250	ENSCGRG00000008320	Lsm6	100	71.250	Cricetulus_griseus_crigri
ENSCANG00000035214	-	100	68.750	ENSCSEG00000000423	lsm6	100	68.750	Cynoglossus_semilaevis
ENSCANG00000035214	-	100	68.750	ENSCVAG00000001592	lsm6	100	68.750	Cyprinodon_variegatus
ENSCANG00000035214	-	100	70.000	ENSDARG00000036995	lsm6	100	70.000	Danio_rerio
ENSCANG00000035214	-	100	71.250	ENSDNOG00000044848	-	100	71.250	Dasypus_novemcinctus
ENSCANG00000035214	-	80	81.967	ENSDNOG00000040186	-	66	81.967	Dasypus_novemcinctus
ENSCANG00000035214	-	100	71.250	ENSDORG00000000933	Lsm6	100	71.250	Dipodomys_ordii
ENSCANG00000035214	-	96	58.442	FBgn0034564	CG9344	97	58.442	Drosophila_melanogaster
ENSCANG00000035214	-	55	58.333	ENSETEG00000013098	LSM6	100	58.333	Echinops_telfairi
ENSCANG00000035214	-	100	70.000	ENSEBUG00000017073	lsm6	100	70.000	Eptatretus_burgeri
ENSCANG00000035214	-	80	81.967	ENSEASG00005001533	LSM6	64	81.967	Equus_asinus_asinus
ENSCANG00000035214	-	100	71.250	ENSECAG00000021036	LSM6	100	71.250	Equus_caballus
ENSCANG00000035214	-	99	46.835	ENSEEUG00000002101	LSM6	100	46.835	Erinaceus_europaeus
ENSCANG00000035214	-	100	70.000	ENSELUG00000014301	LSM6	100	70.000	Esox_lucius
ENSCANG00000035214	-	100	71.250	ENSFCAG00000003047	LSM6	100	71.250	Felis_catus
ENSCANG00000035214	-	100	71.250	ENSFALG00000005509	LSM6	92	71.250	Ficedula_albicollis
ENSCANG00000035214	-	100	67.500	ENSFDAG00000019073	-	100	67.500	Fukomys_damarensis
ENSCANG00000035214	-	100	71.250	ENSFDAG00000020913	-	100	71.250	Fukomys_damarensis
ENSCANG00000035214	-	100	68.750	ENSFHEG00000007948	lsm6	100	68.750	Fundulus_heteroclitus
ENSCANG00000035214	-	100	68.750	ENSGMOG00000015550	lsm6	100	68.750	Gadus_morhua
ENSCANG00000035214	-	100	71.250	ENSGALG00000009985	LSM6	100	71.250	Gallus_gallus
ENSCANG00000035214	-	100	68.750	ENSGAFG00000017763	lsm6	100	68.750	Gambusia_affinis
ENSCANG00000035214	-	99	69.620	ENSGACG00000017223	lsm6	99	69.620	Gasterosteus_aculeatus
ENSCANG00000035214	-	100	71.250	ENSGAGG00000020980	LSM6	100	71.250	Gopherus_agassizii
ENSCANG00000035214	-	100	71.250	ENSGGOG00000001310	LSM6	100	71.250	Gorilla_gorilla
ENSCANG00000035214	-	100	68.750	ENSHBUG00000008618	lsm6	100	68.750	Haplochromis_burtoni
ENSCANG00000035214	-	100	71.250	ENSHGLG00000000205	LSM6	100	71.250	Heterocephalus_glaber_female
ENSCANG00000035214	-	100	71.250	ENSHGLG00100014341	LSM6	100	71.250	Heterocephalus_glaber_male
ENSCANG00000035214	-	100	68.750	ENSHCOG00000005591	lsm6	100	68.750	Hippocampus_comes
ENSCANG00000035214	-	100	68.750	ENSIPUG00000004508	lsm6	100	68.750	Ictalurus_punctatus
ENSCANG00000035214	-	100	71.250	ENSSTOG00000002678	LSM6	100	71.250	Ictidomys_tridecemlineatus
