EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCANG00000038126 (Gene tree)
Gene ID: 105523264
Gene Symbol: -
Alias: DKFZp547I1315|DKFZp686E01200|DKFZp781D1727|FLJ38614
Full Name: chromodomain helicase DNA binding protein 2
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Minus strand
Length: 146771 bases
Position: chrKN979519.1:8952120-9098890
Accession: 105523264
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000029748	ResIII	PF04851.15	3.6e-08	1	1
ENSCANP00000029721	ResIII	PF04851.15	3.7e-08	1	1
ENSCANP00000029742	ResIII	PF04851.15	3.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000052942	-	1278	XM_011958059	ENSCANP00000029759	425 (aa)	XP_011813449	A0A2K5JLP1
ENSCANT00000052899	-	12096	XM_011958054	ENSCANP00000029721	1828 (aa)	XP_011813444	A0A2K5JLK8
ENSCANT00000052929	-	5445	-	ENSCANP00000029748	1814 (aa)	-	A0A2K5JLM0
ENSCANT00000052944	-	96	-	ENSCANP00000029761	32 (aa)	-	A0A2K5JLP6
ENSCANT00000052921	-	5496	-	ENSCANP00000029742	1831 (aa)	-	A0A2K5JLP8

Gene Model

Click here to download ENSCANG00000038126's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000038126's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCANG00000038126	-	91	58.448	ENSCANG00000036916	CHD1	99	54.098
ENSCANG00000038126	-	57	33.426	ENSCANG00000043435	CHD6	85	40.164
ENSCANG00000038126	-	52	36.997	ENSCANG00000035317	-	52	37.188

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000038126	-	100	99.726	ENSG00000173575	CHD2	100	99.726	Homo_sapiens
ENSCANG00000038126	-	96	72.692	ENSAPOG00000008913	chd2	100	71.820	Acanthochromis_polyacanthus
ENSCANG00000038126	-	63	98.958	ENSAMEG00000010805	-	100	98.958	Ailuropoda_melanoleuca
ENSCANG00000038126	-	96	70.140	ENSAOCG00000016332	chd2	100	69.301	Amphiprion_ocellaris
ENSCANG00000038126	-	98	70.627	ENSAPEG00000016676	chd2	100	71.677	Amphiprion_percula
ENSCANG00000038126	-	99	70.440	ENSATEG00000005246	chd2	100	71.460	Anabas_testudineus
ENSCANG00000038126	-	100	87.941	ENSAPLG00000011141	-	100	87.996	Anas_platyrhynchos
ENSCANG00000038126	-	98	81.068	ENSACAG00000000088	-	99	80.738	Anolis_carolinensis
ENSCANG00000038126	-	100	99.234	ENSANAG00000024017	-	100	99.234	Aotus_nancymaae
ENSCANG00000038126	-	100	99.234	ENSCJAG00000020444	-	100	99.234	Callithrix_jacchus
ENSCANG00000038126	-	99	98.507	ENSCAFG00000010998	CHD2	100	98.550	Canis_familiaris
ENSCANG00000038126	-	99	95.277	ENSCHIG00000022261	-	99	95.277	Capra_hircus
ENSCANG00000038126	-	100	98.687	ENSTSYG00000003272	-	100	98.687	Carlito_syrichta
ENSCANG00000038126	-	93	97.192	ENSCPOG00000005800	-	100	97.192	Cavia_porcellus
ENSCANG00000038126	-	100	99.234	ENSCCAG00000035304	-	100	99.234	Cebus_capucinus
