EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCANG00000037530 (Gene tree)
Gene ID
105502457
Gene Symbol
PABPC1L
Alias
C20orf119|PABPC1L1|dJ1069P2.3|ePAB
Full Name
poly(A) binding protein cytoplasmic 1 like
Gene Type
protein_coding
Species
Colobus_angolensis_palliatus
Status
putative
Strand
Minus strand
Length
30017 bases
Position
chrKN985766.1:8718703-8748719
Accession
105502457
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCANP00000028250PABPPF00658.181.4e-2011
ENSCANP00000028222PABPPF00658.182.1e-1611
ENSCANP00000028250RRM_5PF13893.64.3e-1011
ENSCANP00000028250RRM_1PF00076.221.7e-9014
ENSCANP00000028250RRM_1PF00076.221.7e-9024
ENSCANP00000028250RRM_1PF00076.221.7e-9034
ENSCANP00000028250RRM_1PF00076.221.7e-9044
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCANT00000051288PABPC1L-2021839XM_011928976ENSCANP00000028250612 (aa)XP_011784366A0A2K5JHE9
ENSCANT00000051259PABPC1L-201420-ENSCANP00000028222139 (aa)-A0A2K5JHB3
Gene Model
Click here to download ENSCANG00000037530's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000037530's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCANG00000037530PABPC1L5945.000ENSCANG00000001893RBM235045.000
ENSCANG00000037530PABPC1L5930.994ENSCANG00000017395TIAL19030.994
ENSCANG00000037530PABPC1L6135.616ENSCANG00000038866CELF39235.616
ENSCANG00000037530PABPC1L7041.429ENSCANG00000043683ELAVL48833.735
ENSCANG00000037530PABPC1L9961.927ENSCANG00000041712PABPC39861.844
ENSCANG00000037530PABPC1L5140.260ENSCANG00000037000CIRBP6037.349
ENSCANG00000037530PABPC1L6259.551ENSCANG00000011473PABPC59659.504
ENSCANG00000037530PABPC1L6370.866ENSCANG00000036233-10070.866
ENSCANG00000037530PABPC1L5630.769ENSCANG00000041992HNRNPA18830.769
ENSCANG00000037530PABPC1L5631.707ENSCANG00000038062HNRNPA05332.692
ENSCANG00000037530PABPC1L9961.575ENSCANG00000021524PABPC19861.575
ENSCANG00000037530PABPC1L5942.500ENSCANG00000031033-5342.500
ENSCANG00000037530PABPC1L6134.940ENSCANG00000043179ELAVL29234.940
ENSCANG00000037530PABPC1L9864.157ENSCANG00000034177PABPC49864.239
ENSCANG00000037530PABPC1L5436.047ENSCANG00000033443CELF26136.047
ENSCANG00000037530PABPC1L5630.128ENSCANG00000028832-6230.128
ENSCANG00000037530PABPC1L7940.000ENSCANG00000013549-9545.520
ENSCANG00000037530PABPC1L5934.568ENSCANG00000041972ELAVL19431.188
ENSCANG00000037530PABPC1L5435.135ENSCANG00000032689CELF16635.135
ENSCANG00000037530PABPC1L6263.085ENSCANG00000037677PABPC4L9863.085
ENSCANG00000037530PABPC1L6338.571ENSCANG00000038728ELAVL39033.735
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCANG00000037530PABPC1L10093.740ENSG00000101104PABPC1L9999.691Homo_sapiens