ENSCANG00000035214	-	100	71.250	ENSJJAG00000013845	-	100	71.250	Jaculus_jaculus
ENSCANG00000035214	-	96	57.143	ENSJJAG00000016942	-	97	57.143	Jaculus_jaculus
ENSCANG00000035214	-	100	67.500	ENSJJAG00000011211	-	100	67.500	Jaculus_jaculus
ENSCANG00000035214	-	100	68.750	ENSKMAG00000004105	lsm6	100	68.750	Kryptolebias_marmoratus
ENSCANG00000035214	-	100	68.750	ENSLBEG00000018441	lsm6	100	68.750	Labrus_bergylta
ENSCANG00000035214	-	100	71.250	ENSLACG00000006937	LSM6	100	71.250	Latimeria_chalumnae
ENSCANG00000035214	-	100	68.750	ENSLOCG00000017683	-	100	68.750	Lepisosteus_oculatus
ENSCANG00000035214	-	100	70.000	ENSLOCG00000008852	lsm6	100	70.000	Lepisosteus_oculatus
ENSCANG00000035214	-	100	71.250	ENSLAFG00000001952	LSM6	100	71.250	Loxodonta_africana
ENSCANG00000035214	-	100	71.250	ENSMFAG00000033073	LSM6	100	71.250	Macaca_fascicularis
ENSCANG00000035214	-	100	90.141	ENSMNEG00000040412	-	100	90.141	Macaca_nemestrina
ENSCANG00000035214	-	100	71.250	ENSMNEG00000034820	-	100	71.250	Macaca_nemestrina
ENSCANG00000035214	-	100	71.250	ENSMLEG00000035153	LSM6	100	71.250	Mandrillus_leucophaeus
ENSCANG00000035214	-	100	68.750	ENSMAMG00000014029	lsm6	100	68.750	Mastacembelus_armatus
ENSCANG00000035214	-	100	68.750	ENSMZEG00005009146	lsm6	100	68.750	Maylandia_zebra
ENSCANG00000035214	-	100	71.250	ENSMGAG00000003802	LSM6	100	71.250	Meleagris_gallopavo
ENSCANG00000035214	-	100	71.250	ENSMAUG00000014938	Lsm6	100	71.250	Mesocricetus_auratus
ENSCANG00000035214	-	80	81.967	ENSMICG00000047411	-	72	81.967	Microcebus_murinus
ENSCANG00000035214	-	100	71.250	ENSMICG00000042599	LSM6	100	71.250	Microcebus_murinus
ENSCANG00000035214	-	100	71.250	ENSMOCG00000020049	Lsm6	100	71.250	Microtus_ochrogaster
ENSCANG00000035214	-	100	68.750	ENSMMOG00000005470	lsm6	100	68.750	Mola_mola
ENSCANG00000035214	-	80	78.689	ENSMMOG00000007379	-	77	78.689	Mola_mola
ENSCANG00000035214	-	100	71.250	ENSMODG00000000526	LSM6	100	71.250	Monodelphis_domestica
ENSCANG00000035214	-	100	68.750	ENSMALG00000002419	lsm6	100	68.750	Monopterus_albus
ENSCANG00000035214	-	100	71.250	MGP_CAROLIEiJ_G0031245	Lsm6	100	71.250	Mus_caroli
ENSCANG00000035214	-	100	71.250	ENSMUSG00000031683	Lsm6	100	71.250	Mus_musculus
ENSCANG00000035214	-	100	71.250	MGP_PahariEiJ_G0022851	Lsm6	100	71.250	Mus_pahari
ENSCANG00000035214	-	100	71.250	MGP_SPRETEiJ_G0032365	Lsm6	100	71.250	Mus_spretus
ENSCANG00000035214	-	99	70.886	ENSMPUG00000006936	LSM6	92	70.886	Mustela_putorius_furo
ENSCANG00000035214	-	100	71.250	ENSMLUG00000026355	LSM6	100	71.250	Myotis_lucifugus
ENSCANG00000035214	-	100	71.250	ENSNGAG00000019116	Lsm6	100	71.250	Nannospalax_galili
