EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCANG00000038242 (Gene tree)
Gene ID: 105524159
Gene Symbol: -
Alias: -
Full Name: survival motor neuron protein
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Plus strand
Length: 30530 bases
Position: chrKN983625.1:8620375-8650904
Accession: 105524159
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000029487	SMN	PF06003.12	9.3e-107	1	1
ENSCANP00000029481	SMN	PF06003.12	8.6e-103	1	1
ENSCANP00000029437	SMN	PF06003.12	3.6e-102	1	1
ENSCANP00000029492	SMN	PF06003.12	4e-93	1	2
ENSCANP00000029492	SMN	PF06003.12	4e-93	2	2
ENSCANP00000029495	SMN	PF06003.12	2e-59	1	2
ENSCANP00000029495	SMN	PF06003.12	2e-59	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000052655	-	789	XM_011959309	ENSCANP00000029492	262 (aa)	XP_011814699	A0A2K5JKZ9
ENSCANT00000052658	-	678	-	ENSCANP00000029495	225 (aa)	-	A0A2K5JKV9
ENSCANT00000052594	-	1087	XM_011959305	ENSCANP00000029437	276 (aa)	XP_011814695	A0A2K5JKT2
ENSCANT00000052650	-	879	XM_011959306	ENSCANP00000029487	292 (aa)	XP_011814696	A0A2K5JKZ1
ENSCANT00000052642	-	843	XM_011959307	ENSCANP00000029481	280 (aa)	XP_011814697	A0A2K5JKX7

Gene Model

Click here to download ENSCANG00000038242's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000038242's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCANG00000038242	-	100	91.039	ENSCANG00000033324	-	100	85.878

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000038242	-	100	96.947	ENSG00000205571	SMN2	100	96.947	Homo_sapiens
ENSCANG00000038242	-	100	96.947	ENSG00000172062	SMN1	100	96.947	Homo_sapiens
ENSCANG00000038242	-	93	52.809	ENSAPOG00000011324	smn1	94	53.261	Acanthochromis_polyacanthus
ENSCANG00000038242	-	96	89.098	ENSAMEG00000003316	-	93	89.247	Ailuropoda_melanoleuca
ENSCANG00000038242	-	93	52.075	ENSACIG00000019772	-	97	51.154	Amphilophus_citrinellus
ENSCANG00000038242	-	93	52.434	ENSAOCG00000024444	smn1	94	53.261	Amphiprion_ocellaris
ENSCANG00000038242	-	93	53.184	ENSAPEG00000016504	smn1	94	53.623	Amphiprion_percula
ENSCANG00000038242	-	93	54.647	ENSATEG00000002182	smn1	79	55.303	Anabas_testudineus
ENSCANG00000038242	-	68	57.672	ENSAPLG00000010912	-	97	55.051	Anas_platyrhynchos
ENSCANG00000038242	-	81	81.633	ENSACAG00000010017	-	95	57.706	Anolis_carolinensis
ENSCANG00000038242	-	100	90.878	ENSANAG00000032133	-	100	90.878	Aotus_nancymaae
ENSCANG00000038242	-	93	54.851	ENSACLG00000007308	smn1	88	54.651	Astatotilapia_calliptera
ENSCANG00000038242	-	54	57.746	ENSAMXG00000013884	smn1	97	49.818	Astyanax_mexicanus
ENSCANG00000038242	-	95	84.906	ENSBTAG00000005743	SMN2	97	83.929	Bos_taurus
ENSCANG00000038242	-	85	33.188	WBGene00004887	smn-1	94	32.432	Caenorhabditis_elegans
ENSCANG00000038242	-	100	96.703	ENSCJAG00000016290	-	100	96.703	Callithrix_jacchus
ENSCANG00000038242	-	95	88.809	ENSCAFG00000007812	SMN	97	88.172	Canis_familiaris
ENSCANG00000038242	-	95	88.809	ENSCAFG00020019229	-	90	88.172	Canis_lupus_dingo
