EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCANG00000037641 (Gene tree)
Gene ID: 105523633
Gene Symbol: CHD3
Alias: Mi-2a|Mi2-ALPHA|ZFH
Full Name: chromodomain helicase DNA binding protein 3
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Plus strand
Length: 31345 bases
Position: chrKN983413.1:3981787-4013131
Accession: 105523633
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000028477	ResIII	PF04851.15	2.6e-08	1	1
ENSCANP00000028470	ResIII	PF04851.15	2.6e-08	1	1
ENSCANP00000028462	ResIII	PF04851.15	2.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000051519	CHD3-201	7342	XM_011958569	ENSCANP00000028462	2000 (aa)	XP_011813959	A0A2K5JI01
ENSCANT00000051527	CHD3-202	7240	XM_011958570	ENSCANP00000028470	1966 (aa)	XP_011813960	A0A2K5JI05
ENSCANT00000051535	CHD3-203	5496	-	ENSCANP00000028477	1831 (aa)	-	A0A2K5JI17

Gene Model

Click here to download ENSCANG00000037641's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000037641's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCANG00000037641	CHD3	98	66.667	ENSCANG00000032302	CHD5	98	69.034
ENSCANG00000037641	CHD3	82	83.193	ENSCANG00000035317	-	92	71.484

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000037641	CHD3	100	99.593	ENSG00000170004	CHD3	100	99.593	Homo_sapiens
ENSCANG00000037641	CHD3	86	80.208	ENSAPOG00000005614	chd3	94	80.208	Acanthochromis_polyacanthus
ENSCANG00000037641	CHD3	74	93.223	ENSAMEG00000003025	-	100	97.141	Ailuropoda_melanoleuca
ENSCANG00000037641	CHD3	90	75.396	ENSACIG00000019671	chd3	99	83.516	Amphilophus_citrinellus
ENSCANG00000037641	CHD3	91	81.100	ENSAOCG00000023784	chd3	97	81.603	Amphiprion_ocellaris
ENSCANG00000037641	CHD3	91	80.756	ENSAPEG00000006341	chd3	95	77.728	Amphiprion_percula
ENSCANG00000037641	CHD3	91	81.315	ENSATEG00000000848	chd3	95	82.105	Anabas_testudineus
ENSCANG00000037641	CHD3	99	82.620	ENSACAG00000004276	CHD3	96	84.627	Anolis_carolinensis
ENSCANG00000037641	CHD3	100	96.350	ENSANAG00000034323	CHD3	99	99.200	Aotus_nancymaae
ENSCANG00000037641	CHD3	94	78.816	ENSACLG00000009222	chd3	99	74.699	Astatotilapia_calliptera
ENSCANG00000037641	CHD3	98	98.223	ENSBTAG00000014377	CHD3	97	98.229	Bos_taurus
ENSCANG00000037641	CHD3	99	99.185	ENSCJAG00000014766	CHD3	99	99.185	Callithrix_jacchus
ENSCANG00000037641	CHD3	100	97.751	ENSCAFG00000016859	CHD3	100	97.751	Canis_familiaris
ENSCANG00000037641	CHD3	99	95.307	ENSCAFG00020007422	CHD3	100	98.254	Canis_lupus_dingo
ENSCANG00000037641	CHD3	99	98.484	ENSCHIG00000016737	CHD3	100	98.484	Capra_hircus
ENSCANG00000037641	CHD3	100	98.831	ENSTSYG00000035658	CHD3	100	98.831	Carlito_syrichta
ENSCANG00000037641	CHD3	99	94.631	ENSCAPG00000014864	CHD3	99	94.631	Cavia_aperea
ENSCANG00000037641	CHD3	99	97.140	ENSCPOG00000022653	CHD3	99	97.140	Cavia_porcellus
ENSCANG00000037641	CHD3	100	99.000	ENSCCAG00000034792	CHD3	100	99.000	Cebus_capucinus
ENSCANG00000037641	CHD3	100	99.898	ENSCATG00000041717	CHD3	100	99.898	Cercocebus_atys
