EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCANG00000035916 (Gene tree)
Gene ID: 105514139
Gene Symbol: RAB1A
Alias: -
Full Name: RAB1A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Plus strand
Length: 66122 bases
Position: chrKN980938.1:8881718-8947839
Accession: 105514139
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000025375	MMR_HSR1	PF01926.23	4.2e-05	1	1
ENSCANP00000025421	MMR_HSR1	PF01926.23	4.3e-05	1	1
ENSCANP00000025248	MMR_HSR1	PF01926.23	4.5e-05	1	1
ENSCANP00000025417	MMR_HSR1	PF01926.23	5.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000048356	RAB1A-203	522	-	ENSCANP00000025355	173 (aa)	-	A0A2K5J966
ENSCANT00000048252	RAB1A-202	2408	XM_011945299	ENSCANP00000025252	129 (aa)	XP_011800689	A0A2K5J8Z3
ENSCANT00000048377	RAB1A-204	603	-	ENSCANP00000025375	200 (aa)	-	A0A2K5J991
ENSCANT00000048249	RAB1A-201	2636	XM_011945295	ENSCANP00000025248	205 (aa)	XP_011800685	A0A2K5J8K1
ENSCANT00000048380	RAB1A-205	471	-	ENSCANP00000025378	156 (aa)	-	A0A2K5J8Z1
ENSCANT00000048424	RAB1A-208	609	-	ENSCANP00000025421	202 (aa)	-	A0A2K5J9E9
ENSCANT00000048419	RAB1A-206	645	-	ENSCANP00000025417	214 (aa)	-	A0A2K5J9G8
ENSCANT00000048420	RAB1A-207	453	-	ENSCANP00000025418	150 (aa)	-	A0A2K5J935

Gene Model

Click here to download ENSCANG00000035916's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000035916's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCANG00000035916	RAB1A	81	31.677	ENSCANG00000004264	-	73	31.677
ENSCANG00000035916	RAB1A	99	45.854	ENSCANG00000034570	-	99	48.780
ENSCANG00000035916	RAB1A	60	30.769	ENSCANG00000001658	ARL4A	65	30.769
ENSCANG00000035916	RAB1A	82	47.024	ENSCANG00000041717	RAB33A	72	46.471
ENSCANG00000035916	RAB1A	80	45.912	ENSCANG00000040397	RAB25	72	45.912
ENSCANG00000035916	RAB1A	80	37.423	ENSCANG00000041683	RAB7A	79	37.423
ENSCANG00000035916	RAB1A	92	47.541	ENSCANG00000029206	RAB2B	89	47.568
ENSCANG00000035916	RAB1A	78	38.365	ENSCANG00000012854	RAB9B	83	36.747
ENSCANG00000035916	RAB1A	77	35.294	ENSCANG00000030879	-	65	35.294
ENSCANG00000035916	RAB1A	85	48.555	ENSCANG00000031453	RAB12	88	45.078
ENSCANG00000035916	RAB1A	59	31.967	ENSCANG00000035065	ARL4C	59	31.967
ENSCANG00000035916	RAB1A	70	30.137	ENSCANG00000035715	-	72	30.137
ENSCANG00000035916	RAB1A	91	45.055	ENSCANG00000035397	RAB18	97	43.069
ENSCANG00000035916	RAB1A	85	32.544	ENSCANG00000031065	RAB23	73	31.792
ENSCANG00000035916	RAB1A	96	49.479	ENSCANG00000036573	-	97	49.239
ENSCANG00000035916	RAB1A	78	38.994	ENSCANG00000017244	RAB9A	79	38.994
ENSCANG00000035916	RAB1A	86	34.463	ENSCANG00000017827	HRAS	93	34.463
ENSCANG00000035916	RAB1A	82	37.805	ENSCANG00000021664	KRAS	95	35.912