ENSCANG00000037530PABPC1L9963.893ENSAPOG00000010842pabpc1l9964.308Acanthochromis_polyacanthus
ENSCANG00000037530PABPC1L9974.114ENSAMEG00000004099PABPC1L10074.387Ailuropoda_melanoleuca
ENSCANG00000037530PABPC1L9966.505ENSACIG00000021004-9577.778Amphilophus_citrinellus
ENSCANG00000037530PABPC1L9964.019ENSAOCG00000006167-9964.330Amphiprion_ocellaris
ENSCANG00000037530PABPC1L9965.556ENSAPEG00000010558-9781.188Amphiprion_percula
ENSCANG00000037530PABPC1L9966.240ENSATEG00000007428pabpc1l9966.134Anabas_testudineus
ENSCANG00000037530PABPC1L9770.323ENSAPLG00000008415PABPC1L9870.418Anas_platyrhynchos
ENSCANG00000037530PABPC1L9970.709ENSACAG00000011841PABPC1L9870.551Anolis_carolinensis
ENSCANG00000037530PABPC1L10091.172ENSANAG00000026826PABPC1L10091.172Aotus_nancymaae
ENSCANG00000037530PABPC1L9966.026ENSACLG00000024791pabpc1l9966.026Astatotilapia_calliptera
ENSCANG00000037530PABPC1L9967.402ENSAMXG00000013552pabpc1l9966.877Astyanax_mexicanus
ENSCANG00000037530PABPC1L6876.389ENSBTAG00000016849PABPC1L8578.495Bos_taurus
ENSCANG00000037530PABPC1L8552.667ENSBTAG00000050862-8159.873Bos_taurus
ENSCANG00000037530PABPC1L5997.024ENSBTAG00000055300-10097.024Bos_taurus
ENSCANG00000037530PABPC1L10091.653ENSCJAG00000017628PABPC1L10091.653Callithrix_jacchus
ENSCANG00000037530PABPC1L6077.011ENSCJAG00000038506-10077.011Callithrix_jacchus
ENSCANG00000037530PABPC1L9971.803ENSCAFG00000009573PABPC1L10071.938Canis_familiaris
ENSCANG00000037530PABPC1L9983.495ENSCAFG00020013828PABPC1L9983.495Canis_lupus_dingo
ENSCANG00000037530PABPC1L9782.702ENSCHIG00000025759PABPC1L9182.702Capra_hircus
ENSCANG00000037530PABPC1L10083.467ENSTSYG00000006645PABPC1L10083.467Carlito_syrichta
ENSCANG00000037530PABPC1L9975.269ENSCAPG00000014519PABPC1L10075.269Cavia_aperea
ENSCANG00000037530PABPC1L10079.014ENSCPOG00000013633PABPC1L10079.014Cavia_porcellus
ENSCANG00000037530PABPC1L10090.530ENSCCAG00000023338PABPC1L10090.530Cebus_capucinus
ENSCANG00000037530PABPC1L10093.900ENSCATG00000034065PABPC1L10093.900Cercocebus_atys
ENSCANG00000037530PABPC1L10076.789ENSCLAG00000005298PABPC1L10078.060Chinchilla_lanigera
ENSCANG00000037530PABPC1L10093.740ENSCSAG00000014242PABPC1L10093.740Chlorocebus_sabaeus
ENSCANG00000037530PABPC1L7381.982ENSCPBG00000017755-9981.982Chrysemys_picta_bellii
ENSCANG00000037530PABPC1L8253.390ENSCPBG00000017765-7555.660Chrysemys_picta_bellii
ENSCANG00000037530PABPC1L5379.545ENSCPBG00000007810-8379.545Chrysemys_picta_bellii
ENSCANG00000037530PABPC1L9745.418ENSCING00000002796-9744.821Ciona_intestinalis
ENSCANG00000037530PABPC1L7679.661ENSCSAVG00000004246-8979.661Ciona_savignyi
ENSCANG00000037530PABPC1L9854.961ENSCSAVG00000003102-10081.507Ciona_savignyi
