EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCANG00000036573 (Gene tree)
Gene ID: 105501994
Gene Symbol: -
Alias: -
Full Name: RAB13%2C member RAS oncogene family
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Minus strand
Length: 4535 bases
Position: chrKN985733.1:770551-775085
Accession: 105501994
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000026304	MMR_HSR1	PF01926.23	0.00019	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000049334	-	375	-	ENSCANP00000026324	124 (aa)	-	A0A2K5JBQ9
ENSCANT00000049314	-	1188	XM_011928180	ENSCANP00000026304	203 (aa)	XP_011783570	A0A2K5JBN4
ENSCANT00000049323	-	1319	XM_011928181	ENSCANP00000026314	122 (aa)	XP_011783571	A0A2K5JBP6

Gene Model

Click here to download ENSCANG00000036573's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000036573's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCANG00000036573	-	95	37.379	ENSCANG00000033566	RAB34	80	37.379
ENSCANG00000036573	-	76	30.189	ENSCANG00000029144	-	90	30.189
ENSCANG00000036573	-	83	35.632	ENSCANG00000040826	RERG	84	35.632
ENSCANG00000036573	-	81	47.273	ENSCANG00000034570	-	88	48.529
ENSCANG00000036573	-	91	36.757	ENSCANG00000021664	KRAS	98	37.436
ENSCANG00000036573	-	78	42.405	ENSCANG00000029838	RAB6B	76	42.405
ENSCANG00000036573	-	95	39.062	ENSCANG00000043514	RAB5A	89	39.062
ENSCANG00000036573	-	79	39.506	ENSCANG00000017827	HRAS	85	39.506
ENSCANG00000036573	-	87	42.781	ENSCANG00000041717	RAB33A	79	42.781
ENSCANG00000036573	-	80	40.476	ENSCANG00000012854	RAB9B	83	40.476
ENSCANG00000036573	-	84	51.744	ENSCANG00000031453	RAB12	78	51.744
ENSCANG00000036573	-	83	41.379	ENSCANG00000034858	RAB33B	76	41.379
ENSCANG00000036573	-	66	32.836	ENSCANG00000037234	ARF5	78	32.836
ENSCANG00000036573	-	80	38.323	ENSCANG00000041683	RAB7A	81	38.323
ENSCANG00000036573	-	83	48.214	ENSCANG00000029206	RAB2B	81	48.214
ENSCANG00000036573	-	84	53.529	ENSCANG00000009508	RAB15	94	57.143
ENSCANG00000036573	-	80	49.383	ENSCANG00000022240	RAB30	80	49.383
ENSCANG00000036573	-	81	38.182	ENSCANG00000031065	RAB23	69	38.182
ENSCANG00000036573	-	78	43.671	ENSCANG00000029094	RAB6A	76	43.671
ENSCANG00000036573	-	78	30.189	ENSCANG00000030879	-	67	30.189
ENSCANG00000036573	-	79	37.423	ENSCANG00000031708	MRAS	78	37.423
ENSCANG00000036573	-	91	42.424	ENSCANG00000040517	RAB11B	91	42.424
ENSCANG00000036573	-	80	33.333	ENSCANG00000004264	-	74	33.333
ENSCANG00000036573	-	91	36.702	ENSCANG00000032052	RAB22A	97	36.702
ENSCANG00000036573	-	86	44.318	ENSCANG00000035397	RAB18	85	44.318
ENSCANG00000036573	-	90	38.462	ENSCANG00000040397	RAB25	88	38.462
ENSCANG00000036573	-	79	33.333	ENSCANG00000040054	RRAS2	88	33.333
ENSCANG00000036573	-	86	46.629	ENSCANG00000034492	RAB39B	84	46.629
ENSCANG00000036573	-	58	32.231	ENSCANG00000014873	ARL14	60	32.231
ENSCANG00000036573	-	91	54.348	ENSCANG00000042299	RAB1B	92	54.348
ENSCANG00000036573	-	80	38.824	ENSCANG00000017244	RAB9A	83	38.824
ENSCANG00000036573	-	97	49.239	ENSCANG00000035916	RAB1A	96	49.479
ENSCANG00000036573	-	81	44.242	ENSCANG00000039448	RAB14	77	44.242
ENSCANG00000036573	-	78	39.506	ENSCANG00000030432	RAB36	53	39.506

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000036573	-	100	100.000	ENSG00000143545	RAB13	100	100.000	Homo_sapiens
ENSCANG00000036573	-	99	75.124	ENSACIG00000008584	rab13	97	75.124	Amphilophus_citrinellus