ENSCANG00000035916	RAB1A	99	91.089	ENSCANG00000042299	RAB1B	100	91.089
ENSCANG00000035916	RAB1A	100	44.651	ENSCANG00000040517	RAB11B	99	44.651
ENSCANG00000035916	RAB1A	70	30.137	ENSCANG00000030439	-	72	30.137
ENSCANG00000035916	RAB1A	80	36.196	ENSCANG00000030432	RAB36	53	36.196
ENSCANG00000035916	RAB1A	80	50.625	ENSCANG00000009508	RAB15	90	57.009
ENSCANG00000035916	RAB1A	63	34.091	ENSCANG00000014873	ARL14	65	34.091
ENSCANG00000035916	RAB1A	59	33.607	ENSCANG00000043669	ARL2	62	33.607
ENSCANG00000035916	RAB1A	60	32.231	ENSCANG00000040054	RRAS2	69	32.231
ENSCANG00000035916	RAB1A	64	32.117	ENSCANG00000032641	ARL8B	71	32.117
ENSCANG00000035916	RAB1A	70	30.137	ENSCANG00000031504	-	72	30.137
ENSCANG00000035916	RAB1A	82	49.390	ENSCANG00000022240	RAB30	82	49.398
ENSCANG00000035916	RAB1A	59	33.333	ENSCANG00000022595	ARL4D	64	33.077
ENSCANG00000035916	RAB1A	90	33.514	ENSCANG00000040826	RERG	90	33.514
ENSCANG00000035916	RAB1A	97	42.784	ENSCANG00000043514	RAB5A	90	42.784
ENSCANG00000035916	RAB1A	99	43.564	ENSCANG00000039448	RAB14	93	43.564
ENSCANG00000035916	RAB1A	97	37.879	ENSCANG00000029094	RAB6A	94	37.879
ENSCANG00000035916	RAB1A	97	38.071	ENSCANG00000032052	RAB22A	97	38.071
ENSCANG00000035916	RAB1A	97	35.897	ENSCANG00000029838	RAB6B	94	35.897
ENSCANG00000035916	RAB1A	79	38.509	ENSCANG00000033566	RAB34	62	38.509
ENSCANG00000035916	RAB1A	69	30.282	ENSCANG00000042758	ARL3	72	30.282
ENSCANG00000035916	RAB1A	86	42.697	ENSCANG00000034492	RAB39B	84	42.697
ENSCANG00000035916	RAB1A	84	43.103	ENSCANG00000034858	RAB33B	76	43.103
ENSCANG00000035916	RAB1A	85	35.057	ENSCANG00000031708	MRAS	83	35.057

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000035916	RAB1A	100	97.561	ENSG00000138069	RAB1A	100	100.000	Homo_sapiens
ENSCANG00000035916	RAB1A	99	93.069	ENSAPOG00000008143	-	100	93.069	Acanthochromis_polyacanthus
ENSCANG00000035916	RAB1A	100	97.561	ENSAMEG00000001127	RAB1A	100	97.561	Ailuropoda_melanoleuca
ENSCANG00000035916	RAB1A	99	93.069	ENSAOCG00000020606	-	100	93.069	Amphiprion_ocellaris
ENSCANG00000035916	RAB1A	99	93.069	ENSAPEG00000022488	-	100	93.069	Amphiprion_percula
ENSCANG00000035916	RAB1A	100	97.561	ENSANAG00000020929	RAB1A	100	97.561	Aotus_nancymaae
ENSCANG00000035916	RAB1A	99	93.564	ENSACLG00000003326	-	100	93.564	Astatotilapia_calliptera
ENSCANG00000035916	RAB1A	99	92.079	ENSAMXG00000034850	-	100	92.079	Astyanax_mexicanus
ENSCANG00000035916	RAB1A	100	97.561	ENSBTAG00000016720	RAB1A	100	97.561	Bos_taurus
ENSCANG00000035916	RAB1A	100	97.561	ENSCJAG00000046275	RAB1A	100	97.561	Callithrix_jacchus
ENSCANG00000035916	RAB1A	100	97.561	ENSCAFG00000003187	RAB1A	100	97.561	Canis_familiaris