ENSCANG00000038242	-	95	85.019	ENSCHIG00000015559	-	95	83.688	Capra_hircus
ENSCANG00000038242	-	100	89.130	ENSTSYG00000012058	-	96	95.000	Carlito_syrichta
ENSCANG00000038242	-	78	71.429	ENSCAPG00000011021	-	100	68.722	Cavia_aperea
ENSCANG00000038242	-	100	81.979	ENSCPOG00000012328	-	96	82.807	Cavia_porcellus
ENSCANG00000038242	-	100	82.734	ENSCPOG00000036973	-	99	82.818	Cavia_porcellus
ENSCANG00000038242	-	100	95.604	ENSCCAG00000018127	-	100	95.604	Cebus_capucinus
ENSCANG00000038242	-	100	97.802	ENSCATG00000037002	-	100	97.802	Cercocebus_atys
ENSCANG00000038242	-	100	80.496	ENSCLAG00000000284	-	99	81.132	Chinchilla_lanigera
ENSCANG00000038242	-	100	98.299	ENSCSAG00000015688	-	100	98.299	Chlorocebus_sabaeus
ENSCANG00000038242	-	81	85.938	ENSCHOG00000007346	-	100	73.413	Choloepus_hoffmanni
ENSCANG00000038242	-	99	63.177	ENSCPBG00000010968	-	99	63.060	Chrysemys_picta_bellii
ENSCANG00000038242	-	99	85.714	ENSCGRG00001017959	-	97	83.571	Cricetulus_griseus_chok1gshd
ENSCANG00000038242	-	100	64.130	ENSCGRG00001016998	-	96	65.233	Cricetulus_griseus_chok1gshd
ENSCANG00000038242	-	99	85.714	ENSCGRG00000007698	Smn1	97	83.571	Cricetulus_griseus_crigri
ENSCANG00000038242	-	82	64.286	ENSCSEG00000015227	smn1	97	50.534	Cynoglossus_semilaevis
ENSCANG00000038242	-	94	51.079	ENSCVAG00000007498	smn1	94	52.045	Cyprinodon_variegatus
ENSCANG00000038242	-	94	54.444	ENSDARG00000018494	smn1	96	53.147	Danio_rerio
ENSCANG00000038242	-	82	84.937	ENSDNOG00000007283	-	99	84.937	Dasypus_novemcinctus
ENSCANG00000038242	-	80	73.423	ENSDNOG00000045949	-	86	73.892	Dasypus_novemcinctus
ENSCANG00000038242	-	99	84.892	ENSDORG00000007082	Smn1	99	80.623	Dipodomys_ordii
ENSCANG00000038242	-	80	70.000	ENSETEG00000001406	-	89	70.109	Echinops_telfairi
ENSCANG00000038242	-	95	40.411	ENSEBUG00000011902	smn1	92	40.000	Eptatretus_burgeri
ENSCANG00000038242	-	97	80.812	ENSEASG00005018000	-	89	84.921	Equus_asinus_asinus
ENSCANG00000038242	-	95	88.889	ENSECAG00000015215	-	96	89.247	Equus_caballus
ENSCANG00000038242	-	90	82.000	ENSEEUG00000015777	-	100	82.000	Erinaceus_europaeus
ENSCANG00000038242	-	93	56.343	ENSELUG00000018067	smn1	94	52.985	Esox_lucius
ENSCANG00000038242	-	100	88.129	ENSFCAG00000028292	SMN	97	89.643	Felis_catus
ENSCANG00000038242	-	91	62.055	ENSFALG00000012320	-	91	60.305	Ficedula_albicollis
ENSCANG00000038242	-	100	79.433	ENSFDAG00000017683	-	99	81.017	Fukomys_damarensis
ENSCANG00000038242	-	68	57.303	ENSFHEG00000018508	smn1	96	51.648	Fundulus_heteroclitus
ENSCANG00000038242	-	97	49.442	ENSGMOG00000017279	smn1	93	48.519	Gadus_morhua
ENSCANG00000038242	-	93	60.920	ENSGALG00000002430	SMN	95	58.519	Gallus_gallus
ENSCANG00000038242	-	93	53.409	ENSGAFG00000009501	smn1	93	56.017	Gambusia_affinis
ENSCANG00000038242	-	93	55.426	ENSGACG00000010584	smn1	91	53.462	Gasterosteus_aculeatus
ENSCANG00000038242	-	91	38.571	ENSGAGG00000013639	-	90	38.095	Gopherus_agassizii
ENSCANG00000038242	-	98	63.370	ENSGAGG00000011374	-	97	62.366	Gopherus_agassizii