ENSCANG00000035214	-	100	68.750	ENSNBRG00000004887	lsm6	100	68.750	Neolamprologus_brichardi
ENSCANG00000035214	-	100	71.250	ENSNLEG00000005584	LSM6	100	71.250	Nomascus_leucogenys
ENSCANG00000035214	-	100	74.684	ENSOPRG00000011199	LSM6	100	74.684	Ochotona_princeps
ENSCANG00000035214	-	100	68.750	ENSODEG00000019419	-	100	68.750	Octodon_degus
ENSCANG00000035214	-	100	70.000	ENSODEG00000020420	-	100	70.000	Octodon_degus
ENSCANG00000035214	-	80	72.131	ENSODEG00000018684	-	79	72.131	Octodon_degus
ENSCANG00000035214	-	100	71.250	ENSODEG00000002307	-	100	71.250	Octodon_degus
ENSCANG00000035214	-	100	68.750	ENSONIG00000010005	lsm6	100	68.750	Oreochromis_niloticus
ENSCANG00000035214	-	97	48.718	ENSOANG00000006894	-	100	48.718	Ornithorhynchus_anatinus
ENSCANG00000035214	-	97	48.718	ENSOANG00000006895	-	100	48.718	Ornithorhynchus_anatinus
ENSCANG00000035214	-	100	67.500	ENSORLG00000024158	lsm6	100	67.500	Oryzias_latipes
ENSCANG00000035214	-	100	67.500	ENSORLG00020017383	lsm6	100	67.500	Oryzias_latipes_hni
ENSCANG00000035214	-	100	67.500	ENSORLG00015016903	lsm6	100	67.500	Oryzias_latipes_hsok
ENSCANG00000035214	-	100	68.750	ENSOMEG00000000074	lsm6	100	68.750	Oryzias_melastigma
ENSCANG00000035214	-	100	71.250	ENSOGAG00000026665	-	100	71.250	Otolemur_garnettii
ENSCANG00000035214	-	100	71.250	ENSOGAG00000033153	-	100	71.250	Otolemur_garnettii
ENSCANG00000035214	-	99	67.089	ENSOARG00000011641	-	92	67.089	Ovis_aries
ENSCANG00000035214	-	80	81.967	ENSOARG00000008509	-	78	81.967	Ovis_aries
ENSCANG00000035214	-	100	71.250	ENSPPAG00000037929	LSM6	100	71.250	Pan_paniscus
ENSCANG00000035214	-	100	71.250	ENSPPRG00000012806	LSM6	100	71.250	Panthera_pardus
ENSCANG00000035214	-	100	71.250	ENSPTIG00000019769	LSM6	100	71.250	Panthera_tigris_altaica
ENSCANG00000035214	-	100	71.250	ENSPTRG00000016488	LSM6	100	71.250	Pan_troglodytes
ENSCANG00000035214	-	100	71.250	ENSPANG00000006552	LSM6	100	71.250	Papio_anubis
ENSCANG00000035214	-	100	70.000	ENSPKIG00000016176	lsm6	100	70.000	Paramormyrops_kingsleyae
ENSCANG00000035214	-	100	71.250	ENSPSIG00000016942	LSM6	100	71.250	Pelodiscus_sinensis
ENSCANG00000035214	-	100	68.750	ENSPMGG00000018004	lsm6	100	68.750	Periophthalmus_magnuspinnatus
ENSCANG00000035214	-	100	71.250	ENSPEMG00000012410	Lsm6	100	71.250	Peromyscus_maniculatus_bairdii
ENSCANG00000035214	-	100	70.000	ENSPMAG00000006949	lsm6	100	70.000	Petromyzon_marinus
ENSCANG00000035214	-	100	71.250	ENSPCIG00000023469	LSM6	71	81.967	Phascolarctos_cinereus
ENSCANG00000035214	-	100	68.750	ENSPFOG00000008881	lsm6	100	68.750	Poecilia_formosa
ENSCANG00000035214	-	100	68.750	ENSPLAG00000003202	lsm6	100	68.750	Poecilia_latipinna
ENSCANG00000035214	-	100	68.750	ENSPMEG00000004000	lsm6	100	68.750	Poecilia_mexicana
