EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCANG00000037677 (Gene tree)
Gene ID: 105507201
Gene Symbol: PABPC4L
Alias: -
Full Name: poly(A) binding protein cytoplasmic 4 like
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Minus strand
Length: 1113 bases
Position: chrKN979885.1:8277742-8278854
Accession: 31955
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000028478	RRM_5	PF13893.6	7.5e-15	1	2
ENSCANP00000028478	RRM_5	PF13893.6	7.5e-15	2	2
ENSCANP00000028478	RRM_1	PF00076.22	2.9e-86	1	4
ENSCANP00000028478	RRM_1	PF00076.22	2.9e-86	2	4
ENSCANP00000028478	RRM_1	PF00076.22	2.9e-86	3	4
ENSCANP00000028478	RRM_1	PF00076.22	2.9e-86	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000051536	PABPC4L-201	1113	-	ENSCANP00000028478	370 (aa)	-	A0A2K5JHY7

Gene Model

Click here to download ENSCANG00000037677's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000037677's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCANG00000037677	PABPC4L	98	59.831	ENSCANG00000011473	PABPC5	96	59.890
ENSCANG00000037677	PABPC4L	53	37.313	ENSCANG00000037178	-	78	37.313
ENSCANG00000037677	PABPC4L	84	40.789	ENSCANG00000014668	-	58	40.789
ENSCANG00000037677	PABPC4L	97	30.000	ENSCANG00000017395	TIAL1	87	32.456
ENSCANG00000037677	PABPC4L	98	73.961	ENSCANG00000034177	PABPC4	61	73.961
ENSCANG00000037677	PABPC4L	65	34.722	ENSCANG00000032689	CELF1	79	34.722
ENSCANG00000037677	PABPC4L	97	41.530	ENSCANG00000035579	SF3B4	61	41.530
ENSCANG00000037677	PABPC4L	98	63.085	ENSCANG00000037530	PABPC1L	62	63.085
ENSCANG00000037677	PABPC4L	98	70.261	ENSCANG00000021524	PABPC1	65	70.261
ENSCANG00000037677	PABPC4L	58	35.135	ENSCANG00000038825	-	81	35.135
ENSCANG00000037677	PABPC4L	95	37.500	ENSCANG00000031033	-	50	37.500
ENSCANG00000037677	PABPC4L	98	66.942	ENSCANG00000041712	PABPC3	60	66.942
ENSCANG00000037677	PABPC4L	93	31.977	ENSCANG00000041843	PUF60	50	31.481
ENSCANG00000037677	PABPC4L	71	31.285	ENSCANG00000028832	-	56	32.051
ENSCANG00000037677	PABPC4L	97	31.707	ENSCANG00000041972	ELAVL1	85	31.707
ENSCANG00000037677	PABPC4L	63	34.831	ENSCANG00000037000	CIRBP	56	34.831
ENSCANG00000037677	PABPC4L	82	42.105	ENSCANG00000037907	-	89	44.000
ENSCANG00000037677	PABPC4L	98	66.000	ENSCANG00000036233	-	98	66.000
ENSCANG00000037677	PABPC4L	71	31.285	ENSCANG00000041992	HNRNPA1	64	31.285