ENSCANG00000038242	-	97	96.703	ENSGGOG00000003872	-	100	96.748	Gorilla_gorilla
ENSCANG00000038242	-	100	83.206	ENSGGOG00000026704	-	95	94.884	Gorilla_gorilla
ENSCANG00000038242	-	93	53.640	ENSHBUG00000013987	smn1	94	55.556	Haplochromis_burtoni
ENSCANG00000038242	-	100	79.433	ENSHGLG00000001018	-	96	81.338	Heterocephalus_glaber_female
ENSCANG00000038242	-	100	79.422	ENSHGLG00000001905	-	99	80.000	Heterocephalus_glaber_female
ENSCANG00000038242	-	100	79.422	ENSHGLG00100018676	-	100	79.643	Heterocephalus_glaber_male
ENSCANG00000038242	-	100	79.433	ENSHGLG00100011252	-	96	81.338	Heterocephalus_glaber_male
ENSCANG00000038242	-	85	80.851	ENSHCOG00000017136	smn1	87	51.724	Hippocampus_comes
ENSCANG00000038242	-	93	52.471	ENSIPUG00000012580	smn1	83	52.256	Ictalurus_punctatus
ENSCANG00000038242	-	100	88.087	ENSSTOG00000012288	-	100	88.087	Ictidomys_tridecemlineatus
ENSCANG00000038242	-	66	61.494	ENSJJAG00000014853	-	89	65.143	Jaculus_jaculus
ENSCANG00000038242	-	93	55.147	ENSKMAG00000007239	smn1	96	53.435	Kryptolebias_marmoratus
ENSCANG00000038242	-	93	52.574	ENSLBEG00000022550	smn1	94	54.380	Labrus_bergylta
ENSCANG00000038242	-	95	36.429	ENSLACG00000009808	-	90	39.350	Latimeria_chalumnae
ENSCANG00000038242	-	93	54.198	ENSLOCG00000011339	smn1	93	56.790	Lepisosteus_oculatus
ENSCANG00000038242	-	99	86.813	ENSLAFG00000003425	-	100	80.986	Loxodonta_africana
ENSCANG00000038242	-	100	99.237	ENSMFAG00000031523	SMN1	100	99.237	Macaca_fascicularis
ENSCANG00000038242	-	100	95.604	ENSMFAG00000008812	-	100	93.197	Macaca_fascicularis
ENSCANG00000038242	-	100	99.237	ENSMMUG00000020214	SMN1	100	99.237	Macaca_mulatta
ENSCANG00000038242	-	100	93.407	ENSMMUG00000030594	-	100	92.517	Macaca_mulatta
ENSCANG00000038242	-	100	98.901	ENSMNEG00000035094	-	100	98.901	Macaca_nemestrina
ENSCANG00000038242	-	76	84.305	ENSMNEG00000036423	-	87	84.305	Macaca_nemestrina
ENSCANG00000038242	-	100	98.855	ENSMLEG00000041902	-	100	98.855	Mandrillus_leucophaeus
ENSCANG00000038242	-	93	51.331	ENSMAMG00000011034	smn1	94	52.920	Mastacembelus_armatus
ENSCANG00000038242	-	93	54.198	ENSMZEG00005013634	smn1	94	54.135	Maylandia_zebra
ENSCANG00000038242	-	68	57.672	ENSMGAG00000008889	-	95	54.822	Meleagris_gallopavo
ENSCANG00000038242	-	99	83.516	ENSMAUG00000010262	Smn1	97	82.143	Mesocricetus_auratus
ENSCANG00000038242	-	99	87.912	ENSMICG00000034708	-	99	87.912	Microcebus_murinus
ENSCANG00000038242	-	100	82.014	ENSMOCG00000017833	Smn1	97	82.562	Microtus_ochrogaster
ENSCANG00000038242	-	94	50.000	ENSMMOG00000005504	smn1	93	50.000	Mola_mola
ENSCANG00000038242	-	85	83.333	ENSMODG00000001436	-	95	70.213	Monodelphis_domestica
ENSCANG00000038242	-	93	50.000	ENSMALG00000008025	smn1	94	52.536	Monopterus_albus
ENSCANG00000038242	-	99	84.615	MGP_CAROLIEiJ_G0018836	Smn1	96	83.929	Mus_caroli
ENSCANG00000038242	-	99	83.516	ENSMUSG00000021645	Smn1	96	83.929	Mus_musculus
ENSCANG00000038242	-	99	82.418	MGP_PahariEiJ_G0015911	Smn1	96	80.935	Mus_pahari
