EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCANG00000035636 (Gene tree)
Gene ID: 105524151
Gene Symbol: PTCD2
Alias: FLJ12598
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Minus strand
Length: 34943 bases
Position: chrKN983625.1:7694106-7729048
Accession: 105524151
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000024461	MRP-S27	PF10037.9	1.9e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000047452	PTCD2-201	1910	XM_011959291	ENSCANP00000024454	216 (aa)	XP_011814681	A0A2K5J6B8
ENSCANT00000047462	PTCD2-203	1774	XM_011959289	ENSCANP00000024464	279 (aa)	XP_011814679	A0A2K5J6D0
ENSCANT00000047459	PTCD2-202	2101	XM_011959288	ENSCANP00000024461	388 (aa)	XP_011814678	A0A2K5J6S8

Gene Model

Click here to download ENSCANG00000035636's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000035636's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000035636	PTCD2	100	90.722	ENSG00000049883	PTCD2	100	90.722	Homo_sapiens
ENSCANG00000035636	PTCD2	96	46.933	ENSAPOG00000020682	ptcd2	97	46.933	Acanthochromis_polyacanthus
ENSCANG00000035636	PTCD2	100	76.031	ENSAMEG00000007194	PTCD2	100	76.031	Ailuropoda_melanoleuca
ENSCANG00000035636	PTCD2	89	41.834	ENSACIG00000002053	ptcd2	100	41.834	Amphilophus_citrinellus
ENSCANG00000035636	PTCD2	96	46.400	ENSAOCG00000006616	ptcd2	96	46.400	Amphiprion_ocellaris
ENSCANG00000035636	PTCD2	96	46.400	ENSAPEG00000022926	ptcd2	96	46.400	Amphiprion_percula
ENSCANG00000035636	PTCD2	98	57.218	ENSACAG00000009747	PTCD2	97	57.218	Anolis_carolinensis
ENSCANG00000035636	PTCD2	100	87.371	ENSANAG00000029353	PTCD2	100	87.371	Aotus_nancymaae
ENSCANG00000035636	PTCD2	96	44.533	ENSACLG00000027742	ptcd2	96	44.533	Astatotilapia_calliptera
ENSCANG00000035636	PTCD2	85	44.242	ENSAMXG00000029404	ptcd2	88	44.242	Astyanax_mexicanus
ENSCANG00000035636	PTCD2	99	80.208	ENSBTAG00000014675	PTCD2	100	80.208	Bos_taurus
ENSCANG00000035636	PTCD2	100	86.082	ENSCJAG00000016364	PTCD2	100	86.082	Callithrix_jacchus
ENSCANG00000035636	PTCD2	99	75.584	ENSCAFG00000007982	PTCD2	90	75.584	Canis_familiaris
ENSCANG00000035636	PTCD2	89	78.035	ENSCAFG00020019147	PTCD2	97	78.035	Canis_lupus_dingo
ENSCANG00000035636	PTCD2	99	80.729	ENSCHIG00000017118	PTCD2	100	80.729	Capra_hircus
ENSCANG00000035636	PTCD2	99	75.718	ENSCPOG00000040168	PTCD2	100	75.718	Cavia_porcellus
ENSCANG00000035636	PTCD2	100	85.825	ENSCCAG00000029389	-	100	85.825	Cebus_capucinus
ENSCANG00000035636	PTCD2	81	81.470	ENSCCAG00000021996	-	98	79.624	Cebus_capucinus
ENSCANG00000035636	PTCD2	99	94.778	ENSCATG00000019069	PTCD2	100	94.778	Cercocebus_atys
ENSCANG00000035636	PTCD2	99	73.890	ENSCLAG00000000072	PTCD2	100	73.890	Chinchilla_lanigera
ENSCANG00000035636	PTCD2	99	95.822	ENSCSAG00000015623	PTCD2	100	95.822	Chlorocebus_sabaeus
ENSCANG00000035636	PTCD2	89	58.908	ENSCHOG00000010634	PTCD2	100	58.908	Choloepus_hoffmanni
ENSCANG00000035636	PTCD2	99	54.805	ENSCPBG00000000216	PTCD2	98	54.805	Chrysemys_picta_bellii