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000037677	PABPC4L	100	97.027	ENSG00000254535	PABPC4L	100	97.027	Homo_sapiens
ENSCANG00000037677	PABPC4L	100	94.595	ENSANAG00000017199	PABPC4L	87	94.595	Aotus_nancymaae
ENSCANG00000037677	PABPC4L	99	86.992	ENSBTAG00000046902	PABPC4L	99	86.992	Bos_taurus
ENSCANG00000037677	PABPC4L	100	94.865	ENSCJAG00000045332	PABPC4L	86	94.865	Callithrix_jacchus
ENSCANG00000037677	PABPC4L	99	72.283	ENSCAFG00020019182	-	54	72.283	Canis_lupus_dingo
ENSCANG00000037677	PABPC4L	99	86.992	ENSCHIG00000007231	PABPC4L	99	86.992	Capra_hircus
ENSCANG00000037677	PABPC4L	98	79.641	ENSCAPG00000000555	PABPC4L	100	79.641	Cavia_aperea
ENSCANG00000037677	PABPC4L	99	77.507	ENSCPOG00000033167	PABPC4L	100	77.507	Cavia_porcellus
ENSCANG00000037677	PABPC4L	100	94.865	ENSCCAG00000031681	PABPC4L	86	94.865	Cebus_capucinus
ENSCANG00000037677	PABPC4L	100	81.892	ENSCLAG00000017628	PABPC4L	100	81.892	Chinchilla_lanigera
ENSCANG00000037677	PABPC4L	100	80.811	ENSCGRG00001002070	Pabpc4l	100	80.811	Cricetulus_griseus_chok1gshd
ENSCANG00000037677	PABPC4L	100	80.811	ENSCGRG00000020086	Pabpc4l	100	80.811	Cricetulus_griseus_crigri
ENSCANG00000037677	PABPC4L	100	89.730	ENSDNOG00000031077	PABPC4L	95	89.730	Dasypus_novemcinctus
ENSCANG00000037677	PABPC4L	99	87.534	ENSEASG00005007883	PABPC4L	99	87.534	Equus_asinus_asinus
ENSCANG00000037677	PABPC4L	99	87.805	ENSECAG00000031416	PABPC4L	99	87.805	Equus_caballus
ENSCANG00000037677	PABPC4L	99	87.534	ENSFCAG00000028270	PABPC4L	99	87.534	Felis_catus
ENSCANG00000037677	PABPC4L	99	82.656	ENSFDAG00000019606	PABPC4L	99	82.656	Fukomys_damarensis
ENSCANG00000037677	PABPC4L	100	97.027	ENSGGOG00000024991	PABPC4L	100	97.027	Gorilla_gorilla
ENSCANG00000037677	PABPC4L	99	82.385	ENSHGLG00000020104	PABPC4L	99	82.385	Heterocephalus_glaber_female
ENSCANG00000037677	PABPC4L	99	82.385	ENSHGLG00100020648	PABPC4L	99	82.385	Heterocephalus_glaber_male
ENSCANG00000037677	PABPC4L	100	84.906	ENSSTOG00000019472	PABPC4L	99	84.906	Ictidomys_tridecemlineatus
ENSCANG00000037677	PABPC4L	99	80.759	ENSJJAG00000004090	Pabpc4l	99	80.759	Jaculus_jaculus
ENSCANG00000037677	PABPC4L	100	81.081	ENSMAUG00000016313	Pabpc4l	100	81.081	Mesocricetus_auratus
ENSCANG00000037677	PABPC4L	100	92.162	ENSMICG00000029683	PABPC4L	100	92.162	Microcebus_murinus
ENSCANG00000037677	PABPC4L	100	82.162	ENSMOCG00000007551	Pabpc4l	100	82.162	Microtus_ochrogaster
ENSCANG00000037677	PABPC4L	99	80.814	MGP_CAROLIEiJ_G0024968	Pabpc4l	100	82.000	Mus_caroli
ENSCANG00000037677	PABPC4L	99	81.395	ENSMUSG00000090919	Pabpc4l	100	82.000	Mus_musculus
ENSCANG00000037677	PABPC4L	99	81.977	MGP_PahariEiJ_G0026409	Pabpc4l	100	81.977	Mus_pahari
ENSCANG00000037677	PABPC4L	99	80.814	MGP_SPRETEiJ_G0025903	Pabpc4l	100	82.000	Mus_spretus
ENSCANG00000037677	PABPC4L	99	78.591	ENSMLUG00000008254	PABPC4L	99	78.591	Myotis_lucifugus
ENSCANG00000037677	PABPC4L	100	85.405	ENSNGAG00000001502	Pabpc4l	100	85.405	Nannospalax_galili
ENSCANG00000037677	PABPC4L	100	97.027	ENSNLEG00000019300	PABPC4L	100	97.027	Nomascus_leucogenys
ENSCANG00000037677	PABPC4L	100	85.135	ENSOGAG00000026166	PABPC4L	100	85.135	Otolemur_garnettii
ENSCANG00000037677	PABPC4L	99	98.142	ENSPPAG00000043745	PABPC4L	93	98.142	Pan_paniscus
ENSCANG00000037677	PABPC4L	99	86.992	ENSPPRG00000018628	PABPC4L	99	86.992	Panthera_pardus
ENSCANG00000037677	PABPC4L	99	87.534	ENSPTIG00000010106	PABPC4L	99	87.534	Panthera_tigris_altaica
ENSCANG00000037677	PABPC4L	99	98.142	ENSPTRG00000045513	-	78	98.142	Pan_troglodytes
ENSCANG00000037677	PABPC4L	100	81.081	ENSPEMG00000012565	Pabpc4l	100	81.081	Peromyscus_maniculatus_bairdii
ENSCANG00000037677	PABPC4L	100	92.703	ENSPCOG00000025578	PABPC4L	100	92.703	Propithecus_coquereli
ENSCANG00000037677	PABPC4L	100	79.730	ENSRNOG00000029749	Pabpc4l	100	79.730	Rattus_norvegicus
ENSCANG00000037677	PABPC4L	100	98.378	ENSRBIG00000030229	PABPC4L	100	98.378	Rhinopithecus_bieti
ENSCANG00000037677	PABPC4L	100	98.108	ENSRROG00000020367	PABPC4L	100	98.108	Rhinopithecus_roxellana
ENSCANG00000037677	PABPC4L	100	92.973	ENSSBOG00000016382	PABPC4L	100	92.973	Saimiri_boliviensis_boliviensis
ENSCANG00000037677	PABPC4L	99	81.843	ENSSSCG00000009067	PABPC4L	99	81.843	Sus_scrofa
ENSCANG00000037677	PABPC4L	99	86.721	ENSUAMG00000001289	PABPC4L	99	86.721	Ursus_americanus
ENSCANG00000037677	PABPC4L	99	86.721	ENSUMAG00000014887	PABPC4L	99	86.721	Ursus_maritimus
ENSCANG00000037677	PABPC4L	87	74.847	ENSVVUG00000011060	-	74	74.847	Vulpes_vulpes