ENSCANG00000037530PABPC1L9973.280ENSCGRG00001021938Pabpc1l9973.280Cricetulus_griseus_chok1gshd
ENSCANG00000037530PABPC1L9973.280ENSCGRG00000007946Pabpc1l9973.280Cricetulus_griseus_crigri
ENSCANG00000037530PABPC1L9863.636ENSCSEG00000021295pabpc1l9963.682Cynoglossus_semilaevis
ENSCANG00000037530PABPC1L9966.238ENSCVAG00000015943-8686.154Cyprinodon_variegatus
ENSCANG00000037530PABPC1L9966.562ENSDARG00000002597pabpc1l8886.154Danio_rerio
ENSCANG00000037530PABPC1L9985.370ENSDNOG00000048450PABPC1L9985.370Dasypus_novemcinctus
ENSCANG00000037530PABPC1L9982.126ENSDORG00000001067Pabpc1l9982.126Dipodomys_ordii
ENSCANG00000037530PABPC1L9691.057ENSETEG00000009969PABPC1L7391.057Echinops_telfairi
ENSCANG00000037530PABPC1L5488.485ENSEASG00005023407-6788.485Equus_asinus_asinus
ENSCANG00000037530PABPC1L8257.534ENSEASG00005023406-8559.184Equus_asinus_asinus
ENSCANG00000037530PABPC1L5995.833ENSEASG00005023408-10095.833Equus_asinus_asinus
ENSCANG00000037530PABPC1L6786.522ENSECAG00000040139-8286.522Equus_caballus
ENSCANG00000037530PABPC1L8554.667ENSECAG00000022681PABPC1L9360.000Equus_caballus
ENSCANG00000037530PABPC1L10079.100ENSEEUG00000005978PABPC1L10079.100Erinaceus_europaeus
ENSCANG00000037530PABPC1L9967.033ENSELUG00000001811pabpc1l9966.824Esox_lucius
ENSCANG00000037530PABPC1L9984.142ENSFCAG00000011692PABPC1L9984.142Felis_catus
ENSCANG00000037530PABPC1L8576.091ENSFALG00000005372PABPC1L8776.091Ficedula_albicollis
ENSCANG00000037530PABPC1L10079.608ENSFDAG00000008291PABPC1L10079.608Fukomys_damarensis
ENSCANG00000037530PABPC1L9967.416ENSFHEG00000003398pabpc1l9967.203Fundulus_heteroclitus
ENSCANG00000037530PABPC1L9965.287ENSGMOG00000004437pabpc1l9865.280Gadus_morhua
ENSCANG00000037530PABPC1L9768.276ENSGALG00000004123PABPC1L9983.453Gallus_gallus
ENSCANG00000037530PABPC1L9963.126ENSGAFG00000021057pabpc1l9962.766Gambusia_affinis
ENSCANG00000037530PABPC1L9964.567ENSGACG00000002792pabpc1l9964.409Gasterosteus_aculeatus
ENSCANG00000037530PABPC1L9971.949ENSGAGG00000000589PABPC1L8784.262Gopherus_agassizii
ENSCANG00000037530PABPC1L10093.419ENSGGOG00000004584PABPC1L10093.419Gorilla_gorilla
ENSCANG00000037530PABPC1L9965.865ENSHBUG00000006134pabpc1l9965.865Haplochromis_burtoni
ENSCANG00000037530PABPC1L10079.173ENSHGLG00000008434PABPC1L10079.173Heterocephalus_glaber_female
ENSCANG00000037530PABPC1L10079.173ENSHGLG00100012151PABPC1L10079.173Heterocephalus_glaber_male
ENSCANG00000037530PABPC1L5982.022ENSHGLG00100019506-10082.022Heterocephalus_glaber_male
ENSCANG00000037530PABPC1L9965.289ENSHCOG00000009270pabpc1l9965.296Hippocampus_comes
ENSCANG00000037530PABPC1L6062.069ENSIPUG00000006760-8862.069Ictalurus_punctatus
ENSCANG00000037530PABPC1L9967.350ENSIPUG00000012602pabpc1l9967.350Ictalurus_punctatus