ENSCANG00000037641	CHD3	98	98.345	ENSCLAG00000010523	CHD3	100	98.345	Chinchilla_lanigera
ENSCANG00000037641	CHD3	98	99.644	ENSCSAG00000011122	CHD3	100	99.644	Chlorocebus_sabaeus
ENSCANG00000037641	CHD3	92	83.672	ENSCPBG00000011966	CHD3	99	87.701	Chrysemys_picta_bellii
ENSCANG00000037641	CHD3	98	97.570	ENSCGRG00001011306	Chd3	100	97.570	Cricetulus_griseus_chok1gshd
ENSCANG00000037641	CHD3	93	97.794	ENSCGRG00000007878	Chd3	99	97.794	Cricetulus_griseus_crigri
ENSCANG00000037641	CHD3	92	79.605	ENSCSEG00000004489	chd3	99	76.090	Cynoglossus_semilaevis
ENSCANG00000037641	CHD3	89	82.072	ENSCVAG00000007293	chd3	95	82.661	Cyprinodon_variegatus
ENSCANG00000037641	CHD3	98	73.542	ENSDARG00000021405	chd3	99	76.480	Danio_rerio
ENSCANG00000037641	CHD3	98	83.713	ENSDNOG00000047846	CHD3	98	83.713	Dasypus_novemcinctus
ENSCANG00000037641	CHD3	98	97.826	ENSDORG00000010713	Chd3	100	97.826	Dipodomys_ordii
ENSCANG00000037641	CHD3	98	90.298	ENSETEG00000017733	CHD3	100	92.060	Echinops_telfairi
ENSCANG00000037641	CHD3	54	77.758	ENSEBUG00000008310	chd3	99	70.250	Eptatretus_burgeri
ENSCANG00000037641	CHD3	99	95.685	ENSEASG00005019360	CHD3	100	98.636	Equus_asinus_asinus
ENSCANG00000037641	CHD3	99	95.739	ENSECAG00000010051	CHD3	100	98.691	Equus_caballus
ENSCANG00000037641	CHD3	92	98.305	ENSEEUG00000015205	CHD3	92	100.000	Erinaceus_europaeus
ENSCANG00000037641	CHD3	84	90.476	ENSELUG00000019499	chd3	99	90.476	Esox_lucius
ENSCANG00000037641	CHD3	98	98.070	ENSFCAG00000009629	CHD3	96	98.070	Felis_catus
ENSCANG00000037641	CHD3	99	95.200	ENSFDAG00000008220	CHD3	99	95.361	Fukomys_damarensis
ENSCANG00000037641	CHD3	89	80.305	ENSGMOG00000013599	chd3	91	80.914	Gadus_morhua
ENSCANG00000037641	CHD3	59	76.966	ENSGAFG00000004055	chd3	99	76.496	Gambusia_affinis
ENSCANG00000037641	CHD3	99	69.761	ENSGACG00000019275	chd3	100	70.896	Gasterosteus_aculeatus
ENSCANG00000037641	CHD3	81	82.272	ENSGAGG00000013164	CHD3	98	87.101	Gopherus_agassizii
ENSCANG00000037641	CHD3	100	99.440	ENSGGOG00000013496	CHD3	100	99.440	Gorilla_gorilla
ENSCANG00000037641	CHD3	98	98.295	ENSHGLG00000012017	CHD3	99	97.247	Heterocephalus_glaber_female
ENSCANG00000037641	CHD3	88	90.870	ENSHGLG00100013902	CHD3	99	90.870	Heterocephalus_glaber_male
ENSCANG00000037641	CHD3	96	71.375	ENSHCOG00000010170	chd3	96	72.857	Hippocampus_comes
ENSCANG00000037641	CHD3	90	77.095	ENSIPUG00000003271	chd3	96	80.848	Ictalurus_punctatus
ENSCANG00000037641	CHD3	99	98.498	ENSSTOG00000025907	CHD3	100	98.965	Ictidomys_tridecemlineatus
ENSCANG00000037641	CHD3	100	96.452	ENSJJAG00000017633	Chd3	100	97.569	Jaculus_jaculus
ENSCANG00000037641	CHD3	87	90.047	ENSKMAG00000019292	chd3	97	75.741	Kryptolebias_marmoratus
ENSCANG00000037641	CHD3	92	74.066	ENSLBEG00000028485	chd3	92	81.008	Labrus_bergylta
ENSCANG00000037641	CHD3	98	72.416	ENSLACG00000008031	CHD3	99	74.324	Latimeria_chalumnae
ENSCANG00000037641	CHD3	99	75.654	ENSLOCG00000013965	chd3	97	77.248	Lepisosteus_oculatus
