EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCANG00000036801 (Gene tree)
Gene ID: 105521301
Gene Symbol: YBX3
Alias: CSDA|CSDA1|ZONAB|dbpA
Full Name: Y-box binding protein 3
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Plus strand
Length: 23891 bases
Position: chrKN979496.1:3767077-3790967
Accession: 105521301
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000026759	CSD	PF00313.22	4.1e-26	1	1
ENSCANP00000026757	CSD	PF00313.22	5.1e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000049770	YBX3-201	1549	XM_011955480	ENSCANP00000026757	315 (aa)	XP_011810870	A0A2K5JD58
ENSCANT00000049772	YBX3-202	741	-	ENSCANP00000026759	246 (aa)	-	A0A2K5JCZ3

Gene Model

Click here to download ENSCANG00000036801's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000036801's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCANG00000036801	YBX3	90	50.831	ENSCANG00000035622	-	98	55.208
ENSCANG00000036801	YBX3	92	49.660	ENSCANG00000027745	-	99	43.046
ENSCANG00000036801	YBX3	83	86.735	ENSCANG00000032054	-	95	50.327

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000036801	YBX3	100	98.413	ENSG00000060138	YBX3	91	97.619	Homo_sapiens
ENSCANG00000036801	YBX3	92	93.103	ENSAMEG00000009393	YBX3	83	92.177	Ailuropoda_melanoleuca
ENSCANG00000036801	YBX3	90	65.035	ENSAPLG00000003147	YBX3	70	100.000	Anas_platyrhynchos
ENSCANG00000036801	YBX3	91	70.996	ENSANAG00000033366	-	71	86.923	Aotus_nancymaae
ENSCANG00000036801	YBX3	100	98.095	ENSANAG00000024492	-	99	98.095	Aotus_nancymaae
ENSCANG00000036801	YBX3	100	88.254	ENSBTAG00000009663	YBX3	78	86.441	Bos_taurus
ENSCANG00000036801	YBX3	100	97.460	ENSCJAG00000021660	-	85	97.460	Callithrix_jacchus
ENSCANG00000036801	YBX3	100	71.545	ENSCJAG00000033824	-	73	93.243	Callithrix_jacchus
ENSCANG00000036801	YBX3	91	92.014	ENSCAFG00000013401	YBX3	100	91.743	Canis_familiaris
ENSCANG00000036801	YBX3	93	89.420	ENSCAFG00020006412	YBX3	78	88.814	Canis_lupus_dingo
ENSCANG00000036801	YBX3	100	88.254	ENSCHIG00000010863	YBX3	82	89.492	Capra_hircus
ENSCANG00000036801	YBX3	91	94.425	ENSTSYG00000004204	-	88	94.425	Carlito_syrichta
ENSCANG00000036801	YBX3	91	82.589	ENSTSYG00000035821	-	72	95.745	Carlito_syrichta
ENSCANG00000036801	YBX3	91	87.108	ENSCAPG00000015039	YBX3	93	87.108	Cavia_aperea
ENSCANG00000036801	YBX3	91	90.625	ENSCPOG00000011329	YBX3	86	88.055	Cavia_porcellus
ENSCANG00000036801	YBX3	100	97.561	ENSCCAG00000016469	YBX3	85	97.460	Cebus_capucinus
ENSCANG00000036801	YBX3	100	98.413	ENSCATG00000034411	YBX3	84	98.413	Cercocebus_atys
ENSCANG00000036801	YBX3	91	87.108	ENSCLAG00000016030	YBX3	94	87.108	Chinchilla_lanigera
ENSCANG00000036801	YBX3	100	99.048	ENSCSAG00000008744	YBX3	84	99.048	Chlorocebus_sabaeus
ENSCANG00000036801	YBX3	84	95.745	ENSCHOG00000011988	YBX3	56	95.745	Choloepus_hoffmanni
ENSCANG00000036801	YBX3	90	83.258	ENSCPBG00000014147	YBX3	81	79.181	Chrysemys_picta_bellii
ENSCANG00000036801	YBX3	75	54.011	ENSCING00000010654	yb1/2/3	73	50.000	Ciona_intestinalis
ENSCANG00000036801	YBX3	100	89.524	ENSCGRG00001016148	Ybx3	81	90.847	Cricetulus_griseus_chok1gshd