ENSCANG00000037530PABPC1L5364.615ENSIPUG00000005537-10064.615Ictalurus_punctatus
ENSCANG00000037530PABPC1L6062.644ENSIPUG00000006780-8562.644Ictalurus_punctatus
ENSCANG00000037530PABPC1L10083.628ENSSTOG00000003739PABPC1L10083.628Ictidomys_tridecemlineatus
ENSCANG00000037530PABPC1L9964.222ENSJJAG00000022406Pabpc1l9961.120Jaculus_jaculus
ENSCANG00000037530PABPC1L9966.773ENSKMAG00000016847pabpc1l9966.667Kryptolebias_marmoratus
ENSCANG00000037530PABPC1L9964.174ENSLBEG00000010084pabpc1l9963.863Labrus_bergylta
ENSCANG00000037530PABPC1L9968.495ENSLACG00000005762PABPC1L9868.289Latimeria_chalumnae
ENSCANG00000037530PABPC1L9967.350ENSLOCG00000007519pabpc1l9867.299Lepisosteus_oculatus
ENSCANG00000037530PABPC1L9981.359ENSLAFG00000003553PABPC1L10081.359Loxodonta_africana
ENSCANG00000037530PABPC1L10093.900ENSMFAG00000040365PABPC1L10093.900Macaca_fascicularis
ENSCANG00000037530PABPC1L8175.000ENSMMUG00000013209-9175.000Macaca_mulatta
ENSCANG00000037530PABPC1L10093.600ENSMNEG00000032298PABPC1L10093.600Macaca_nemestrina
ENSCANG00000037530PABPC1L10093.900ENSMLEG00000043139PABPC1L10093.900Mandrillus_leucophaeus
ENSCANG00000037530PABPC1L9765.105ENSMAMG00000011854pabpc1l9765.049Mastacembelus_armatus
ENSCANG00000037530PABPC1L9966.026ENSMZEG00005023713pabpc1l9966.026Maylandia_zebra
ENSCANG00000037530PABPC1L9971.111ENSMGAG00000003674PABPC1L9871.111Meleagris_gallopavo
ENSCANG00000037530PABPC1L8563.333ENSMICG00000000974-9167.081Microcebus_murinus
ENSCANG00000037530PABPC1L9971.360ENSMOCG00000013186Pabpc1l9971.360Microtus_ochrogaster
ENSCANG00000037530PABPC1L9965.064ENSMMOG00000020574-9086.154Mola_mola
ENSCANG00000037530PABPC1L9775.862ENSMODG00000016198PABPC1L9975.698Monodelphis_domestica
ENSCANG00000037530PABPC1L9763.738ENSMALG00000021622pabpc1l10063.520Monopterus_albus
ENSCANG00000037530PABPC1L9973.430MGP_CAROLIEiJ_G0024627Pabpc1l9973.430Mus_caroli
ENSCANG00000037530PABPC1L9973.269ENSMUSG00000054582Pabpc1l9973.269Mus_musculus
ENSCANG00000037530PABPC1L9973.633MGP_PahariEiJ_G0026071Pabpc1l9973.633Mus_pahari
ENSCANG00000037530PABPC1L9973.430MGP_SPRETEiJ_G0025549Pabpc1l9973.430Mus_spretus
ENSCANG00000037530PABPC1L9981.600ENSMPUG00000017646PABPC1L9981.600Mustela_putorius_furo
ENSCANG00000037530PABPC1L9874.404ENSMLUG00000006324PABPC1L9774.404Myotis_lucifugus
ENSCANG00000037530PABPC1L9975.399ENSNGAG00000010458Pabpc1l9975.399Nannospalax_galili
ENSCANG00000037530PABPC1L9965.610ENSNBRG00000016633pabpc1l9972.554Neolamprologus_brichardi
ENSCANG00000037530PABPC1L9173.585ENSNLEG00000006653-9375.758Nomascus_leucogenys
ENSCANG00000037530PABPC1L7979.210ENSMEUG00000007905-7879.210Notamacropus_eugenii