ENSCANG00000036573	-	100	98.522	ENSANAG00000030247	-	100	98.522	Aotus_nancymaae
ENSCANG00000036573	-	99	78.713	ENSAMXG00000030712	rab13	99	78.713	Astyanax_mexicanus
ENSCANG00000036573	-	100	98.030	ENSBTAG00000017604	RAB13	100	98.030	Bos_taurus
ENSCANG00000036573	-	80	47.239	WBGene00019317	K02E10.1	75	47.239	Caenorhabditis_elegans
ENSCANG00000036573	-	100	98.030	ENSCJAG00000009933	-	100	98.030	Callithrix_jacchus
ENSCANG00000036573	-	100	97.537	ENSCHIG00000022271	-	100	97.537	Capra_hircus
ENSCANG00000036573	-	99	91.089	ENSCPOG00000011491	-	99	91.089	Cavia_porcellus
ENSCANG00000036573	-	100	99.507	ENSCCAG00000028502	-	100	99.507	Cebus_capucinus
ENSCANG00000036573	-	100	100.000	ENSCATG00000041779	-	100	100.000	Cercocebus_atys
ENSCANG00000036573	-	100	91.133	ENSCLAG00000006603	-	100	91.133	Chinchilla_lanigera
ENSCANG00000036573	-	100	95.567	ENSCGRG00001021505	Rab13	100	95.567	Cricetulus_griseus_chok1gshd
ENSCANG00000036573	-	100	95.567	ENSCGRG00000012126	Rab13	100	95.567	Cricetulus_griseus_crigri
ENSCANG00000036573	-	99	75.980	ENSCSEG00000002358	rab13	99	75.980	Cynoglossus_semilaevis
ENSCANG00000036573	-	99	78.218	ENSDARG00000034771	rab13	99	78.218	Danio_rerio
ENSCANG00000036573	-	100	94.581	ENSDORG00000001591	Rab13	100	94.581	Dipodomys_ordii
ENSCANG00000036573	-	100	98.522	ENSEASG00005000683	-	100	98.522	Equus_asinus_asinus
ENSCANG00000036573	-	100	98.522	ENSECAG00000016551	RAB13	100	98.522	Equus_caballus
ENSCANG00000036573	-	99	90.099	ENSEEUG00000001233	-	99	90.099	Erinaceus_europaeus
ENSCANG00000036573	-	99	76.733	ENSELUG00000012801	rab13	99	76.733	Esox_lucius
ENSCANG00000036573	-	100	92.118	ENSFCAG00000045269	-	100	92.118	Felis_catus
ENSCANG00000036573	-	65	96.970	ENSFDAG00000014469	-	100	96.970	Fukomys_damarensis
ENSCANG00000036573	-	99	75.743	ENSFHEG00000021221	rab13	95	85.549	Fundulus_heteroclitus
ENSCANG00000036573	-	99	75.248	ENSGACG00000011925	rab13	99	75.248	Gasterosteus_aculeatus
ENSCANG00000036573	-	85	90.751	ENSGAGG00000000742	-	99	81.281	Gopherus_agassizii
ENSCANG00000036573	-	100	100.000	ENSGGOG00000023693	RAB13	100	100.000	Gorilla_gorilla
ENSCANG00000036573	-	100	90.148	ENSHGLG00000008749	RAB13	100	90.148	Heterocephalus_glaber_female
ENSCANG00000036573	-	100	90.148	ENSHGLG00100013608	RAB13	100	90.148	Heterocephalus_glaber_male
ENSCANG00000036573	-	99	73.762	ENSHCOG00000007440	rab13	95	86.127	Hippocampus_comes
ENSCANG00000036573	-	99	77.000	ENSIPUG00000003199	rab13	99	77.000	Ictalurus_punctatus
ENSCANG00000036573	-	100	97.044	ENSSTOG00000011222	-	100	97.044	Ictidomys_tridecemlineatus
ENSCANG00000036573	-	100	92.118	ENSJJAG00000010575	Rab13	100	92.118	Jaculus_jaculus
ENSCANG00000036573	-	99	75.500	ENSKMAG00000001908	rab13	99	75.500	Kryptolebias_marmoratus
ENSCANG00000036573	-	99	77.000	ENSLBEG00000026779	rab13	99	77.000	Labrus_bergylta
ENSCANG00000036573	-	85	77.907	ENSLACG00000008103	-	97	77.907	Latimeria_chalumnae
ENSCANG00000036573	-	100	100.000	ENSMFAG00000041018	RAB13	100	100.000	Macaca_fascicularis
ENSCANG00000036573	-	100	100.000	ENSMNEG00000028951	-	100	100.000	Macaca_nemestrina
ENSCANG00000036573	-	100	100.000	ENSMLEG00000042247	-	100	100.000	Mandrillus_leucophaeus
ENSCANG00000036573	-	99	75.248	ENSMAMG00000014602	rab13	99	75.248	Mastacembelus_armatus
ENSCANG00000036573	-	100	94.581	ENSMAUG00000015713	Rab13	100	94.581	Mesocricetus_auratus
ENSCANG00000036573	-	100	97.044	ENSMICG00000010340	-	100	97.044	Microcebus_murinus