ENSCANG00000038242	-	99	83.516	MGP_SPRETEiJ_G0019718	Smn1	96	83.214	Mus_spretus
ENSCANG00000038242	-	100	89.209	ENSMPUG00000014470	-	95	90.262	Mustela_putorius_furo
ENSCANG00000038242	-	94	90.000	ENSMLUG00000010603	-	92	87.805	Myotis_lucifugus
ENSCANG00000038242	-	100	84.173	ENSNGAG00000019833	Smn1	97	85.000	Nannospalax_galili
ENSCANG00000038242	-	93	54.613	ENSNBRG00000023000	smn1	94	56.000	Neolamprologus_brichardi
ENSCANG00000038242	-	100	96.565	ENSNLEG00000004454	-	100	96.565	Nomascus_leucogenys
ENSCANG00000038242	-	81	64.602	ENSMEUG00000011393	-	99	66.079	Notamacropus_eugenii
ENSCANG00000038242	-	81	90.625	ENSOPRG00000002015	-	100	82.609	Ochotona_princeps
ENSCANG00000038242	-	100	81.272	ENSODEG00000015976	-	97	81.272	Octodon_degus
ENSCANG00000038242	-	94	53.846	ENSONIG00000011799	smn1	95	53.137	Oreochromis_niloticus
ENSCANG00000038242	-	77	90.698	ENSOANG00000001626	-	95	66.052	Ornithorhynchus_anatinus
ENSCANG00000038242	-	100	79.078	ENSOCUG00000025183	-	96	79.930	Oryctolagus_cuniculus
ENSCANG00000038242	-	94	88.406	ENSOCUG00000026649	-	97	83.624	Oryctolagus_cuniculus
ENSCANG00000038242	-	100	84.838	ENSOCUG00000017097	-	99	84.828	Oryctolagus_cuniculus
ENSCANG00000038242	-	60	60.759	ENSORLG00000010552	smn1	94	52.399	Oryzias_latipes
ENSCANG00000038242	-	86	68.182	ENSORLG00020007936	smn1	93	53.469	Oryzias_latipes_hni
ENSCANG00000038242	-	60	57.927	ENSORLG00015022425	smn1	94	52.399	Oryzias_latipes_hsok
ENSCANG00000038242	-	58	62.914	ENSOMEG00000007824	smn1	94	52.414	Oryzias_melastigma
ENSCANG00000038242	-	96	80.074	ENSOGAG00000031414	-	94	80.074	Otolemur_garnettii
ENSCANG00000038242	-	93	83.077	ENSOARG00000005425	-	99	82.784	Ovis_aries
ENSCANG00000038242	-	100	96.703	ENSPPAG00000036640	-	100	96.703	Pan_paniscus
ENSCANG00000038242	-	100	88.489	ENSPPRG00000005575	-	97	90.000	Panthera_pardus
ENSCANG00000038242	-	100	88.172	ENSPTIG00000007745	-	97	89.680	Panthera_tigris_altaica
ENSCANG00000038242	-	100	96.947	ENSPTRG00000016955	-	100	96.947	Pan_troglodytes
ENSCANG00000038242	-	100	94.505	ENSPANG00000000253	-	98	92.708	Papio_anubis
ENSCANG00000038242	-	100	98.855	ENSPANG00000013601	-	100	98.855	Papio_anubis
ENSCANG00000038242	-	76	91.892	ENSPKIG00000011096	smn1	93	55.187	Paramormyrops_kingsleyae
ENSCANG00000038242	-	93	62.030	ENSPSIG00000014787	-	90	59.410	Pelodiscus_sinensis
ENSCANG00000038242	-	93	49.814	ENSPMGG00000012285	smn1	95	51.321	Periophthalmus_magnuspinnatus
ENSCANG00000038242	-	91	42.412	ENSPMAG00000005004	smn1	94	40.418	Petromyzon_marinus
ENSCANG00000038242	-	97	71.111	ENSPCIG00000025764	-	97	71.986	Phascolarctos_cinereus
ENSCANG00000038242	-	93	53.788	ENSPFOG00000007786	smn1	94	53.309	Poecilia_formosa
ENSCANG00000038242	-	90	57.438	ENSPLAG00000012071	smn1	93	57.676	Poecilia_latipinna
ENSCANG00000038242	-	90	57.025	ENSPMEG00000017085	smn1	93	57.261	Poecilia_mexicana
ENSCANG00000038242	-	93	54.924	ENSPREG00000005824	smn1	93	57.676	Poecilia_reticulata
