EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCANG00000038032 (Gene tree)
Gene ID: 105509521
Gene Symbol: A1CF
Alias: ACF|ACF64|ACF65|APOBEC1CF|ASP
Full Name: APOBEC1 complementation factor
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Minus strand
Length: 83757 bases
Position: chrKN980240.1:1355722-1439478
Accession: 105509521
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000029065	DND1_DSRM	PF14709.7	1.5e-24	1	1
ENSCANP00000029083	DND1_DSRM	PF14709.7	2.2e-17	1	1
ENSCANP00000029065	RRM_1	PF00076.22	9.6e-40	1	3
ENSCANP00000029065	RRM_1	PF00076.22	9.6e-40	2	3
ENSCANP00000029065	RRM_1	PF00076.22	9.6e-40	3	3
ENSCANP00000029083	RRM_1	PF00076.22	1.1e-39	1	3
ENSCANP00000029083	RRM_1	PF00076.22	1.1e-39	2	3
ENSCANP00000029083	RRM_1	PF00076.22	1.1e-39	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000052183	A1CF-201	2049	XM_011938753	ENSCANP00000029065	592 (aa)	XP_011794143	A0A2K5JJN7
ENSCANT00000052202	A1CF-202	1824	-	ENSCANP00000029083	607 (aa)	-	A0A2K5JJN6

Gene Model

Click here to download ENSCANG00000038032's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000038032's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCANG00000038032	A1CF	53	52.215	ENSCANG00000026442	HNRNPR	50	52.215
ENSCANG00000038032	A1CF	74	58.850	ENSCANG00000019997	RBM47	87	68.588
ENSCANG00000038032	A1CF	86	72.667	ENSCANG00000039065	RBM46	96	72.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000038032	A1CF	100	98.151	ENSG00000148584	A1CF	100	99.502	Homo_sapiens
ENSCANG00000038032	A1CF	100	73.544	ENSAPOG00000008259	a1cf	100	73.544	Acanthochromis_polyacanthus
ENSCANG00000038032	A1CF	100	95.946	ENSAMEG00000000523	A1CF	100	95.946	Ailuropoda_melanoleuca
ENSCANG00000038032	A1CF	100	75.367	ENSACIG00000008632	a1cf	100	76.509	Amphilophus_citrinellus
ENSCANG00000038032	A1CF	100	74.220	ENSAOCG00000023744	a1cf	96	84.638	Amphiprion_ocellaris
ENSCANG00000038032	A1CF	100	75.205	ENSAPEG00000009537	a1cf	100	76.026	Amphiprion_percula
ENSCANG00000038032	A1CF	100	75.733	ENSATEG00000013720	a1cf	100	77.036	Anabas_testudineus
ENSCANG00000038032	A1CF	100	89.376	ENSAPLG00000002964	A1CF	100	89.376	Anas_platyrhynchos
ENSCANG00000038032	A1CF	100	83.642	ENSACAG00000015269	A1CF	100	83.642	Anolis_carolinensis
ENSCANG00000038032	A1CF	100	97.138	ENSANAG00000019974	A1CF	100	97.138	Aotus_nancymaae
ENSCANG00000038032	A1CF	100	73.892	ENSACLG00000017428	a1cf	100	75.369	Astatotilapia_calliptera
ENSCANG00000038032	A1CF	100	74.545	ENSAMXG00000018180	a1cf	100	74.876	Astyanax_mexicanus
ENSCANG00000038032	A1CF	100	94.118	ENSBTAG00000021195	A1CF	100	95.055	Bos_taurus
ENSCANG00000038032	A1CF	100	98.485	ENSCJAG00000005045	A1CF	100	98.485	Callithrix_jacchus