ENSCANG00000035916	RAB1A	100	97.561	ENSCAFG00020026971	RAB1A	100	97.561	Canis_lupus_dingo
ENSCANG00000035916	RAB1A	99	97.462	ENSCHIG00000014060	RAB1A	99	97.073	Capra_hircus
ENSCANG00000035916	RAB1A	99	97.462	ENSTSYG00000005996	RAB1A	100	97.462	Carlito_syrichta
ENSCANG00000035916	RAB1A	100	97.561	ENSCPOG00000015437	RAB1A	100	97.561	Cavia_porcellus
ENSCANG00000035916	RAB1A	100	97.561	ENSCCAG00000021869	RAB1A	100	97.561	Cebus_capucinus
ENSCANG00000035916	RAB1A	100	97.664	ENSCATG00000030853	RAB1A	100	97.561	Cercocebus_atys
ENSCANG00000035916	RAB1A	100	97.561	ENSCLAG00000014766	RAB1A	100	97.561	Chinchilla_lanigera
ENSCANG00000035916	RAB1A	100	97.073	ENSCPBG00000013243	RAB1A	100	97.073	Chrysemys_picta_bellii
ENSCANG00000035916	RAB1A	100	97.561	ENSCGRG00001012691	-	100	97.561	Cricetulus_griseus_chok1gshd
ENSCANG00000035916	RAB1A	100	97.561	ENSCGRG00000008456	-	100	97.561	Cricetulus_griseus_crigri
ENSCANG00000035916	RAB1A	100	97.561	ENSDNOG00000018236	RAB1A	100	97.561	Dasypus_novemcinctus
ENSCANG00000035916	RAB1A	100	97.561	ENSDORG00000028628	-	100	97.561	Dipodomys_ordii
ENSCANG00000035916	RAB1A	100	82.524	FBgn0285937	Rab1	100	82.524	Drosophila_melanogaster
ENSCANG00000035916	RAB1A	99	97.525	ENSETEG00000002205	RAB1A	100	97.525	Echinops_telfairi
ENSCANG00000035916	RAB1A	100	97.561	ENSEASG00005007298	RAB1A	100	97.561	Equus_asinus_asinus
ENSCANG00000035916	RAB1A	100	97.561	ENSECAG00000009926	RAB1A	100	97.561	Equus_caballus
ENSCANG00000035916	RAB1A	99	97.525	ENSEEUG00000011721	RAB1A	100	97.525	Erinaceus_europaeus
ENSCANG00000035916	RAB1A	99	93.137	ENSELUG00000012166	RAB1A	96	93.137	Esox_lucius
ENSCANG00000035916	RAB1A	100	97.561	ENSFCAG00000002536	RAB1A	100	97.561	Felis_catus
ENSCANG00000035916	RAB1A	99	96.954	ENSFALG00000013624	RAB1A	99	95.074	Ficedula_albicollis
ENSCANG00000035916	RAB1A	100	97.561	ENSFDAG00000019505	-	100	97.561	Fukomys_damarensis
ENSCANG00000035916	RAB1A	99	92.079	ENSFHEG00000014414	-	100	92.079	Fundulus_heteroclitus
ENSCANG00000035916	RAB1A	100	97.073	ENSGALG00000031582	RAB1A	100	97.073	Gallus_gallus
ENSCANG00000035916	RAB1A	99	92.574	ENSGAFG00000000918	-	100	92.574	Gambusia_affinis
ENSCANG00000035916	RAB1A	100	97.073	ENSGAGG00000006802	RAB1A	100	97.073	Gopherus_agassizii
ENSCANG00000035916	RAB1A	100	97.561	ENSGGOG00000026603	RAB1A	100	97.561	Gorilla_gorilla
ENSCANG00000035916	RAB1A	100	97.561	ENSHGLG00000013585	RAB1A	100	97.561	Heterocephalus_glaber_female
ENSCANG00000035916	RAB1A	99	97.462	ENSHGLG00100007994	RAB1A	100	95.588	Heterocephalus_glaber_male
ENSCANG00000035916	RAB1A	100	97.561	ENSSTOG00000020693	-	100	97.561	Ictidomys_tridecemlineatus
ENSCANG00000035916	RAB1A	99	97.462	ENSJJAG00000014396	Rab1a	100	97.462	Jaculus_jaculus