ENSCANG00000035636	PTCD2	99	72.798	ENSCGRG00001015289	Ptcd2	84	72.798	Cricetulus_griseus_chok1gshd
ENSCANG00000035636	PTCD2	99	72.798	ENSCGRG00000006193	Ptcd2	84	72.798	Cricetulus_griseus_crigri
ENSCANG00000035636	PTCD2	96	45.187	ENSCVAG00000001285	ptcd2	95	45.187	Cyprinodon_variegatus
ENSCANG00000035636	PTCD2	98	44.764	ENSDARG00000035391	ptcd2	99	44.764	Danio_rerio
ENSCANG00000035636	PTCD2	99	75.718	ENSDNOG00000008719	PTCD2	100	75.718	Dasypus_novemcinctus
ENSCANG00000035636	PTCD2	99	77.519	ENSDORG00000004921	Ptcd2	100	77.519	Dipodomys_ordii
ENSCANG00000035636	PTCD2	99	67.268	ENSETEG00000016542	PTCD2	99	67.268	Echinops_telfairi
ENSCANG00000035636	PTCD2	99	79.634	ENSEASG00005018038	PTCD2	100	79.634	Equus_asinus_asinus
ENSCANG00000035636	PTCD2	100	79.177	ENSECAG00000007022	PTCD2	100	79.177	Equus_caballus
ENSCANG00000035636	PTCD2	99	72.396	ENSEEUG00000014031	PTCD2	99	72.396	Erinaceus_europaeus
ENSCANG00000035636	PTCD2	90	52.137	ENSELUG00000003584	ptcd2	91	52.137	Esox_lucius
ENSCANG00000035636	PTCD2	99	72.093	ENSFCAG00000045432	PTCD2	83	72.093	Felis_catus
ENSCANG00000035636	PTCD2	84	53.211	ENSFALG00000010299	PTCD2	99	53.211	Ficedula_albicollis
ENSCANG00000035636	PTCD2	99	77.807	ENSFDAG00000018461	PTCD2	100	77.807	Fukomys_damarensis
ENSCANG00000035636	PTCD2	90	51.282	ENSGMOG00000003637	ptcd2	91	51.282	Gadus_morhua
ENSCANG00000035636	PTCD2	90	51.429	ENSGALG00000038260	PTCD2	100	49.479	Gallus_gallus
ENSCANG00000035636	PTCD2	98	57.963	ENSGAGG00000021952	PTCD2	98	57.963	Gopherus_agassizii
ENSCANG00000035636	PTCD2	100	90.464	ENSGGOG00000010695	PTCD2	100	90.464	Gorilla_gorilla
ENSCANG00000035636	PTCD2	96	44.533	ENSHBUG00000009191	ptcd2	96	44.533	Haplochromis_burtoni
ENSCANG00000035636	PTCD2	99	75.196	ENSHGLG00000001234	PTCD2	100	75.196	Heterocephalus_glaber_female
ENSCANG00000035636	PTCD2	99	75.196	ENSHGLG00100015419	PTCD2	100	75.196	Heterocephalus_glaber_male
ENSCANG00000035636	PTCD2	97	45.889	ENSHCOG00000001703	ptcd2	95	45.889	Hippocampus_comes
ENSCANG00000035636	PTCD2	84	45.370	ENSIPUG00000006080	ptcd2	90	45.376	Ictalurus_punctatus
ENSCANG00000035636	PTCD2	98	79.581	ENSSTOG00000006596	PTCD2	99	79.581	Ictidomys_tridecemlineatus
ENSCANG00000035636	PTCD2	99	78.068	ENSJJAG00000024388	Ptcd2	100	78.068	Jaculus_jaculus
ENSCANG00000035636	PTCD2	94	43.251	ENSKMAG00000009329	ptcd2	94	43.251	Kryptolebias_marmoratus
ENSCANG00000035636	PTCD2	99	45.337	ENSLBEG00000024871	ptcd2	98	45.337	Labrus_bergylta
ENSCANG00000035636	PTCD2	94	55.220	ENSLOCG00000011122	ptcd2	94	55.220	Lepisosteus_oculatus
ENSCANG00000035636	PTCD2	80	77.492	ENSLAFG00000004115	PTCD2	100	77.492	Loxodonta_africana
ENSCANG00000035636	PTCD2	100	95.619	ENSMFAG00000031516	PTCD2	100	95.619	Macaca_fascicularis
ENSCANG00000035636	PTCD2	99	95.561	ENSMNEG00000007537	PTCD2	100	95.561	Macaca_nemestrina
ENSCANG00000035636	PTCD2	100	94.845	ENSMLEG00000031093	PTCD2	100	94.845	Mandrillus_leucophaeus
