EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCANG00000038720 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Minus strand
Length: 3381 bases
Position: chrKN979874.1:3010586-3013966
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000030122	Ribosomal_S5_C	PF03719.15	7e-16	1	1
ENSCANP00000030118	Ribosomal_S5	PF00333.20	3.2e-28	1	1
ENSCANP00000030121	Ribosomal_S5	PF00333.20	3.6e-28	1	1
ENSCANP00000030122	Ribosomal_S5	PF00333.20	7.4e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000053320	-	597	-	ENSCANP00000030118	198 (aa)	-	A0A2K5JMP3
ENSCANT00000053323	-	621	-	ENSCANP00000030121	206 (aa)	-	A0A2K5JMP7
ENSCANT00000053324	-	810	-	ENSCANP00000030122	269 (aa)	-	A0A2K5JMT6

Gene Model

Click here to download ENSCANG00000038720's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000038720's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCANG00000038720	-	61	76.829	ENSCANG00000028142	-	68	83.673
ENSCANG00000038720	-	75	83.974	ENSCANG00000037678	-	72	81.188
ENSCANG00000038720	-	73	86.806	ENSCANG00000032473	-	68	86.957
ENSCANG00000038720	-	95	65.079	ENSCANG00000042680	-	67	86.928
ENSCANG00000038720	-	64	88.095	ENSCANG00000025215	-	67	75.843
ENSCANG00000038720	-	56	71.523	ENSCANG00000038962	-	70	71.523
ENSCANG00000038720	-	66	94.656	ENSCANG00000040571	-	93	90.164
ENSCANG00000038720	-	70	85.507	ENSCANG00000041737	-	70	79.775
ENSCANG00000038720	-	75	77.852	ENSCANG00000031770	-	92	71.845

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000038720	-	60	90.756	ENSCJAG00000048258	-	89	88.095	Callithrix_jacchus
ENSCANG00000038720	-	56	89.189	ENSCAFG00020011187	-	74	88.889	Canis_lupus_dingo
ENSCANG00000038720	-	92	50.000	ENSTSYG00000036206	-	70	84.211	Carlito_syrichta
ENSCANG00000038720	-	68	69.630	ENSDORG00000024357	-	64	60.317	Dipodomys_ordii
ENSCANG00000038720	-	55	85.135	ENSEASG00005016168	-	75	85.135	Equus_asinus_asinus
ENSCANG00000038720	-	95	65.079	ENSGGOG00000022802	-	100	72.081	Gorilla_gorilla
ENSCANG00000038720	-	67	90.977	ENSMFAG00000032180	-	65	89.630	Macaca_fascicularis
ENSCANG00000038720	-	70	70.745	ENSMFAG00000001303	-	67	84.722	Macaca_fascicularis
ENSCANG00000038720	-	55	92.517	ENSMLEG00000038670	-	98	75.472	Mandrillus_leucophaeus
ENSCANG00000038720	-	61	70.303	ENSMAUG00000001106	-	70	75.000	Mesocricetus_auratus
ENSCANG00000038720	-	55	76.351	ENSMOCG00000010955	-	67	76.351	Microtus_ochrogaster
ENSCANG00000038720	-	67	83.333	ENSNGAG00000014320	-	74	83.333	Nannospalax_galili
ENSCANG00000038720	-	57	83.117	ENSODEG00000010744	-	67	83.117	Octodon_degus
ENSCANG00000038720	-	58	70.513	ENSOCUG00000027539	-	70	70.513	Oryctolagus_cuniculus
ENSCANG00000038720	-	94	56.085	ENSPPAG00000034716	-	65	80.952	Pan_paniscus
ENSCANG00000038720	-	95	65.426	ENSPTRG00000044776	-	100	71.574	Pan_troglodytes
ENSCANG00000038720	-	90	76.404	ENSPTRG00000051922	-	65	87.500	Pan_troglodytes
ENSCANG00000038720	-	70	89.130	ENSPEMG00000016591	-	68	80.337	Peromyscus_maniculatus_bairdii
ENSCANG00000038720	-	55	89.796	ENSPCOG00000026440	-	99	76.887	Propithecus_coquereli
ENSCANG00000038720	-	93	70.270	ENSRBIG00000035779	-	64	76.190	Rhinopithecus_bieti
ENSCANG00000038720	-	67	92.481	ENSRBIG00000030472	-	76	90.062	Rhinopithecus_bieti
ENSCANG00000038720	-	71	87.413	ENSRROG00000017055	-	84	89.474	Rhinopithecus_roxellana
ENSCANG00000038720	-	88	63.842	ENSSBOG00000014367	-	63	86.232	Saimiri_boliviensis_boliviensis