EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCANG00000036756 (Gene tree)
Gene ID: 105518876
Gene Symbol: NCL
Alias: C23|Nsr1
Full Name: nucleolin
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Minus strand
Length: 18638 bases
Position: chrKN981935.1:11084312-11102949
Accession: 105518876
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000026666	RRM_1	PF00076.22	2.4e-48	1	3
ENSCANP00000026666	RRM_1	PF00076.22	2.4e-48	2	3
ENSCANP00000026666	RRM_1	PF00076.22	2.4e-48	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000049678	NCL-201	1257	XM_011952044	ENSCANP00000026666	418 (aa)	XP_011807434	A0A2K5JCW5

Gene Model

Click here to download ENSCANG00000036756's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000036756's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCANG00000036756	NCL	71	30.597	ENSCANG00000021524	PABPC1	60	30.597

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000036756	NCL	94	100.000	ENSG00000115053	NCL	100	86.486	Homo_sapiens
ENSCANG00000036756	NCL	88	76.302	ENSANAG00000024378	-	64	75.610	Aotus_nancymaae
ENSCANG00000036756	NCL	94	100.000	ENSANAG00000035814	-	58	100.000	Aotus_nancymaae
ENSCANG00000036756	NCL	71	84.583	ENSBTAG00000026909	-	56	84.937	Bos_taurus
ENSCANG00000036756	NCL	91	82.895	ENSBTAG00000050728	-	58	82.661	Bos_taurus
ENSCANG00000036756	NCL	92	76.515	ENSBTAG00000051320	-	56	82.629	Bos_taurus
ENSCANG00000036756	NCL	100	94.330	ENSCJAG00000013538	NCL	58	100.000	Callithrix_jacchus
ENSCANG00000036756	NCL	92	90.909	ENSCHIG00000021052	-	61	92.063	Capra_hircus
ENSCANG00000036756	NCL	88	92.708	ENSCHIG00000010894	-	58	91.753	Capra_hircus
ENSCANG00000036756	NCL	88	80.435	ENSCHIG00000012143	-	51	82.372	Capra_hircus
ENSCANG00000036756	NCL	94	100.000	ENSTSYG00000004355	-	57	100.000	Carlito_syrichta
ENSCANG00000036756	NCL	70	81.290	ENSTSYG00000036886	-	53	78.049	Carlito_syrichta
ENSCANG00000036756	NCL	94	100.000	ENSCCAG00000021040	-	76	100.000	Cebus_capucinus
ENSCANG00000036756	NCL	70	83.417	ENSCCAG00000000551	-	51	83.582	Cebus_capucinus
ENSCANG00000036756	NCL	94	100.000	ENSCATG00000037033	NCL	74	100.000	Cercocebus_atys
ENSCANG00000036756	NCL	89	94.072	ENSCSAG00000006660	NCL	84	94.072	Chlorocebus_sabaeus
ENSCANG00000036756	NCL	72	78.797	ENSCHOG00000012860	NCL	68	78.882	Choloepus_hoffmanni
ENSCANG00000036756	NCL	94	100.000	ENSDNOG00000010783	-	50	100.000	Dasypus_novemcinctus
ENSCANG00000036756	NCL	94	95.833	ENSDNOG00000046347	-	59	95.455	Dasypus_novemcinctus
ENSCANG00000036756	NCL	81	100.000	ENSDORG00000012513	-	50	100.000	Dipodomys_ordii
ENSCANG00000036756	NCL	82	62.179	ENSETEG00000008139	-	55	61.514	Echinops_telfairi
ENSCANG00000036756	NCL	73	86.335	ENSETEG00000014756	-	74	85.890	Echinops_telfairi
ENSCANG00000036756	NCL	89	59.278	ENSETEG00000008553	-	68	62.385	Echinops_telfairi
ENSCANG00000036756	NCL	88	92.969	ENSEASG00005008488	NCL	77	92.010	Equus_asinus_asinus
ENSCANG00000036756	NCL	89	92.526	ENSFCAG00000027622	NCL	54	92.526	Felis_catus