ENSCANG00000038032	A1CF	100	96.115	ENSCAFG00000015581	A1CF	100	96.115	Canis_familiaris
ENSCANG00000038032	A1CF	100	96.115	ENSCAFG00020026421	A1CF	100	96.115	Canis_lupus_dingo
ENSCANG00000038032	A1CF	100	95.126	ENSCHIG00000020411	A1CF	100	95.294	Capra_hircus
ENSCANG00000038032	A1CF	95	96.791	ENSTSYG00000001755	A1CF	100	95.707	Carlito_syrichta
ENSCANG00000038032	A1CF	100	83.436	ENSCAPG00000017386	A1CF	90	95.142	Cavia_aperea
ENSCANG00000038032	A1CF	100	96.633	ENSCPOG00000009807	A1CF	100	96.633	Cavia_porcellus
ENSCANG00000038032	A1CF	100	98.482	ENSCCAG00000018168	A1CF	100	98.482	Cebus_capucinus
ENSCANG00000038032	A1CF	100	97.973	ENSCATG00000043715	A1CF	100	97.973	Cercocebus_atys
ENSCANG00000038032	A1CF	100	96.141	ENSCLAG00000010424	A1CF	100	96.141	Chinchilla_lanigera
ENSCANG00000038032	A1CF	100	99.662	ENSCSAG00000007032	A1CF	100	99.662	Chlorocebus_sabaeus
ENSCANG00000038032	A1CF	98	89.492	ENSCHOG00000009089	A1CF	98	89.492	Choloepus_hoffmanni
ENSCANG00000038032	A1CF	100	89.376	ENSCPBG00000026464	A1CF	100	88.870	Chrysemys_picta_bellii
ENSCANG00000038032	A1CF	100	93.950	ENSCGRG00001017413	A1cf	100	93.950	Cricetulus_griseus_chok1gshd
ENSCANG00000038032	A1CF	100	93.109	ENSCGRG00000017332	A1cf	100	93.782	Cricetulus_griseus_crigri
ENSCANG00000038032	A1CF	100	74.793	ENSCSEG00000002361	a1cf	100	75.914	Cynoglossus_semilaevis
ENSCANG00000038032	A1CF	100	74.593	ENSCVAG00000010520	a1cf	100	76.059	Cyprinodon_variegatus
ENSCANG00000038032	A1CF	100	78.094	ENSDARG00000002968	a1cf	100	79.431	Danio_rerio
ENSCANG00000038032	A1CF	100	94.958	ENSDNOG00000002829	A1CF	100	94.958	Dasypus_novemcinctus
ENSCANG00000038032	A1CF	81	93.116	ENSETEG00000012527	A1CF	81	93.116	Echinops_telfairi
ENSCANG00000038032	A1CF	100	96.650	ENSEASG00005012924	A1CF	100	96.650	Equus_asinus_asinus
ENSCANG00000038032	A1CF	100	96.147	ENSECAG00000010424	A1CF	100	96.147	Equus_caballus
ENSCANG00000038032	A1CF	78	80.472	ENSEEUG00000000013	A1CF	99	78.661	Erinaceus_europaeus
ENSCANG00000038032	A1CF	100	79.097	ENSELUG00000003159	a1cf	100	79.933	Esox_lucius
ENSCANG00000038032	A1CF	100	93.412	ENSFCAG00000011179	A1CF	100	93.412	Felis_catus
ENSCANG00000038032	A1CF	100	86.341	ENSFALG00000013183	A1CF	100	86.341	Ficedula_albicollis
ENSCANG00000038032	A1CF	100	94.286	ENSFDAG00000019371	A1CF	100	93.950	Fukomys_damarensis
ENSCANG00000038032	A1CF	100	69.870	ENSFHEG00000019652	a1cf	96	82.031	Fundulus_heteroclitus
ENSCANG00000038032	A1CF	100	71.570	ENSGMOG00000018943	a1cf	100	71.736	Gadus_morhua
ENSCANG00000038032	A1CF	95	88.790	ENSGALG00000003765	A1CF	97	88.790	Gallus_gallus
ENSCANG00000038032	A1CF	100	70.066	ENSGAFG00000014868	a1cf	100	71.053	Gambusia_affinis
ENSCANG00000038032	A1CF	100	73.849	ENSGACG00000010241	a1cf	100	74.507	Gasterosteus_aculeatus