ENSCANG00000035916	RAB1A	99	92.462	ENSKMAG00000014038	-	94	92.462	Kryptolebias_marmoratus
ENSCANG00000035916	RAB1A	99	92.574	ENSLBEG00000028426	RAB1A	100	92.574	Labrus_bergylta
ENSCANG00000035916	RAB1A	100	96.098	ENSLACG00000012869	RAB1A	100	96.098	Latimeria_chalumnae
ENSCANG00000035916	RAB1A	100	97.561	ENSLAFG00000016666	RAB1A	100	97.561	Loxodonta_africana
ENSCANG00000035916	RAB1A	100	97.664	ENSMFAG00000046246	RAB1A	100	97.561	Macaca_fascicularis
ENSCANG00000035916	RAB1A	99	97.462	ENSMMUG00000021721	RAB1A	99	95.794	Macaca_mulatta
ENSCANG00000035916	RAB1A	95	96.907	ENSMNEG00000028414	-	97	96.907	Macaca_nemestrina
ENSCANG00000035916	RAB1A	100	97.561	ENSMLEG00000042535	RAB1A	100	97.561	Mandrillus_leucophaeus
ENSCANG00000035916	RAB1A	99	93.564	ENSMZEG00005013959	-	100	93.564	Maylandia_zebra
ENSCANG00000035916	RAB1A	99	96.954	ENSMGAG00000004611	RAB1A	100	96.535	Meleagris_gallopavo
ENSCANG00000035916	RAB1A	100	97.073	ENSMAUG00000012156	Rab1a	100	97.073	Mesocricetus_auratus
ENSCANG00000035916	RAB1A	100	97.561	ENSMICG00000012587	RAB1A	100	97.561	Microcebus_murinus
ENSCANG00000035916	RAB1A	100	97.073	ENSMOCG00000017022	Rab1a	100	97.073	Microtus_ochrogaster
ENSCANG00000035916	RAB1A	99	91.584	ENSMMOG00000018709	RAB1A	100	91.584	Mola_mola
ENSCANG00000035916	RAB1A	100	97.073	ENSMODG00000003340	RAB1A	100	97.073	Monodelphis_domestica
ENSCANG00000035916	RAB1A	100	97.561	MGP_CAROLIEiJ_G0016115	Rab1a	100	97.561	Mus_caroli
ENSCANG00000035916	RAB1A	100	97.561	ENSMUSG00000020149	Rab1a	100	97.561	Mus_musculus
ENSCANG00000035916	RAB1A	100	97.561	MGP_PahariEiJ_G0016776	Rab1a	100	97.561	Mus_pahari
ENSCANG00000035916	RAB1A	100	97.561	MGP_SPRETEiJ_G0016958	Rab1a	100	97.561	Mus_spretus
ENSCANG00000035916	RAB1A	100	97.561	ENSMPUG00000006139	RAB1A	82	97.561	Mustela_putorius_furo
ENSCANG00000035916	RAB1A	100	97.561	ENSMLUG00000009489	RAB1A	100	97.561	Myotis_lucifugus
ENSCANG00000035916	RAB1A	100	97.561	ENSNGAG00000005838	Rab1a	100	97.561	Nannospalax_galili
ENSCANG00000035916	RAB1A	99	93.564	ENSNBRG00000020492	-	100	93.564	Neolamprologus_brichardi
ENSCANG00000035916	RAB1A	99	97.462	ENSOPRG00000006595	RAB1A	100	97.462	Ochotona_princeps
ENSCANG00000035916	RAB1A	96	97.396	ENSODEG00000011248	-	96	97.396	Octodon_degus
ENSCANG00000035916	RAB1A	99	91.371	ENSONIG00000006819	-	100	91.176	Oreochromis_niloticus
ENSCANG00000035916	RAB1A	100	97.073	ENSOANG00000012438	RAB1A	100	97.073	Ornithorhynchus_anatinus
ENSCANG00000035916	RAB1A	100	97.561	ENSOCUG00000017003	RAB1A	100	97.561	Oryctolagus_cuniculus
ENSCANG00000035916	RAB1A	100	97.561	ENSOGAG00000026181	RAB1A	100	97.561	Otolemur_garnettii