ENSCANG00000035636	PTCD2	96	48.267	ENSMAMG00000018529	ptcd2	97	48.267	Mastacembelus_armatus
ENSCANG00000035636	PTCD2	96	44.533	ENSMZEG00005003625	ptcd2	96	44.533	Maylandia_zebra
ENSCANG00000035636	PTCD2	90	52.011	ENSMGAG00000005033	PTCD2	100	52.011	Meleagris_gallopavo
ENSCANG00000035636	PTCD2	99	56.919	ENSMAUG00000020253	Ptcd2	100	56.919	Mesocricetus_auratus
ENSCANG00000035636	PTCD2	99	79.587	ENSMICG00000004535	PTCD2	99	79.587	Microcebus_murinus
ENSCANG00000035636	PTCD2	99	72.324	ENSMOCG00000019985	Ptcd2	100	72.324	Microtus_ochrogaster
ENSCANG00000035636	PTCD2	99	58.333	ENSMODG00000001695	PTCD2	100	58.333	Monodelphis_domestica
ENSCANG00000035636	PTCD2	90	50.287	ENSMALG00000022372	ptcd2	91	50.287	Monopterus_albus
ENSCANG00000035636	PTCD2	99	71.802	MGP_CAROLIEiJ_G0018829	Ptcd2	100	71.802	Mus_caroli
ENSCANG00000035636	PTCD2	99	71.018	ENSMUSG00000021650	Ptcd2	100	71.018	Mus_musculus
ENSCANG00000035636	PTCD2	99	73.629	MGP_PahariEiJ_G0015904	Ptcd2	100	73.629	Mus_pahari
ENSCANG00000035636	PTCD2	99	71.540	MGP_SPRETEiJ_G0019711	Ptcd2	100	71.540	Mus_spretus
ENSCANG00000035636	PTCD2	99	79.112	ENSMPUG00000014401	PTCD2	100	79.112	Mustela_putorius_furo
ENSCANG00000035636	PTCD2	99	77.979	ENSMLUG00000007374	PTCD2	99	77.979	Myotis_lucifugus
ENSCANG00000035636	PTCD2	99	73.107	ENSNGAG00000005027	Ptcd2	100	73.107	Nannospalax_galili
ENSCANG00000035636	PTCD2	96	44.533	ENSNBRG00000008174	ptcd2	97	44.533	Neolamprologus_brichardi
ENSCANG00000035636	PTCD2	85	44.242	ENSNBRG00000000092	-	100	44.242	Neolamprologus_brichardi
ENSCANG00000035636	PTCD2	100	90.464	ENSNLEG00000004516	PTCD2	100	90.464	Nomascus_leucogenys
ENSCANG00000035636	PTCD2	99	47.287	ENSMEUG00000014012	-	99	47.287	Notamacropus_eugenii
ENSCANG00000035636	PTCD2	99	73.127	ENSOPRG00000007290	PTCD2	99	73.127	Ochotona_princeps
ENSCANG00000035636	PTCD2	99	77.546	ENSODEG00000016417	PTCD2	100	77.546	Octodon_degus
ENSCANG00000035636	PTCD2	81	46.203	ENSONIG00000011269	ptcd2	92	46.203	Oreochromis_niloticus
ENSCANG00000035636	PTCD2	94	80.220	ENSOCUG00000007970	PTCD2	100	78.590	Oryctolagus_cuniculus
ENSCANG00000035636	PTCD2	96	46.133	ENSORLG00000003851	ptcd2	95	46.133	Oryzias_latipes
ENSCANG00000035636	PTCD2	96	45.333	ENSORLG00020009823	ptcd2	97	45.333	Oryzias_latipes_hni
ENSCANG00000035636	PTCD2	89	46.686	ENSORLG00015016777	ptcd2	99	47.110	Oryzias_latipes_hsok
ENSCANG00000035636	PTCD2	93	45.304	ENSOMEG00000012396	ptcd2	87	45.304	Oryzias_melastigma
ENSCANG00000035636	PTCD2	99	73.902	ENSOGAG00000008390	PTCD2	99	73.902	Otolemur_garnettii
ENSCANG00000035636	PTCD2	99	80.103	ENSOARG00000005087	PTCD2	99	80.103	Ovis_aries
ENSCANG00000035636	PTCD2	100	90.206	ENSPPAG00000028480	PTCD2	100	90.206	Pan_paniscus
ENSCANG00000035636	PTCD2	100	89.948	ENSPTRG00000016968	PTCD2	100	89.948	Pan_troglodytes
ENSCANG00000035636	PTCD2	89	95.942	ENSPANG00000006611	PTCD2	89	95.942	Papio_anubis
ENSCANG00000035636	PTCD2	90	49.148	ENSPKIG00000019896	ptcd2	92	49.148	Paramormyrops_kingsleyae