ENSCANG00000038242	-	90	58.871	ENSPPYG00000019189	-	99	65.138	Pongo_abelii
ENSCANG00000038242	-	91	95.539	ENSPPYG00000015533	-	97	95.539	Pongo_abelii
ENSCANG00000038242	-	87	85.938	ENSPCAG00000004187	-	99	82.463	Procavia_capensis
ENSCANG00000038242	-	85	94.915	ENSPCOG00000022307	-	90	85.294	Propithecus_coquereli
ENSCANG00000038242	-	100	89.531	ENSPVAG00000005977	-	99	89.655	Pteropus_vampyrus
ENSCANG00000038242	-	93	54.613	ENSPNYG00000014148	smn1	94	56.000	Pundamilia_nyererei
ENSCANG00000038242	-	94	50.187	ENSPNAG00000014007	smn1	82	50.181	Pygocentrus_nattereri
ENSCANG00000038242	-	99	83.516	ENSRNOG00000018067	Smn1	96	82.500	Rattus_norvegicus
ENSCANG00000038242	-	93	91.209	ENSRBIG00000036775	-	95	81.071	Rhinopithecus_bieti
ENSCANG00000038242	-	100	99.618	ENSRBIG00000037052	-	100	99.618	Rhinopithecus_bieti
ENSCANG00000038242	-	100	82.482	ENSRROG00000031088	-	100	79.322	Rhinopithecus_roxellana
ENSCANG00000038242	-	100	99.618	ENSRROG00000039399	-	100	99.618	Rhinopithecus_roxellana
ENSCANG00000038242	-	87	85.600	ENSSBOG00000020112	-	87	86.000	Saimiri_boliviensis_boliviensis
ENSCANG00000038242	-	100	95.604	ENSSBOG00000011665	-	100	95.604	Saimiri_boliviensis_boliviensis
ENSCANG00000038242	-	99	69.784	ENSSHAG00000001499	-	96	71.910	Sarcophilus_harrisii
ENSCANG00000038242	-	93	52.874	ENSSFOG00015015507	smn1	94	54.878	Scleropages_formosus
ENSCANG00000038242	-	93	51.711	ENSSMAG00000007922	smn1	94	52.536	Scophthalmus_maximus
ENSCANG00000038242	-	93	52.941	ENSSDUG00000018533	smn1	94	53.261	Seriola_dumerili
ENSCANG00000038242	-	93	53.309	ENSSLDG00000021135	smn1	94	53.623	Seriola_lalandi_dorsalis
ENSCANG00000038242	-	88	71.622	ENSSPUG00000000373	-	93	64.179	Sphenodon_punctatus
ENSCANG00000038242	-	93	53.488	ENSSPAG00000004345	smn1	94	53.623	Stegastes_partitus
ENSCANG00000038242	-	97	65.354	ENSSSCG00000029127	-	96	65.726	Sus_scrofa
ENSCANG00000038242	-	72	58.768	ENSSSCG00000033865	-	94	62.559	Sus_scrofa
ENSCANG00000038242	-	100	88.489	ENSSSCG00000016970	-	99	88.660	Sus_scrofa
ENSCANG00000038242	-	98	59.783	ENSTGUG00000001548	-	96	61.278	Taeniopygia_guttata
ENSCANG00000038242	-	95	50.370	ENSTRUG00000000736	smn	95	49.091	Takifugu_rubripes
ENSCANG00000038242	-	94	48.162	ENSTNIG00000009892	smn1	95	48.736	Tetraodon_nigroviridis
ENSCANG00000038242	-	70	88.587	ENSTBEG00000002399	-	89	88.587	Tupaia_belangeri
ENSCANG00000038242	-	96	85.714	ENSTTRG00000005080	-	95	85.305	Tursiops_truncatus
ENSCANG00000038242	-	70	88.587	ENSUAMG00000024947	-	67	88.587	Ursus_americanus
ENSCANG00000038242	-	96	89.850	ENSUMAG00000007842	-	72	89.964	Ursus_maritimus
ENSCANG00000038242	-	88	88.750	ENSVPAG00000009887	-	96	75.849	Vicugna_pacos
ENSCANG00000038242	-	95	88.809	ENSVVUG00000006934	-	97	88.172	Vulpes_vulpes
ENSCANG00000038242	-	89	38.951	ENSXETG00000004912	-	79	60.317	Xenopus_tropicalis
ENSCANG00000038242	-	90	67.901	ENSXETG00000018189	smn2	95	55.208	Xenopus_tropicalis
ENSCANG00000038242	-	94	53.759	ENSXMAG00000001521	smn1	94	56.379	Xiphophorus_maculatus