ENSCANG00000037641	CHD3	94	94.383	ENSLAFG00000000572	CHD3	100	94.383	Loxodonta_africana
ENSCANG00000037641	CHD3	100	99.847	ENSMFAG00000020113	CHD3	100	99.847	Macaca_fascicularis
ENSCANG00000037641	CHD3	100	97.450	ENSMMUG00000022221	CHD3	100	97.450	Macaca_mulatta
ENSCANG00000037641	CHD3	100	99.847	ENSMNEG00000001728	CHD3	100	99.847	Macaca_nemestrina
ENSCANG00000037641	CHD3	100	99.898	ENSMLEG00000032249	CHD3	100	99.898	Mandrillus_leucophaeus
ENSCANG00000037641	CHD3	92	72.487	ENSMAMG00000000564	chd3	99	77.362	Mastacembelus_armatus
ENSCANG00000037641	CHD3	99	96.917	ENSMAUG00000013873	Chd3	99	94.314	Mesocricetus_auratus
ENSCANG00000037641	CHD3	98	98.781	ENSMICG00000008741	CHD3	100	95.414	Microcebus_murinus
ENSCANG00000037641	CHD3	98	97.667	ENSMOCG00000004848	Chd3	100	97.667	Microtus_ochrogaster
ENSCANG00000037641	CHD3	98	72.817	ENSMMOG00000012699	chd3	99	74.029	Mola_mola
ENSCANG00000037641	CHD3	99	90.027	ENSMODG00000007509	CHD3	100	94.556	Monodelphis_domestica
ENSCANG00000037641	CHD3	98	97.472	MGP_CAROLIEiJ_G0016564	Chd3	100	97.561	Mus_caroli
ENSCANG00000037641	CHD3	98	97.420	ENSMUSG00000018474	Chd3	99	97.508	Mus_musculus
ENSCANG00000037641	CHD3	98	97.522	MGP_PahariEiJ_G0017695	Chd3	100	97.613	Mus_pahari
ENSCANG00000037641	CHD3	98	97.420	MGP_SPRETEiJ_G0017400	Chd3	100	97.508	Mus_spretus
ENSCANG00000037641	CHD3	93	94.819	ENSMPUG00000008861	CHD3	100	97.958	Mustela_putorius_furo
ENSCANG00000037641	CHD3	100	96.953	ENSMLUG00000014643	-	100	96.953	Myotis_lucifugus
ENSCANG00000037641	CHD3	99	97.229	ENSNGAG00000000773	Chd3	99	97.229	Nannospalax_galili
ENSCANG00000037641	CHD3	92	72.945	ENSNBRG00000000636	chd3	98	75.899	Neolamprologus_brichardi
ENSCANG00000037641	CHD3	98	96.677	ENSNLEG00000009770	CHD3	100	96.677	Nomascus_leucogenys
ENSCANG00000037641	CHD3	86	91.078	ENSMEUG00000005852	CHD3	87	91.078	Notamacropus_eugenii
ENSCANG00000037641	CHD3	99	93.686	ENSOPRG00000011069	CHD3	100	96.688	Ochotona_princeps
ENSCANG00000037641	CHD3	99	97.387	ENSODEG00000017785	CHD3	100	97.387	Octodon_degus
ENSCANG00000037641	CHD3	98	73.939	ENSONIG00000009292	chd3	100	74.845	Oreochromis_niloticus
ENSCANG00000037641	CHD3	98	93.639	ENSOCUG00000029299	CHD3	100	93.540	Oryctolagus_cuniculus
ENSCANG00000037641	CHD3	81	71.666	ENSORLG00000007107	chd3	93	71.789	Oryzias_latipes
ENSCANG00000037641	CHD3	56	75.315	ENSORLG00020008387	chd3	95	73.698	Oryzias_latipes_hni
ENSCANG00000037641	CHD3	76	76.912	ENSOMEG00000013691	chd3	99	78.181	Oryzias_melastigma
ENSCANG00000037641	CHD3	98	98.223	ENSOGAG00000003216	CHD3	100	98.223	Otolemur_garnettii
ENSCANG00000037641	CHD3	99	95.706	ENSOARG00000017855	CHD3	99	95.706	Ovis_aries
ENSCANG00000037641	CHD3	100	98.530	ENSPPAG00000032886	CHD3	100	98.530	Pan_paniscus
ENSCANG00000037641	CHD3	99	97.609	ENSPPRG00000000626	CHD3	99	97.609	Panthera_pardus
ENSCANG00000037641	CHD3	100	99.644	ENSPTRG00000008714	CHD3	100	99.644	Pan_troglodytes
ENSCANG00000037641	CHD3	100	99.850	ENSPANG00000023938	CHD3	100	99.850	Papio_anubis