ENSCANG00000035636	PTCD2	80	62.460	ENSPSIG00000014559	PTCD2	96	62.460	Pelodiscus_sinensis
ENSCANG00000035636	PTCD2	99	72.208	ENSPEMG00000000884	Ptcd2	100	72.208	Peromyscus_maniculatus_bairdii
ENSCANG00000035636	PTCD2	99	59.635	ENSPCIG00000029047	PTCD2	100	59.635	Phascolarctos_cinereus
ENSCANG00000035636	PTCD2	90	45.402	ENSPLAG00000010456	ptcd2	91	45.402	Poecilia_latipinna
ENSCANG00000035636	PTCD2	96	44.533	ENSPREG00000021797	ptcd2	95	44.533	Poecilia_reticulata
ENSCANG00000035636	PTCD2	99	78.295	ENSPPYG00000015543	PTCD2	99	78.295	Pongo_abelii
ENSCANG00000035636	PTCD2	80	65.385	ENSPCAG00000006806	PTCD2	99	65.385	Procavia_capensis
ENSCANG00000035636	PTCD2	99	76.166	ENSPVAG00000010935	PTCD2	99	76.166	Pteropus_vampyrus
ENSCANG00000035636	PTCD2	96	44.533	ENSPNYG00000003122	ptcd2	96	44.533	Pundamilia_nyererei
ENSCANG00000035636	PTCD2	97	48.677	ENSPNAG00000021490	ptcd2	98	48.942	Pygocentrus_nattereri
ENSCANG00000035636	PTCD2	99	71.279	ENSRNOG00000028403	Ptcd2	100	71.279	Rattus_norvegicus
ENSCANG00000035636	PTCD2	100	91.495	ENSRBIG00000032929	PTCD2	100	91.495	Rhinopithecus_bieti
ENSCANG00000035636	PTCD2	99	96.867	ENSRROG00000000080	PTCD2	100	96.867	Rhinopithecus_roxellana
ENSCANG00000035636	PTCD2	99	84.856	ENSSBOG00000018911	PTCD2	100	84.856	Saimiri_boliviensis_boliviensis
ENSCANG00000035636	PTCD2	99	59.375	ENSSHAG00000003833	PTCD2	99	59.375	Sarcophilus_harrisii
ENSCANG00000035636	PTCD2	93	46.832	ENSSFOG00015015415	ptcd2	93	46.832	Scleropages_formosus
ENSCANG00000035636	PTCD2	89	45.533	ENSSMAG00000010350	ptcd2	90	45.533	Scophthalmus_maximus
ENSCANG00000035636	PTCD2	94	48.219	ENSSDUG00000008142	ptcd2	90	48.219	Seriola_dumerili
ENSCANG00000035636	PTCD2	94	48.493	ENSSLDG00000015284	ptcd2	95	48.493	Seriola_lalandi_dorsalis
ENSCANG00000035636	PTCD2	80	68.932	ENSSARG00000004983	PTCD2	99	68.932	Sorex_araneus
ENSCANG00000035636	PTCD2	99	51.948	ENSSPUG00000000176	PTCD2	96	51.948	Sphenodon_punctatus
ENSCANG00000035636	PTCD2	96	45.067	ENSSPAG00000008591	ptcd2	96	45.067	Stegastes_partitus
ENSCANG00000035636	PTCD2	99	80.519	ENSSSCG00000016975	PTCD2	90	80.519	Sus_scrofa
ENSCANG00000035636	PTCD2	89	53.043	ENSTGUG00000005705	PTCD2	99	53.043	Taeniopygia_guttata
ENSCANG00000035636	PTCD2	99	75.907	ENSTBEG00000016559	PTCD2	99	75.907	Tupaia_belangeri
ENSCANG00000035636	PTCD2	99	80.103	ENSTTRG00000011851	PTCD2	99	80.103	Tursiops_truncatus
ENSCANG00000035636	PTCD2	100	76.289	ENSUAMG00000007583	PTCD2	91	76.289	Ursus_americanus
ENSCANG00000035636	PTCD2	99	77.023	ENSUMAG00000007666	PTCD2	100	77.023	Ursus_maritimus
ENSCANG00000035636	PTCD2	99	79.070	ENSVPAG00000009597	PTCD2	99	79.070	Vicugna_pacos
ENSCANG00000035636	PTCD2	99	76.240	ENSVVUG00000007299	-	100	76.240	Vulpes_vulpes
ENSCANG00000035636	PTCD2	90	53.846	ENSXETG00000031652	PTCD2	92	53.846	Xenopus_tropicalis
ENSCANG00000035636	PTCD2	90	44.828	ENSXMAG00000005940	ptcd2	82	44.828	Xiphophorus_maculatus