ENSCANG00000036573	-	100	95.567	ENSMOCG00000021448	Rab13	100	95.567	Microtus_ochrogaster
ENSCANG00000036573	-	99	92.574	ENSMODG00000017295	-	84	92.574	Monodelphis_domestica
ENSCANG00000036573	-	100	92.611	MGP_CAROLIEiJ_G0025227	Rab13	100	92.611	Mus_caroli
ENSCANG00000036573	-	100	91.626	ENSMUSG00000027935	Rab13	100	91.626	Mus_musculus
ENSCANG00000036573	-	99	92.079	MGP_PahariEiJ_G0026671	Rab13	99	92.079	Mus_pahari
ENSCANG00000036573	-	100	95.567	ENSNGAG00000010309	Rab13	100	95.567	Nannospalax_galili
ENSCANG00000036573	-	99	75.248	ENSNBRG00000004124	rab13	99	75.248	Neolamprologus_brichardi
ENSCANG00000036573	-	100	100.000	ENSNLEG00000028944	-	100	100.000	Nomascus_leucogenys
ENSCANG00000036573	-	100	92.157	ENSMEUG00000009667	-	100	92.157	Notamacropus_eugenii
ENSCANG00000036573	-	100	89.655	ENSODEG00000010443	-	100	89.655	Octodon_degus
ENSCANG00000036573	-	63	97.638	ENSODEG00000012634	-	100	97.638	Octodon_degus
ENSCANG00000036573	-	99	75.743	ENSONIG00000006340	rab13	99	75.743	Oreochromis_niloticus
ENSCANG00000036573	-	88	96.067	ENSOCUG00000006286	-	100	96.067	Oryctolagus_cuniculus
ENSCANG00000036573	-	99	76.238	ENSOMEG00000008210	rab13	99	76.238	Oryzias_melastigma
ENSCANG00000036573	-	99	94.059	ENSOGAG00000016969	-	99	94.059	Otolemur_garnettii
ENSCANG00000036573	-	100	100.000	ENSPPAG00000028435	-	100	100.000	Pan_paniscus
ENSCANG00000036573	-	100	92.118	ENSPPRG00000008865	-	100	92.118	Panthera_pardus
ENSCANG00000036573	-	100	100.000	ENSPTRG00000001370	RAB13	100	100.000	Pan_troglodytes
ENSCANG00000036573	-	100	100.000	ENSPANG00000004479	-	100	100.000	Papio_anubis
ENSCANG00000036573	-	99	75.743	ENSPMGG00000007680	rab13	99	75.743	Periophthalmus_magnuspinnatus
ENSCANG00000036573	-	53	97.222	ENSPEMG00000017353	-	100	97.222	Peromyscus_maniculatus_bairdii
ENSCANG00000036573	-	100	92.647	ENSPCIG00000029350	-	100	92.647	Phascolarctos_cinereus
ENSCANG00000036573	-	95	74.112	ENSPLAG00000005832	RAB13	93	83.815	Poecilia_latipinna
ENSCANG00000036573	-	90	80.328	ENSPREG00000017567	rab13	99	74.257	Poecilia_reticulata
ENSCANG00000036573	-	100	100.000	ENSPPYG00000000790	-	100	100.000	Pongo_abelii
ENSCANG00000036573	-	100	98.030	ENSPCOG00000012189	-	100	98.030	Propithecus_coquereli
ENSCANG00000036573	-	100	95.074	ENSPVAG00000011095	-	100	95.074	Pteropus_vampyrus
ENSCANG00000036573	-	85	86.127	ENSPNAG00000004189	rab13	92	86.127	Pygocentrus_nattereri
ENSCANG00000036573	-	100	92.611	ENSRNOG00000016733	Rab13	100	92.611	Rattus_norvegicus
ENSCANG00000036573	-	100	99.507	ENSRBIG00000008552	-	100	99.507	Rhinopithecus_bieti
ENSCANG00000036573	-	100	99.507	ENSRROG00000036885	-	100	99.507	Rhinopithecus_roxellana
ENSCANG00000036573	-	100	99.015	ENSSBOG00000020342	-	100	99.015	Saimiri_boliviensis_boliviensis
ENSCANG00000036573	-	100	91.667	ENSSHAG00000011866	-	100	91.667	Sarcophilus_harrisii
ENSCANG00000036573	-	100	98.522	ENSSSCG00000006564	-	100	98.522	Sus_scrofa
ENSCANG00000036573	-	99	76.733	ENSTRUG00000024177	rab13	99	76.733	Takifugu_rubripes
ENSCANG00000036573	-	100	97.044	ENSTBEG00000012734	-	100	97.044	Tupaia_belangeri
ENSCANG00000036573	-	100	99.507	ENSTTRG00000011183	-	100	99.507	Tursiops_truncatus
ENSCANG00000036573	-	71	81.944	ENSXETG00000020729	rab13	99	78.882	Xenopus_tropicalis
ENSCANG00000036573	-	85	82.659	ENSXCOG00000019533	rab13	93	82.659	Xiphophorus_couchianus