ENSCANG00000038126	-	100	99.836	ENSCATG00000031069	-	100	99.836	Cercocebus_atys
ENSCANG00000038126	-	100	97.484	ENSCLAG00000016269	-	100	97.484	Chinchilla_lanigera
ENSCANG00000038126	-	100	99.891	ENSCSAG00000017007	-	100	99.891	Chlorocebus_sabaeus
ENSCANG00000038126	-	78	99.091	ENSCHOG00000000608	-	82	99.091	Choloepus_hoffmanni
ENSCANG00000038126	-	81	87.768	ENSCPBG00000018049	-	97	90.385	Chrysemys_picta_bellii
ENSCANG00000038126	-	74	54.414	ENSCSAVG00000007580	-	93	60.314	Ciona_savignyi
ENSCANG00000038126	-	100	97.319	ENSCGRG00001006649	Chd2	100	97.319	Cricetulus_griseus_chok1gshd
ENSCANG00000038126	-	100	97.319	ENSCGRG00000018154	Chd2	100	97.319	Cricetulus_griseus_crigri
ENSCANG00000038126	-	93	66.523	ENSCSEG00000003646	chd2	94	66.038	Cynoglossus_semilaevis
ENSCANG00000038126	-	100	64.213	ENSCVAG00000002427	chd2	99	71.000	Cyprinodon_variegatus
ENSCANG00000038126	-	96	70.146	ENSDARG00000060687	chd2	100	71.412	Danio_rerio
ENSCANG00000038126	-	99	97.702	ENSDNOG00000009796	-	100	97.702	Dasypus_novemcinctus
ENSCANG00000038126	-	50	75.000	ENSEBUG00000014994	chd2	83	75.824	Eptatretus_burgeri
ENSCANG00000038126	-	99	98.617	ENSEASG00005015526	-	99	100.000	Equus_asinus_asinus
ENSCANG00000038126	-	95	72.075	ENSELUG00000017981	chd2	100	70.708	Esox_lucius
ENSCANG00000038126	-	100	89.179	ENSFALG00000010369	-	100	89.070	Ficedula_albicollis
ENSCANG00000038126	-	100	97.429	ENSFDAG00000020651	-	100	97.429	Fukomys_damarensis
ENSCANG00000038126	-	88	71.446	ENSFHEG00000002119	chd2	91	71.262	Fundulus_heteroclitus
ENSCANG00000038126	-	94	69.169	ENSGMOG00000002890	chd2	99	70.571	Gadus_morhua
ENSCANG00000038126	-	100	88.443	ENSGALG00000006949	CHD2	100	88.443	Gallus_gallus
ENSCANG00000038126	-	96	70.333	ENSGAFG00000001905	chd2	97	69.791	Gambusia_affinis
ENSCANG00000038126	-	91	70.933	ENSGACG00000013246	chd2	99	70.383	Gasterosteus_aculeatus
ENSCANG00000038126	-	82	89.945	ENSGAGG00000013176	-	98	91.995	Gopherus_agassizii
ENSCANG00000038126	-	100	98.195	ENSGGOG00000015677	CHD2	100	98.195	Gorilla_gorilla
ENSCANG00000038126	-	96	72.783	ENSHBUG00000017947	chd2	100	71.544	Haplochromis_burtoni
ENSCANG00000038126	-	100	97.046	ENSHGLG00000004435	CHD2	100	97.046	Heterocephalus_glaber_female
ENSCANG00000038126	-	100	96.389	ENSHGLG00100016376	-	100	96.389	Heterocephalus_glaber_male
ENSCANG00000038126	-	88	70.815	ENSHCOG00000008855	chd2	95	70.570	Hippocampus_comes
ENSCANG00000038126	-	72	74.471	ENSIPUG00000000488	chd2	100	68.187	Ictalurus_punctatus
ENSCANG00000038126	-	100	98.523	ENSSTOG00000001270	-	100	98.523	Ictidomys_tridecemlineatus
ENSCANG00000038126	-	100	97.319	ENSJJAG00000000213	Chd2	100	97.319	Jaculus_jaculus
ENSCANG00000038126	-	84	72.463	ENSKMAG00000015849	chd2	99	73.045	Kryptolebias_marmoratus