ENSCANG00000037641	CHD3	93	80.681	ENSPKIG00000006305	chd3	99	79.102	Paramormyrops_kingsleyae
ENSCANG00000037641	CHD3	59	90.768	ENSPSIG00000010177	CHD3	98	91.042	Pelodiscus_sinensis
ENSCANG00000037641	CHD3	99	96.974	ENSPEMG00000014262	Chd3	100	96.974	Peromyscus_maniculatus_bairdii
ENSCANG00000037641	CHD3	99	93.188	ENSPCIG00000005442	CHD3	97	95.935	Phascolarctos_cinereus
ENSCANG00000037641	CHD3	94	71.581	ENSPFOG00000012464	chd3	86	80.135	Poecilia_formosa
ENSCANG00000037641	CHD3	89	83.534	ENSPLAG00000002887	chd3	96	83.534	Poecilia_latipinna
ENSCANG00000037641	CHD3	53	81.374	ENSPMEG00000016725	chd3	94	73.247	Poecilia_mexicana
ENSCANG00000037641	CHD3	91	84.502	ENSPREG00000011044	chd3	99	79.301	Poecilia_reticulata
ENSCANG00000037641	CHD3	100	94.650	ENSPPYG00000007940	CHD3	100	94.650	Pongo_abelii
ENSCANG00000037641	CHD3	96	97.750	ENSPCAG00000004350	CHD3	96	97.575	Procavia_capensis
ENSCANG00000037641	CHD3	100	98.152	ENSPCOG00000020952	CHD3	100	98.152	Propithecus_coquereli
ENSCANG00000037641	CHD3	86	98.796	ENSPVAG00000016344	CHD3	87	97.260	Pteropus_vampyrus
ENSCANG00000037641	CHD3	94	78.520	ENSPNAG00000020393	chd3	98	81.611	Pygocentrus_nattereri
ENSCANG00000037641	CHD3	99	93.376	ENSRNOG00000009722	Chd3	100	96.678	Rattus_norvegicus
ENSCANG00000037641	CHD3	100	96.701	ENSRBIG00000033562	CHD3	100	96.701	Rhinopithecus_bieti
ENSCANG00000037641	CHD3	100	99.898	ENSRROG00000029554	CHD3	100	99.898	Rhinopithecus_roxellana
ENSCANG00000037641	CHD3	100	99.135	ENSSBOG00000020719	CHD3	100	99.135	Saimiri_boliviensis_boliviensis
ENSCANG00000037641	CHD3	98	94.808	ENSSHAG00000014412	CHD3	100	94.808	Sarcophilus_harrisii
ENSCANG00000037641	CHD3	94	77.919	ENSSFOG00015023123	chd3	98	75.360	Scleropages_formosus
ENSCANG00000037641	CHD3	86	91.304	ENSSMAG00000006451	chd3	99	77.177	Scophthalmus_maximus
ENSCANG00000037641	CHD3	54	74.925	ENSSDUG00000005792	chd3	95	73.535	Seriola_dumerili
ENSCANG00000037641	CHD3	94	77.379	ENSSPAG00000013694	chd3	98	81.053	Stegastes_partitus
ENSCANG00000037641	CHD3	99	98.124	ENSSSCG00000021363	CHD3	100	98.146	Sus_scrofa
ENSCANG00000037641	CHD3	77	74.410	ENSTRUG00000014990	chd3	89	76.269	Takifugu_rubripes
ENSCANG00000037641	CHD3	99	71.792	ENSTNIG00000012998	chd3	99	73.147	Tetraodon_nigroviridis
ENSCANG00000037641	CHD3	68	100.000	ENSTBEG00000011454	-	71	100.000	Tupaia_belangeri
ENSCANG00000037641	CHD3	99	100.000	ENSTTRG00000010295	CHD3	97	99.383	Tursiops_truncatus
ENSCANG00000037641	CHD3	99	94.089	ENSUAMG00000005475	CHD3	99	97.060	Ursus_americanus
ENSCANG00000037641	CHD3	60	100.000	ENSVPAG00000010794	-	62	100.000	Vicugna_pacos
ENSCANG00000037641	CHD3	99	95.307	ENSVVUG00000028011	CHD3	99	98.135	Vulpes_vulpes
ENSCANG00000037641	CHD3	99	71.300	ENSXETG00000012991	chd3	92	73.820	Xenopus_tropicalis
ENSCANG00000037641	CHD3	50	91.429	ENSXCOG00000000809	chd3	96	82.976	Xiphophorus_couchianus
ENSCANG00000037641	CHD3	87	82.967	ENSXMAG00000016035	chd3	99	82.967	Xiphophorus_maculatus