ENSCANG00000038032	A1CF	94	89.286	ENSGAGG00000016508	A1CF	97	88.750	Gopherus_agassizii
ENSCANG00000038032	A1CF	100	97.983	ENSGGOG00000009670	A1CF	100	97.983	Gorilla_gorilla
ENSCANG00000038032	A1CF	100	74.878	ENSHBUG00000021959	a1cf	100	76.183	Haplochromis_burtoni
ENSCANG00000038032	A1CF	100	96.303	ENSHGLG00000008955	A1CF	100	96.303	Heterocephalus_glaber_female
ENSCANG00000038032	A1CF	100	95.630	ENSHGLG00100000518	A1CF	100	95.294	Heterocephalus_glaber_male
ENSCANG00000038032	A1CF	100	70.098	ENSHCOG00000017669	a1cf	100	72.757	Hippocampus_comes
ENSCANG00000038032	A1CF	90	83.022	ENSIPUG00000010367	a1cf	96	83.022	Ictalurus_punctatus
ENSCANG00000038032	A1CF	100	76.585	ENSKMAG00000006568	a1cf	100	77.398	Kryptolebias_marmoratus
ENSCANG00000038032	A1CF	99	75.286	ENSLBEG00000020994	a1cf	98	77.100	Labrus_bergylta
ENSCANG00000038032	A1CF	100	81.376	ENSLACG00000008061	A1CF	100	81.376	Latimeria_chalumnae
ENSCANG00000038032	A1CF	100	82.915	ENSLOCG00000006302	a1cf	100	82.915	Lepisosteus_oculatus
ENSCANG00000038032	A1CF	100	94.622	ENSLAFG00000015462	A1CF	100	94.622	Loxodonta_africana
ENSCANG00000038032	A1CF	100	98.311	ENSMFAG00000035948	A1CF	100	98.311	Macaca_fascicularis
ENSCANG00000038032	A1CF	100	98.311	ENSMMUG00000007077	A1CF	100	98.311	Macaca_mulatta
ENSCANG00000038032	A1CF	100	97.973	ENSMNEG00000031454	A1CF	100	97.973	Macaca_nemestrina
ENSCANG00000038032	A1CF	100	99.324	ENSMLEG00000037223	A1CF	100	99.324	Mandrillus_leucophaeus
ENSCANG00000038032	A1CF	100	73.486	ENSMAMG00000010402	a1cf	100	75.490	Mastacembelus_armatus
ENSCANG00000038032	A1CF	100	76.047	ENSMZEG00005013245	a1cf	100	77.052	Maylandia_zebra
ENSCANG00000038032	A1CF	100	88.889	ENSMGAG00000001507	A1CF	100	88.889	Meleagris_gallopavo
ENSCANG00000038032	A1CF	100	93.109	ENSMAUG00000007422	A1cf	100	93.613	Mesocricetus_auratus
ENSCANG00000038032	A1CF	100	93.478	ENSMICG00000003377	A1CF	100	93.980	Microcebus_murinus
ENSCANG00000038032	A1CF	100	93.277	ENSMOCG00000021536	A1cf	100	93.445	Microtus_ochrogaster
ENSCANG00000038032	A1CF	100	67.488	ENSMMOG00000009422	a1cf	100	69.408	Mola_mola
ENSCANG00000038032	A1CF	92	90.092	ENSMODG00000016478	A1CF	99	90.092	Monodelphis_domestica
ENSCANG00000038032	A1CF	100	72.027	ENSMALG00000012992	a1cf	100	72.027	Monopterus_albus
ENSCANG00000038032	A1CF	100	93.277	MGP_CAROLIEiJ_G0022873	A1cf	100	93.782	Mus_caroli
ENSCANG00000038032	A1CF	100	93.277	ENSMUSG00000052595	A1cf	99	95.789	Mus_musculus
ENSCANG00000038032	A1CF	100	93.109	MGP_PahariEiJ_G0014366	A1cf	100	93.109	Mus_pahari
ENSCANG00000038032	A1CF	100	92.773	MGP_SPRETEiJ_G0023792	A1cf	100	93.277	Mus_spretus
ENSCANG00000038032	A1CF	100	90.541	ENSMPUG00000016971	A1CF	100	90.541	Mustela_putorius_furo