ENSCANG00000035214	-	100	68.750	ENSPREG00000023235	lsm6	100	68.750	Poecilia_reticulata
ENSCANG00000035214	-	100	71.250	ENSPPYG00000015105	LSM6	100	71.250	Pongo_abelii
ENSCANG00000035214	-	100	71.250	ENSPCOG00000013899	LSM6	100	71.250	Propithecus_coquereli
ENSCANG00000035214	-	100	68.750	ENSPNYG00000012614	lsm6	100	68.750	Pundamilia_nyererei
ENSCANG00000035214	-	100	70.000	ENSPNAG00000018779	lsm6	100	70.000	Pygocentrus_nattereri
ENSCANG00000035214	-	100	71.250	ENSRNOG00000030374	Lsm6	100	71.250	Rattus_norvegicus
ENSCANG00000035214	-	100	71.250	ENSRNOG00000049370	LOC100360750	100	71.250	Rattus_norvegicus
ENSCANG00000035214	-	100	71.250	ENSRBIG00000027878	LSM6	100	71.250	Rhinopithecus_bieti
ENSCANG00000035214	-	100	71.250	ENSRROG00000024868	LSM6	100	71.250	Rhinopithecus_roxellana
ENSCANG00000035214	-	100	53.750	ENSSBOG00000028103	-	100	53.750	Saimiri_boliviensis_boliviensis
ENSCANG00000035214	-	100	71.250	ENSSBOG00000021229	-	100	71.250	Saimiri_boliviensis_boliviensis
ENSCANG00000035214	-	100	70.000	ENSSFOG00015016480	lsm6	100	70.000	Scleropages_formosus
ENSCANG00000035214	-	100	68.750	ENSSMAG00000004550	lsm6	100	68.750	Scophthalmus_maximus
ENSCANG00000035214	-	100	68.750	ENSSDUG00000020459	lsm6	50	68.750	Seriola_dumerili
ENSCANG00000035214	-	100	68.750	ENSSLDG00000020533	lsm6	83	68.750	Seriola_lalandi_dorsalis
ENSCANG00000035214	-	80	81.967	ENSSLDG00000004136	-	53	81.967	Seriola_lalandi_dorsalis
ENSCANG00000035214	-	55	58.333	ENSSARG00000000689	LSM6	100	58.333	Sorex_araneus
ENSCANG00000035214	-	100	71.250	ENSSPUG00000008657	LSM6	100	71.250	Sphenodon_punctatus
ENSCANG00000035214	-	100	68.750	ENSSPAG00000003246	lsm6	100	68.750	Stegastes_partitus
ENSCANG00000035214	-	100	71.250	ENSSSCG00000035973	LSM6	100	71.250	Sus_scrofa
ENSCANG00000035214	-	100	71.250	ENSTGUG00000002663	LSM6	100	71.250	Taeniopygia_guttata
ENSCANG00000035214	-	100	68.750	ENSTRUG00000023398	lsm6	100	68.750	Takifugu_rubripes
ENSCANG00000035214	-	100	68.750	ENSTNIG00000017725	lsm6	100	68.750	Tetraodon_nigroviridis
ENSCANG00000035214	-	100	71.250	ENSTTRG00000004609	LSM6	100	71.250	Tursiops_truncatus
ENSCANG00000035214	-	80	81.967	ENSUAMG00000014213	LSM6	50	81.967	Ursus_americanus
ENSCANG00000035214	-	80	81.967	ENSUMAG00000015727	LSM6	50	81.967	Ursus_maritimus
ENSCANG00000035214	-	100	71.250	ENSVPAG00000006922	LSM6	100	71.250	Vicugna_pacos
ENSCANG00000035214	-	100	71.250	ENSVVUG00000009254	LSM6	68	71.250	Vulpes_vulpes
ENSCANG00000035214	-	100	71.250	ENSXETG00000023683	lsm6	100	71.250	Xenopus_tropicalis
ENSCANG00000035214	-	100	68.750	ENSXMAG00000009606	lsm6	100	68.750	Xiphophorus_maculatus