ENSCANG00000036756	NCL	94	100.000	ENSGGOG00000004300	NCL	71	91.935	Gorilla_gorilla
ENSCANG00000036756	NCL	88	78.385	ENSHGLG00100000745	-	51	79.268	Heterocephalus_glaber_male
ENSCANG00000036756	NCL	93	100.000	ENSHGLG00100014537	-	50	100.000	Heterocephalus_glaber_male
ENSCANG00000036756	NCL	99	83.333	ENSLAFG00000013061	NCL	52	100.000	Loxodonta_africana
ENSCANG00000036756	NCL	94	100.000	ENSMFAG00000040385	NCL	62	100.000	Macaca_fascicularis
ENSCANG00000036756	NCL	94	100.000	ENSMMUG00000018094	NCL	62	100.000	Macaca_mulatta
ENSCANG00000036756	NCL	94	100.000	ENSMNEG00000023839	NCL	62	100.000	Macaca_nemestrina
ENSCANG00000036756	NCL	94	100.000	ENSMLEG00000028935	NCL	74	100.000	Mandrillus_leucophaeus
ENSCANG00000036756	NCL	78	75.207	ENSMICG00000029975	-	56	73.333	Microcebus_murinus
ENSCANG00000036756	NCL	88	85.455	ENSMUSG00000026234	Ncl	63	83.077	Mus_musculus
ENSCANG00000036756	NCL	90	85.455	MGP_PahariEiJ_G0027599	Ncl	61	83.077	Mus_pahari
ENSCANG00000036756	NCL	74	86.769	ENSNGAG00000002454	-	62	86.769	Nannospalax_galili
ENSCANG00000036756	NCL	88	77.236	ENSNLEG00000014107	-	52	76.676	Nomascus_leucogenys
ENSCANG00000036756	NCL	94	91.667	ENSODEG00000003281	-	54	84.794	Octodon_degus
ENSCANG00000036756	NCL	94	95.833	ENSODEG00000002748	-	73	95.455	Octodon_degus
ENSCANG00000036756	NCL	96	91.667	ENSODEG00000002441	-	56	78.814	Octodon_degus
ENSCANG00000036756	NCL	93	95.455	ENSOCUG00000004312	NCL	59	90.464	Oryctolagus_cuniculus
ENSCANG00000036756	NCL	80	100.000	ENSOGAG00000027852	NCL	59	100.000	Otolemur_garnettii
ENSCANG00000036756	NCL	74	89.506	ENSOARG00000013710	-	75	89.024	Ovis_aries
ENSCANG00000036756	NCL	75	75.076	ENSOARG00000004072	-	52	75.000	Ovis_aries
ENSCANG00000036756	NCL	94	100.000	ENSPPAG00000011619	NCL	58	100.000	Pan_paniscus
ENSCANG00000036756	NCL	94	95.455	ENSPPRG00000012603	NCL	54	92.526	Panthera_pardus
ENSCANG00000036756	NCL	89	92.526	ENSPTIG00000010393	NCL	54	92.526	Panthera_tigris_altaica
ENSCANG00000036756	NCL	94	100.000	ENSPTRG00000013025	NCL	74	100.000	Pan_troglodytes
ENSCANG00000036756	NCL	94	100.000	ENSPANG00000010292	NCL	58	100.000	Papio_anubis
ENSCANG00000036756	NCL	94	100.000	ENSPPYG00000013265	NCL	58	100.000	Pongo_abelii
ENSCANG00000036756	NCL	78	95.455	ENSPCOG00000004160	-	62	95.455	Propithecus_coquereli
ENSCANG00000036756	NCL	94	100.000	ENSPVAG00000000297	NCL	58	100.000	Pteropus_vampyrus
ENSCANG00000036756	NCL	71	95.455	ENSRBIG00000035396	-	93	91.611	Rhinopithecus_bieti
ENSCANG00000036756	NCL	79	100.000	ENSRBIG00000037525	-	50	100.000	Rhinopithecus_bieti
ENSCANG00000036756	NCL	94	100.000	ENSRROG00000028756	-	58	100.000	Rhinopithecus_roxellana
ENSCANG00000036756	NCL	93	95.455	ENSSBOG00000027549	-	74	95.455	Saimiri_boliviensis_boliviensis
ENSCANG00000036756	NCL	94	100.000	ENSSBOG00000029193	-	58	100.000	Saimiri_boliviensis_boliviensis
ENSCANG00000036756	NCL	88	93.229	ENSUAMG00000005639	NCL	77	92.268	Ursus_americanus