ENSCANG00000038032	A1CF	100	94.118	ENSMLUG00000016071	A1CF	100	94.118	Myotis_lucifugus
ENSCANG00000038032	A1CF	100	94.622	ENSNGAG00000015136	A1cf	100	94.622	Nannospalax_galili
ENSCANG00000038032	A1CF	100	75.204	ENSNBRG00000001712	a1cf	100	76.509	Neolamprologus_brichardi
ENSCANG00000038032	A1CF	100	98.824	ENSNLEG00000012028	A1CF	100	98.824	Nomascus_leucogenys
ENSCANG00000038032	A1CF	94	90.536	ENSMEUG00000015909	A1CF	100	90.357	Notamacropus_eugenii
ENSCANG00000038032	A1CF	89	85.143	ENSOPRG00000010667	A1CF	97	85.283	Ochotona_princeps
ENSCANG00000038032	A1CF	100	74.551	ENSONIG00000019105	a1cf	100	76.183	Oreochromis_niloticus
ENSCANG00000038032	A1CF	78	88.865	ENSOANG00000007360	A1CF	99	88.865	Ornithorhynchus_anatinus
ENSCANG00000038032	A1CF	100	92.785	ENSOCUG00000011587	A1CF	100	93.456	Oryctolagus_cuniculus
ENSCANG00000038032	A1CF	100	73.821	ENSORLG00000013342	a1cf	100	73.821	Oryzias_latipes
ENSCANG00000038032	A1CF	100	75.286	ENSORLG00020000586	a1cf	100	75.654	Oryzias_latipes_hni
ENSCANG00000038032	A1CF	100	75.450	ENSORLG00015018569	a1cf	100	75.817	Oryzias_latipes_hsok
ENSCANG00000038032	A1CF	100	74.632	ENSOMEG00000013531	a1cf	100	74.632	Oryzias_melastigma
ENSCANG00000038032	A1CF	100	96.115	ENSOGAG00000012884	A1CF	100	96.115	Otolemur_garnettii
ENSCANG00000038032	A1CF	100	94.958	ENSOARG00000013695	A1CF	100	95.126	Ovis_aries
ENSCANG00000038032	A1CF	100	93.148	ENSPPAG00000028115	A1CF	100	98.785	Pan_paniscus
ENSCANG00000038032	A1CF	100	95.101	ENSPPRG00000012180	A1CF	100	95.101	Panthera_pardus
ENSCANG00000038032	A1CF	100	95.101	ENSPTIG00000021223	A1CF	100	95.101	Panthera_tigris_altaica
ENSCANG00000038032	A1CF	100	97.815	ENSPTRG00000002508	A1CF	100	97.815	Pan_troglodytes
ENSCANG00000038032	A1CF	100	98.311	ENSPANG00000021988	A1CF	100	98.311	Papio_anubis
ENSCANG00000038032	A1CF	100	80.769	ENSPKIG00000025176	a1cf	100	80.602	Paramormyrops_kingsleyae
ENSCANG00000038032	A1CF	100	87.690	ENSPSIG00000010318	A1CF	100	87.521	Pelodiscus_sinensis
ENSCANG00000038032	A1CF	89	71.048	ENSPMGG00000013359	a1cf	99	67.410	Periophthalmus_magnuspinnatus
ENSCANG00000038032	A1CF	100	94.958	ENSPEMG00000015021	A1cf	100	94.790	Peromyscus_maniculatus_bairdii
ENSCANG00000038032	A1CF	100	90.051	ENSPCIG00000002175	A1CF	100	89.882	Phascolarctos_cinereus
ENSCANG00000038032	A1CF	100	76.059	ENSPFOG00000006683	a1cf	100	77.524	Poecilia_formosa
ENSCANG00000038032	A1CF	100	75.896	ENSPFOG00000007437	-	100	77.362	Poecilia_formosa
ENSCANG00000038032	A1CF	100	74.756	ENSPLAG00000001210	-	100	76.221	Poecilia_latipinna
ENSCANG00000038032	A1CF	100	74.756	ENSPLAG00000000026	a1cf	100	76.221	Poecilia_latipinna
ENSCANG00000038032	A1CF	100	67.320	ENSPMEG00000000921	a1cf	100	68.791	Poecilia_mexicana