ENSCANG00000037530PABPC1L10082.212ENSOPRG00000011846PABPC1L10082.212Ochotona_princeps
ENSCANG00000037530PABPC1L5875.000ENSODEG00000002920-9775.000Octodon_degus
ENSCANG00000037530PABPC1L10070.880ENSODEG00000015482PABPC1L10070.880Octodon_degus
ENSCANG00000037530PABPC1L9964.882ENSONIG00000017314pabpc1l9964.882Oreochromis_niloticus
ENSCANG00000037530PABPC1L8666.792ENSOANG00000015793-9466.792Ornithorhynchus_anatinus
ENSCANG00000037530PABPC1L9978.428ENSOCUG00000003005PABPC1L10078.428Oryctolagus_cuniculus
ENSCANG00000037530PABPC1L9965.024ENSORLG00000010322pabpc1l9972.902Oryzias_latipes
ENSCANG00000037530PABPC1L9965.024ENSORLG00020021193pabpc1l9972.902Oryzias_latipes_hni
ENSCANG00000037530PABPC1L9964.865ENSORLG00015017018pabpc1l9972.902Oryzias_latipes_hsok
ENSCANG00000037530PABPC1L9962.162ENSOMEG00000010789pabpc1l9961.955Oryzias_melastigma
ENSCANG00000037530PABPC1L9982.862ENSOGAG00000032999PABPC1L10082.862Otolemur_garnettii
ENSCANG00000037530PABPC1L9983.199ENSOARG00000004578PABPC1L9983.199Ovis_aries
ENSCANG00000037530PABPC1L10093.579ENSPPAG00000039677PABPC1L10093.579Pan_paniscus
ENSCANG00000037530PABPC1L8258.621ENSPPRG00000020242-9060.563Panthera_pardus
ENSCANG00000037530PABPC1L6382.099ENSPPRG00000019327-9882.099Panthera_pardus
ENSCANG00000037530PABPC1L9884.150ENSPTIG00000006524PABPC1L9984.150Panthera_tigris_altaica
ENSCANG00000037530PABPC1L9175.472ENSPTRG00000044192-9377.576Pan_troglodytes
ENSCANG00000037530PABPC1L6399.383ENSPTRG00000013531PABPC1L9999.383Pan_troglodytes
ENSCANG00000037530PABPC1L10095.185ENSPANG00000018788PABPC1L10095.185Papio_anubis
ENSCANG00000037530PABPC1L9967.405ENSPKIG00000007322pabpc1l9966.984Paramormyrops_kingsleyae
ENSCANG00000037530PABPC1L5381.679ENSPKIG00000016810-9381.679Paramormyrops_kingsleyae
ENSCANG00000037530PABPC1L6883.693ENSPSIG00000013289PABPC1L9983.693Pelodiscus_sinensis
ENSCANG00000037530PABPC1L7267.337ENSPMGG00000023121-9367.172Periophthalmus_magnuspinnatus
ENSCANG00000037530PABPC1L5486.364ENSPMGG00000023117pabpc1l9286.364Periophthalmus_magnuspinnatus
ENSCANG00000037530PABPC1L9973.108ENSPEMG00000020671Pabpc1l9973.269Peromyscus_maniculatus_bairdii
ENSCANG00000037530PABPC1L9966.828ENSPFOG00000013241pabpc1l9965.655Poecilia_formosa
ENSCANG00000037530PABPC1L9965.869ENSPLAG00000017490-9965.815Poecilia_latipinna
ENSCANG00000037530PABPC1L5386.923ENSPLAG00000023686-9286.923Poecilia_latipinna
ENSCANG00000037530PABPC1L5386.923ENSPMEG00000009185-8886.923Poecilia_mexicana
ENSCANG00000037530PABPC1L9966.294ENSPMEG00000007677pabpc1l9965.920Poecilia_mexicana
ENSCANG00000037530PABPC1L8147.788ENSPREG00000015197-5671.831Poecilia_reticulata
ENSCANG00000037530PABPC1L6776.998ENSPREG00000015886pabpc1l9976.998Poecilia_reticulata