ENSCANG00000035916	RAB1A	99	97.462	ENSOARG00000019997	RAB1A	100	97.044	Ovis_aries
ENSCANG00000035916	RAB1A	100	97.525	ENSPPAG00000030253	RAB1A	100	97.525	Pan_paniscus
ENSCANG00000035916	RAB1A	100	97.561	ENSPPRG00000025077	RAB1A	100	97.561	Panthera_pardus
ENSCANG00000035916	RAB1A	99	97.462	ENSPTIG00000013471	RAB1A	100	97.059	Panthera_tigris_altaica
ENSCANG00000035916	RAB1A	100	97.561	ENSPTRG00000011989	RAB1A	100	97.561	Pan_troglodytes
ENSCANG00000035916	RAB1A	100	97.664	ENSPANG00000010485	RAB1A	100	97.561	Papio_anubis
ENSCANG00000035916	RAB1A	99	96.954	ENSPSIG00000008028	RAB1A	97	96.970	Pelodiscus_sinensis
ENSCANG00000035916	RAB1A	99	93.401	ENSPMGG00000021015	-	99	93.137	Periophthalmus_magnuspinnatus
ENSCANG00000035916	RAB1A	100	97.561	ENSPEMG00000009340	Rab1a	100	97.561	Peromyscus_maniculatus_bairdii
ENSCANG00000035916	RAB1A	100	97.073	ENSPCIG00000023212	RAB1A	100	97.073	Phascolarctos_cinereus
ENSCANG00000035916	RAB1A	99	91.878	ENSPFOG00000000498	-	99	91.176	Poecilia_formosa
ENSCANG00000035916	RAB1A	99	92.079	ENSPLAG00000015592	-	100	92.079	Poecilia_latipinna
ENSCANG00000035916	RAB1A	99	92.079	ENSPMEG00000005288	-	100	92.079	Poecilia_mexicana
ENSCANG00000035916	RAB1A	100	97.561	ENSPPYG00000012360	RAB1A	100	97.561	Pongo_abelii
ENSCANG00000035916	RAB1A	100	97.561	ENSPCOG00000017244	RAB1A	100	97.561	Propithecus_coquereli
ENSCANG00000035916	RAB1A	99	93.564	ENSPNYG00000015841	-	100	93.564	Pundamilia_nyererei
ENSCANG00000035916	RAB1A	100	97.561	ENSRNOG00000004992	Rab1a	100	97.561	Rattus_norvegicus
ENSCANG00000035916	RAB1A	100	97.561	ENSSBOG00000023732	RAB1A	100	97.561	Saimiri_boliviensis_boliviensis
ENSCANG00000035916	RAB1A	99	96.954	ENSSHAG00000003597	RAB1A	98	95.522	Sarcophilus_harrisii
ENSCANG00000035916	RAB1A	99	93.069	ENSSMAG00000021049	-	100	93.069	Scophthalmus_maximus
ENSCANG00000035916	RAB1A	99	93.564	ENSSDUG00000022535	RAB1A	100	93.564	Seriola_dumerili
ENSCANG00000035916	RAB1A	100	97.073	ENSSPUG00000012822	RAB1A	100	97.073	Sphenodon_punctatus
ENSCANG00000035916	RAB1A	99	93.069	ENSSPAG00000012564	-	100	93.069	Stegastes_partitus
ENSCANG00000035916	RAB1A	100	97.561	ENSSSCG00000008359	RAB1A	100	97.561	Sus_scrofa
ENSCANG00000035916	RAB1A	100	96.000	ENSTGUG00000002328	RAB1A	100	94.634	Taeniopygia_guttata
ENSCANG00000035916	RAB1A	99	92.574	ENSTRUG00000024994	RAB1A	100	92.574	Takifugu_rubripes
ENSCANG00000035916	RAB1A	99	97.462	ENSUMAG00000021038	RAB1A	99	97.475	Ursus_maritimus
ENSCANG00000035916	RAB1A	99	96.970	ENSVPAG00000005640	RAB1A	99	96.970	Vicugna_pacos
ENSCANG00000035916	RAB1A	100	97.561	ENSVVUG00000027588	RAB1A	100	97.561	Vulpes_vulpes
ENSCANG00000035916	RAB1A	99	92.574	ENSXMAG00000015776	-	100	92.574	Xiphophorus_maculatus