ENSCANG00000038126	-	76	96.659	ENSLAFG00000016885	-	100	97.534	Loxodonta_africana
ENSCANG00000038126	-	100	99.836	ENSMFAG00000033343	-	100	99.836	Macaca_fascicularis
ENSCANG00000038126	-	100	99.836	ENSMMUG00000011782	-	100	99.836	Macaca_mulatta
ENSCANG00000038126	-	100	99.454	ENSMNEG00000036875	-	100	99.454	Macaca_nemestrina
ENSCANG00000038126	-	100	99.891	ENSMLEG00000035026	-	100	99.891	Mandrillus_leucophaeus
ENSCANG00000038126	-	96	71.971	ENSMAMG00000009082	chd2	100	70.692	Mastacembelus_armatus
ENSCANG00000038126	-	99	88.316	ENSMGAG00000008966	-	99	88.264	Meleagris_gallopavo
ENSCANG00000038126	-	100	96.937	ENSMICG00000000332	-	100	96.937	Microcebus_murinus
ENSCANG00000038126	-	100	96.993	ENSMOCG00000015124	Chd2	100	96.993	Microtus_ochrogaster
ENSCANG00000038126	-	100	92.329	ENSMODG00000013158	-	100	92.492	Monodelphis_domestica
ENSCANG00000038126	-	100	96.608	MGP_CAROLIEiJ_G0029860	Chd2	100	96.608	Mus_caroli
ENSCANG00000038126	-	100	96.335	ENSMUSG00000078671	Chd2	100	96.335	Mus_musculus
ENSCANG00000038126	-	100	96.610	MGP_PahariEiJ_G0013082	Chd2	100	96.610	Mus_pahari
ENSCANG00000038126	-	100	96.444	MGP_SPRETEiJ_G0030962	Chd2	100	96.444	Mus_spretus
ENSCANG00000038126	-	100	98.414	ENSMPUG00000017577	-	100	98.414	Mustela_putorius_furo
ENSCANG00000038126	-	100	95.168	ENSMLUG00000009292	-	100	95.168	Myotis_lucifugus
ENSCANG00000038126	-	100	98.085	ENSNGAG00000010792	Chd2	100	98.085	Nannospalax_galili
ENSCANG00000038126	-	96	71.975	ENSNBRG00000020591	chd2	90	74.739	Neolamprologus_brichardi
ENSCANG00000038126	-	100	96.991	ENSNLEG00000012349	-	100	96.991	Nomascus_leucogenys
ENSCANG00000038126	-	71	88.568	ENSMEUG00000001522	-	76	89.764	Notamacropus_eugenii
ENSCANG00000038126	-	100	96.389	ENSODEG00000016028	-	100	96.389	Octodon_degus
ENSCANG00000038126	-	96	72.671	ENSONIG00000015136	chd2	100	71.974	Oreochromis_niloticus
ENSCANG00000038126	-	88	83.158	ENSOANG00000004385	-	99	88.937	Ornithorhynchus_anatinus
ENSCANG00000038126	-	100	86.470	ENSOCUG00000001628	-	99	97.573	Oryctolagus_cuniculus
ENSCANG00000038126	-	96	71.854	ENSORLG00000008403	chd2	100	70.429	Oryzias_latipes
ENSCANG00000038126	-	96	72.103	ENSORLG00020004138	chd2	100	70.645	Oryzias_latipes_hni
ENSCANG00000038126	-	100	64.374	ENSOMEG00000005831	chd2	100	64.763	Oryzias_melastigma
ENSCANG00000038126	-	100	96.389	ENSOGAG00000010399	-	100	96.389	Otolemur_garnettii
ENSCANG00000038126	-	99	97.020	ENSOARG00000010343	-	100	95.624	Ovis_aries
ENSCANG00000038126	-	100	98.689	ENSPPAG00000030381	-	100	98.689	Pan_paniscus
ENSCANG00000038126	-	100	99.781	ENSPTRG00000007478	CHD2	100	99.781	Pan_troglodytes
ENSCANG00000038126	-	100	96.937	ENSPANG00000033355	-	100	96.937	Papio_anubis