ENSCANG00000036801	YBX3	91	90.411	ENSCGRG00000004563	Ybx3	98	89.041	Cricetulus_griseus_crigri
ENSCANG00000036801	YBX3	90	90.877	ENSDORG00000009103	Ybx3	81	90.244	Dipodomys_ordii
ENSCANG00000036801	YBX3	90	84.912	ENSETEG00000002557	YBX3	99	84.155	Echinops_telfairi
ENSCANG00000036801	YBX3	94	84.746	ENSEASG00005014726	YBX3	79	84.746	Equus_asinus_asinus
ENSCANG00000036801	YBX3	94	89.831	ENSECAG00000013777	YBX3	79	89.492	Equus_caballus
ENSCANG00000036801	YBX3	90	91.901	ENSEEUG00000010415	YBX3	100	91.901	Erinaceus_europaeus
ENSCANG00000036801	YBX3	94	94.915	ENSFCAG00000027748	YBX3	79	94.915	Felis_catus
ENSCANG00000036801	YBX3	88	94.444	ENSFALG00000003661	YBX3	71	98.837	Ficedula_albicollis
ENSCANG00000036801	YBX3	91	84.669	ENSFDAG00000021192	YBX3	92	83.624	Fukomys_damarensis
ENSCANG00000036801	YBX3	89	83.182	ENSGALG00000031890	YBX3	70	97.849	Gallus_gallus
ENSCANG00000036801	YBX3	90	85.068	ENSGAGG00000017780	YBX3	77	84.305	Gopherus_agassizii
ENSCANG00000036801	YBX3	100	98.413	ENSGGOG00000001352	YBX3	84	98.413	Gorilla_gorilla
ENSCANG00000036801	YBX3	87	78.909	ENSHGLG00000015495	-	80	76.000	Heterocephalus_glaber_female
ENSCANG00000036801	YBX3	96	75.490	ENSHGLG00000014798	-	86	76.431	Heterocephalus_glaber_female
ENSCANG00000036801	YBX3	89	88.532	ENSHGLG00100003589	YBX3	87	88.532	Heterocephalus_glaber_male
ENSCANG00000036801	YBX3	91	86.411	ENSSTOG00000002108	-	88	86.411	Ictidomys_tridecemlineatus
ENSCANG00000036801	YBX3	94	87.119	ENSSTOG00000032577	-	83	87.458	Ictidomys_tridecemlineatus
ENSCANG00000036801	YBX3	94	69.024	ENSJJAG00000014239	Ybx3	96	85.227	Jaculus_jaculus
ENSCANG00000036801	YBX3	94	94.237	ENSLAFG00000017247	YBX3	87	87.797	Loxodonta_africana
ENSCANG00000036801	YBX3	100	98.413	ENSMFAG00000039369	YBX3	85	98.413	Macaca_fascicularis
ENSCANG00000036801	YBX3	100	98.413	ENSMMUG00000022469	YBX3	97	98.413	Macaca_mulatta
ENSCANG00000036801	YBX3	100	98.413	ENSMNEG00000045109	YBX3	85	98.413	Macaca_nemestrina
ENSCANG00000036801	YBX3	91	98.606	ENSMLEG00000033618	YBX3	81	98.258	Mandrillus_leucophaeus
ENSCANG00000036801	YBX3	86	98.095	ENSMGAG00000014224	YBX3	93	100.000	Meleagris_gallopavo
ENSCANG00000036801	YBX3	100	88.889	ENSMAUG00000012185	Ybx3	92	90.169	Mesocricetus_auratus
ENSCANG00000036801	YBX3	93	94.881	ENSMICG00000038002	-	79	94.576	Microcebus_murinus
ENSCANG00000036801	YBX3	97	79.079	ENSMICG00000031459	-	79	77.434	Microcebus_murinus
ENSCANG00000036801	YBX3	98	89.968	ENSMOCG00000016291	Ybx3	96	90.847	Microtus_ochrogaster
ENSCANG00000036801	YBX3	91	82.578	ENSMODG00000018248	YBX3	91	82.986	Monodelphis_domestica
ENSCANG00000036801	YBX3	100	88.571	MGP_CAROLIEiJ_G0028947	Ybx3	81	89.831	Mus_caroli
ENSCANG00000036801	YBX3	100	88.571	ENSMUSG00000030189	Ybx3	81	89.831	Mus_musculus
ENSCANG00000036801	YBX3	100	89.206	MGP_PahariEiJ_G0022709	Ybx3	81	90.508	Mus_pahari
ENSCANG00000036801	YBX3	100	88.889	MGP_SPRETEiJ_G0029994	Ybx3	81	90.169	Mus_spretus
ENSCANG00000036801	YBX3	93	78.073	ENSMPUG00000011810	YBX3	80	76.898	Mustela_putorius_furo
ENSCANG00000036801	YBX3	84	93.680	ENSMLUG00000007476	YBX3	100	91.822	Myotis_lucifugus