ENSCANG00000037530PABPC1L10093.579ENSPPYG00000011042PABPC1L10093.579Pongo_abelii
ENSCANG00000037530PABPC1L6293.750ENSPCAG00000011787-7593.750Procavia_capensis
ENSCANG00000037530PABPC1L9984.715ENSPCOG00000020630PABPC1L9984.715Propithecus_coquereli
ENSCANG00000037530PABPC1L9980.775ENSPVAG00000012663PABPC1L9980.775Pteropus_vampyrus
ENSCANG00000037530PABPC1L9967.323ENSPNYG00000004101pabpc1l9972.554Pundamilia_nyererei
ENSCANG00000037530PABPC1L9960.568ENSPNAG00000021248pabpc1l9960.190Pygocentrus_nattereri
ENSCANG00000037530PABPC1L9973.642ENSRNOG00000012750Pabpc1l10073.802Rattus_norvegicus
ENSCANG00000037530PABPC1L10093.900ENSRBIG00000035381PABPC1L10093.900Rhinopithecus_bieti
ENSCANG00000037530PABPC1L10093.740ENSRROG00000044498PABPC1L10093.740Rhinopithecus_roxellana
ENSCANG00000037530PABPC1L10091.172ENSSBOG00000009532-10091.172Saimiri_boliviensis_boliviensis
ENSCANG00000037530PABPC1L9872.917ENSSBOG00000020828-9274.242Saimiri_boliviensis_boliviensis
ENSCANG00000037530PABPC1L9769.076ENSSHAG00000011446PABPC1L10069.076Sarcophilus_harrisii
ENSCANG00000037530PABPC1L9968.404ENSSFOG00015017304pabpc1l9968.038Scleropages_formosus
ENSCANG00000037530PABPC1L8778.261ENSSMAG00000010516pabpc1l9887.597Scophthalmus_maximus
ENSCANG00000037530PABPC1L9965.000ENSSDUG00000014743pabpc1l9965.000Seriola_dumerili
ENSCANG00000037530PABPC1L9665.025ENSSLDG00000006981pabpc1l9877.169Seriola_lalandi_dorsalis
ENSCANG00000037530PABPC1L9969.620ENSSPUG00000004233PABPC1L9869.620Sphenodon_punctatus
ENSCANG00000037530PABPC1L9964.191ENSSPAG00000017137pabpc1l9964.356Stegastes_partitus
ENSCANG00000037530PABPC1L9982.820ENSSSCG00000007382PABPC1L9982.820Sus_scrofa
ENSCANG00000037530PABPC1L9971.094ENSTGUG00000005114PABPC1L9971.094Taeniopygia_guttata
ENSCANG00000037530PABPC1L9764.160ENSTRUG00000011085pabpc1l9764.160Takifugu_rubripes
ENSCANG00000037530PABPC1L9962.992ENSTNIG00000017903pabpc1l9862.992Tetraodon_nigroviridis
ENSCANG00000037530PABPC1L9494.521ENSTBEG00000002851PABPC1L8094.521Tupaia_belangeri
ENSCANG00000037530PABPC1L9481.538ENSTTRG00000007618PABPC1L10081.697Tursiops_truncatus
ENSCANG00000037530PABPC1L9984.132ENSUAMG00000017682PABPC1L9984.132Ursus_americanus
ENSCANG00000037530PABPC1L6790.786ENSUMAG00000025436PABPC1L9490.786Ursus_maritimus
ENSCANG00000037530PABPC1L9893.281ENSVVUG00000018939PABPC1L9993.281Vulpes_vulpes
ENSCANG00000037530PABPC1L9966.983ENSXETG00000022831pabpc1l9866.984Xenopus_tropicalis
ENSCANG00000037530PABPC1L9966.400ENSXCOG00000005459pabpc1l9982.270Xiphophorus_couchianus
ENSCANG00000037530PABPC1L9966.188ENSXMAG00000017135pabpc1l9965.815Xiphophorus_maculatus

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