ENSCANG00000038126	-	99	69.704	ENSPKIG00000000495	chd2	100	71.267	Paramormyrops_kingsleyae
ENSCANG00000038126	-	84	70.038	ENSPMGG00000009941	chd2	99	70.596	Periophthalmus_magnuspinnatus
ENSCANG00000038126	-	100	97.265	ENSPEMG00000019507	Chd2	100	97.265	Peromyscus_maniculatus_bairdii
ENSCANG00000038126	-	91	93.058	ENSPCIG00000009417	-	100	92.082	Phascolarctos_cinereus
ENSCANG00000038126	-	96	72.804	ENSPFOG00000007050	chd2	100	71.974	Poecilia_formosa
ENSCANG00000038126	-	96	73.002	ENSPLAG00000005067	chd2	100	72.273	Poecilia_latipinna
ENSCANG00000038126	-	96	72.748	ENSPMEG00000019628	chd2	100	71.920	Poecilia_mexicana
ENSCANG00000038126	-	100	98.468	ENSPPYG00000006799	-	100	98.468	Pongo_abelii
ENSCANG00000038126	-	100	98.632	ENSPCOG00000028084	-	100	98.632	Propithecus_coquereli
ENSCANG00000038126	-	69	74.320	ENSPNAG00000016719	chd2	99	69.409	Pygocentrus_nattereri
ENSCANG00000038126	-	100	96.554	ENSRNOG00000012716	Chd2	100	96.554	Rattus_norvegicus
ENSCANG00000038126	-	100	97.704	ENSRBIG00000036875	-	100	97.704	Rhinopithecus_bieti
ENSCANG00000038126	-	100	99.781	ENSRROG00000041087	-	100	99.781	Rhinopithecus_roxellana
ENSCANG00000038126	-	100	99.398	ENSSBOG00000023754	-	100	99.398	Saimiri_boliviensis_boliviensis
ENSCANG00000038126	-	100	92.437	ENSSHAG00000012513	-	100	92.655	Sarcophilus_harrisii
ENSCANG00000038126	-	100	73.168	ENSSFOG00015023759	chd2	100	72.953	Scleropages_formosus
ENSCANG00000038126	-	96	71.076	ENSSMAG00000001726	chd2	100	70.043	Scophthalmus_maximus
ENSCANG00000038126	-	96	70.951	ENSSLDG00000001146	chd2	100	70.293	Seriola_lalandi_dorsalis
ENSCANG00000038126	-	77	98.333	ENSSARG00000014112	-	82	98.333	Sorex_araneus
ENSCANG00000038126	-	99	83.811	ENSSPUG00000011266	-	99	84.228	Sphenodon_punctatus
ENSCANG00000038126	-	100	98.632	ENSSSCG00000002266	-	100	98.632	Sus_scrofa
ENSCANG00000038126	-	100	89.040	ENSTGUG00000008540	-	100	88.986	Taeniopygia_guttata
ENSCANG00000038126	-	84	68.754	ENSTRUG00000008842	chd2	91	68.047	Takifugu_rubripes
ENSCANG00000038126	-	87	73.229	ENSTNIG00000010760	chd2	98	72.876	Tetraodon_nigroviridis
ENSCANG00000038126	-	71	97.357	ENSTBEG00000017730	-	83	97.357	Tupaia_belangeri
ENSCANG00000038126	-	95	98.182	ENSTTRG00000000430	-	95	98.182	Tursiops_truncatus
ENSCANG00000038126	-	100	95.733	ENSUMAG00000000083	-	100	95.241	Ursus_maritimus
ENSCANG00000038126	-	86	97.818	ENSVPAG00000009645	-	90	97.818	Vicugna_pacos
ENSCANG00000038126	-	86	81.036	ENSXETG00000024129	chd2	92	81.036	Xenopus_tropicalis
ENSCANG00000038126	-	96	69.622	ENSXCOG00000020255	chd2	100	68.459	Xiphophorus_couchianus
ENSCANG00000038126	-	96	72.890	ENSXMAG00000002707	chd2	100	71.989	Xiphophorus_maculatus