ENSCANG00000036801	YBX3	94	85.522	ENSNGAG00000000710	Ybx3	91	82.895	Nannospalax_galili
ENSCANG00000036801	YBX3	100	94.603	ENSNLEG00000034844	YBX3	90	94.603	Nomascus_leucogenys
ENSCANG00000036801	YBX3	63	68.932	ENSMEUG00000002507	-	81	76.879	Notamacropus_eugenii
ENSCANG00000036801	YBX3	89	83.154	ENSODEG00000017957	YBX3	87	82.373	Octodon_degus
ENSCANG00000036801	YBX3	94	87.119	ENSOCUG00000001889	YBX3	85	86.780	Oryctolagus_cuniculus
ENSCANG00000036801	YBX3	89	98.165	ENSOGAG00000013245	YBX3	80	90.728	Otolemur_garnettii
ENSCANG00000036801	YBX3	85	98.980	ENSOARG00000020919	YBX3	99	82.155	Ovis_aries
ENSCANG00000036801	YBX3	99	97.749	ENSPPAG00000039068	YBX3	87	97.749	Pan_paniscus
ENSCANG00000036801	YBX3	94	94.576	ENSPPRG00000005859	YBX3	79	94.576	Panthera_pardus
ENSCANG00000036801	YBX3	90	92.632	ENSPTIG00000005322	YBX3	81	91.986	Panthera_tigris_altaica
ENSCANG00000036801	YBX3	100	98.413	ENSPTRG00000004681	YBX3	84	98.413	Pan_troglodytes
ENSCANG00000036801	YBX3	100	98.413	ENSPANG00000010280	YBX3	85	98.413	Papio_anubis
ENSCANG00000036801	YBX3	88	84.722	ENSPSIG00000009247	YBX3	95	100.000	Pelodiscus_sinensis
ENSCANG00000036801	YBX3	100	88.889	ENSPEMG00000012132	-	92	91.186	Peromyscus_maniculatus_bairdii
ENSCANG00000036801	YBX3	100	87.805	ENSPEMG00000010391	-	85	90.708	Peromyscus_maniculatus_bairdii
ENSCANG00000036801	YBX3	82	81.154	ENSPCIG00000029949	YBX3	100	79.231	Phascolarctos_cinereus
ENSCANG00000036801	YBX3	100	98.095	ENSPPYG00000004279	YBX3	85	98.095	Pongo_abelii
ENSCANG00000036801	YBX3	67	96.875	ENSPCAG00000001397	YBX3	73	94.286	Procavia_capensis
ENSCANG00000036801	YBX3	58	91.803	ENSPCOG00000011663	YBX3	71	91.803	Propithecus_coquereli
ENSCANG00000036801	YBX3	94	78.716	ENSPVAG00000006740	YBX3	56	95.714	Pteropus_vampyrus
ENSCANG00000036801	YBX3	100	89.841	ENSRNOG00000005480	Ybx3	81	91.186	Rattus_norvegicus
ENSCANG00000036801	YBX3	100	98.780	ENSRBIG00000039208	YBX3	85	98.730	Rhinopithecus_bieti
ENSCANG00000036801	YBX3	100	99.187	ENSRROG00000029638	YBX3	85	99.048	Rhinopithecus_roxellana
ENSCANG00000036801	YBX3	99	91.401	ENSSBOG00000030573	YBX3	87	95.593	Saimiri_boliviensis_boliviensis
ENSCANG00000036801	YBX3	80	98.837	ENSSHAG00000003262	YBX3	98	79.725	Sarcophilus_harrisii
ENSCANG00000036801	YBX3	57	89.362	ENSSPUG00000009911	-	66	88.571	Sphenodon_punctatus
ENSCANG00000036801	YBX3	92	94.138	ENSSSCG00000000633	YBX3	76	95.255	Sus_scrofa
ENSCANG00000036801	YBX3	87	97.143	ENSTGUG00000012047	YBX3	75	97.143	Taeniopygia_guttata
ENSCANG00000036801	YBX3	98	91.909	ENSTBEG00000012570	YBX3	81	94.198	Tupaia_belangeri
ENSCANG00000036801	YBX3	83	84.211	ENSTTRG00000008045	YBX3	100	84.211	Tursiops_truncatus
ENSCANG00000036801	YBX3	88	89.209	ENSUAMG00000016662	YBX3	100	88.849	Ursus_americanus
ENSCANG00000036801	YBX3	90	92.632	ENSUMAG00000016118	YBX3	94	91.986	Ursus_maritimus
ENSCANG00000036801	YBX3	71	100.000	ENSVPAG00000000876	YBX3	100	72.887	Vicugna_pacos
ENSCANG00000036801	YBX3	88	89.209	ENSVVUG00000004956	YBX3	100	88.849	Vulpes_vulpes
ENSCANG00000036801	YBX3	89	72.072	ENSXETG00000016239	ybx3	90	65.487	Xenopus_tropicalis