ENSCANG00000038032	A1CF	100	68.464	ENSPMEG00000015529	-	100	69.935	Poecilia_mexicana
ENSCANG00000038032	A1CF	100	75.733	ENSPREG00000016298	a1cf	100	77.199	Poecilia_reticulata
ENSCANG00000038032	A1CF	100	97.311	ENSPPYG00000002819	A1CF	100	97.311	Pongo_abelii
ENSCANG00000038032	A1CF	79	73.941	ENSPCAG00000006463	A1CF	70	89.796	Procavia_capensis
ENSCANG00000038032	A1CF	100	96.644	ENSPCOG00000024172	A1CF	100	96.644	Propithecus_coquereli
ENSCANG00000038032	A1CF	100	76.183	ENSPNYG00000017944	a1cf	100	77.488	Pundamilia_nyererei
ENSCANG00000038032	A1CF	100	79.636	ENSPNAG00000007704	a1cf	100	79.636	Pygocentrus_nattereri
ENSCANG00000038032	A1CF	100	91.933	ENSRNOG00000033195	A1cf	100	92.437	Rattus_norvegicus
ENSCANG00000038032	A1CF	100	92.929	ENSRBIG00000042892	A1CF	100	96.850	Rhinopithecus_bieti
ENSCANG00000038032	A1CF	100	99.662	ENSRROG00000041398	A1CF	100	99.662	Rhinopithecus_roxellana
ENSCANG00000038032	A1CF	100	98.151	ENSSBOG00000021930	A1CF	100	98.151	Saimiri_boliviensis_boliviensis
ENSCANG00000038032	A1CF	100	90.219	ENSSHAG00000005096	A1CF	100	90.219	Sarcophilus_harrisii
ENSCANG00000038032	A1CF	100	78.773	ENSSFOG00015011774	a1cf	100	78.773	Scleropages_formosus
ENSCANG00000038032	A1CF	100	75.244	ENSSMAG00000013271	a1cf	100	75.570	Scophthalmus_maximus
ENSCANG00000038032	A1CF	100	76.451	ENSSDUG00000013930	a1cf	100	77.280	Seriola_dumerili
ENSCANG00000038032	A1CF	100	69.472	ENSSLDG00000004290	a1cf	100	70.462	Seriola_lalandi_dorsalis
ENSCANG00000038032	A1CF	95	83.569	ENSSARG00000005940	A1CF	96	83.922	Sorex_araneus
ENSCANG00000038032	A1CF	95	88.516	ENSSPUG00000006797	A1CF	95	87.633	Sphenodon_punctatus
ENSCANG00000038032	A1CF	100	95.630	ENSSSCG00000010431	A1CF	100	95.630	Sus_scrofa
ENSCANG00000038032	A1CF	100	87.458	ENSTGUG00000005090	A1CF	100	87.458	Taeniopygia_guttata
ENSCANG00000038032	A1CF	100	74.388	ENSTRUG00000001982	a1cf	100	74.388	Takifugu_rubripes
ENSCANG00000038032	A1CF	100	75.122	ENSTNIG00000003580	a1cf	100	74.797	Tetraodon_nigroviridis
ENSCANG00000038032	A1CF	100	84.013	ENSTTRG00000013190	A1CF	100	84.176	Tursiops_truncatus
ENSCANG00000038032	A1CF	100	94.595	ENSUAMG00000020065	A1CF	100	94.595	Ursus_americanus
ENSCANG00000038032	A1CF	100	95.439	ENSUMAG00000011162	A1CF	100	95.439	Ursus_maritimus
ENSCANG00000038032	A1CF	87	89.827	ENSVPAG00000006130	A1CF	86	89.827	Vicugna_pacos
ENSCANG00000038032	A1CF	100	94.088	ENSVVUG00000002504	A1CF	100	94.257	Vulpes_vulpes
ENSCANG00000038032	A1CF	100	78.727	ENSXETG00000006611	a1cf	100	78.559	Xenopus_tropicalis
ENSCANG00000038032	A1CF	100	76.066	ENSXCOG00000003302	a1cf	100	77.049	Xiphophorus_couchianus
ENSCANG00000038032	A1CF	100	77.213	ENSXMAG00000016703	a1cf	100	78.197	Xiphophorus_maculatus