EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCANG00000039177 (Gene tree)
Gene ID: 105527771
Gene Symbol: APOBEC3C
Alias: APOBEC1L|ARDC2|ARDC4|ARP5|PBI|bK150C2.3
Full Name: DNA dC->dU-editing enzyme APOBEC-3C
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Minus strand
Length: 4157 bases
Position: chrKN985306.1:2389231-2393387
Accession: 105527771
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000031012	APOBEC_N	PF08210.11	4.5e-57	1	1
ENSCANP00000031012	APOBEC_C	PF05240.14	1.2e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000054224	APOBEC3C-201	1285	XM_011964209	ENSCANP00000031012	190 (aa)	XP_011819599	A0A2K5JQB1

Gene Model

Click here to download ENSCANG00000039177's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000039177's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCANG00000039177	APOBEC3C	100	68.817	ENSCANG00000033269	-	99	70.109
ENSCANG00000039177	APOBEC3C	95	39.683	ENSCANG00000029968	-	58	39.683
ENSCANG00000039177	APOBEC3C	99	40.306	ENSCANG00000030513	-	97	40.306
ENSCANG00000039177	APOBEC3C	100	76.344	ENSCANG00000032904	-	100	76.344
ENSCANG00000039177	APOBEC3C	100	74.194	ENSCANG00000031957	-	100	74.194
ENSCANG00000039177	APOBEC3C	91	44.253	ENSCANG00000035131	AICDA	86	44.253
ENSCANG00000039177	APOBEC3C	93	35.359	ENSCANG00000035072	APOBEC2	79	35.556

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000039177	APOBEC3C	100	73.684	ENSG00000243811	APOBEC3D	100	73.684	Homo_sapiens
ENSCANG00000039177	APOBEC3C	100	82.632	ENSG00000244509	APOBEC3C	100	82.632	Homo_sapiens
ENSCANG00000039177	APOBEC3C	100	76.882	ENSG00000128394	APOBEC3F	100	76.882	Homo_sapiens
ENSCANG00000039177	APOBEC3C	100	66.842	ENSANAG00000030088	-	97	66.129	Aotus_nancymaae
ENSCANG00000039177	APOBEC3C	69	65.152	ENSCJAG00000015317	-	100	65.152	Callithrix_jacchus
ENSCANG00000039177	APOBEC3C	98	48.421	ENSCAFG00020002615	-	99	48.421	Canis_lupus_dingo
ENSCANG00000039177	APOBEC3C	98	52.660	ENSTSYG00000034260	-	99	52.660	Carlito_syrichta
ENSCANG00000039177	APOBEC3C	96	54.645	ENSTSYG00000028254	-	99	54.645	Carlito_syrichta
ENSCANG00000039177	APOBEC3C	96	48.901	ENSTSYG00000030036	-	99	48.901	Carlito_syrichta
ENSCANG00000039177	APOBEC3C	97	63.784	ENSCCAG00000030932	-	84	63.784	Cebus_capucinus
ENSCANG00000039177	APOBEC3C	100	88.421	ENSCATG00000043226	APOBEC3C	100	88.421	Cercocebus_atys
ENSCANG00000039177	APOBEC3C	99	73.656	ENSCATG00000033502	-	100	73.656	Cercocebus_atys
ENSCANG00000039177	APOBEC3C	100	74.194	ENSCSAG00000006382	APOBEC3F	100	74.194	Chlorocebus_sabaeus
ENSCANG00000039177	APOBEC3C	100	86.842	ENSCSAG00000006402	APOBEC3C	100	86.842	Chlorocebus_sabaeus
ENSCANG00000039177	APOBEC3C	97	41.489	ENSDNOG00000044642	-	99	41.489	Dasypus_novemcinctus
ENSCANG00000039177	APOBEC3C	100	41.667	ENSEASG00005018641	-	100	41.667	Equus_asinus_asinus
ENSCANG00000039177	APOBEC3C	98	47.312	ENSECAG00000006071	-	100	46.154	Equus_caballus
ENSCANG00000039177	APOBEC3C	100	77.419	ENSGGOG00000038678	APOBEC3F	100	77.419	Gorilla_gorilla
ENSCANG00000039177	APOBEC3C	100	78.947	ENSGGOG00000036587	-	100	78.947	Gorilla_gorilla
ENSCANG00000039177	APOBEC3C	98	45.989	ENSHGLG00000017315	-	84	44.565	Heterocephalus_glaber_female
ENSCANG00000039177	APOBEC3C	98	45.989	ENSHGLG00100003105	-	93	45.989	Heterocephalus_glaber_male
ENSCANG00000039177	APOBEC3C	100	85.789	ENSMFAG00000016792	APOBEC3C	100	85.789	Macaca_fascicularis
ENSCANG00000039177	APOBEC3C	100	75.269	ENSMFAG00000002331	-	100	75.269	Macaca_fascicularis
ENSCANG00000039177	APOBEC3C	100	74.194	ENSMFAG00000004037	APOBEC3F	100	74.194	Macaca_fascicularis
ENSCANG00000039177	APOBEC3C	100	73.656	ENSMMUG00000004017	APOBEC3F	99	75.269	Macaca_mulatta
ENSCANG00000039177	APOBEC3C	97	86.413	ENSMMUG00000004018	APOBEC3C	95	86.413	Macaca_mulatta
ENSCANG00000039177	APOBEC3C	100	75.269	ENSMNEG00000043316	APOBEC3D	100	75.269	Macaca_nemestrina
ENSCANG00000039177	APOBEC3C	100	87.368	ENSMNEG00000045196	APOBEC3C	100	87.368	Macaca_nemestrina
ENSCANG00000039177	APOBEC3C	100	73.656	ENSMLEG00000029642	APOBEC3F	100	73.656	Mandrillus_leucophaeus
ENSCANG00000039177	APOBEC3C	100	89.474	ENSMLEG00000036992	APOBEC3C	100	89.474	Mandrillus_leucophaeus
ENSCANG00000039177	APOBEC3C	99	55.851	ENSMICG00000042615	-	89	55.851	Microcebus_murinus
ENSCANG00000039177	APOBEC3C	97	46.073	ENSMLUG00000023676	-	99	46.073	Myotis_lucifugus
ENSCANG00000039177	APOBEC3C	100	79.474	ENSNLEG00000028392	APOBEC3C	100	79.474	Nomascus_leucogenys
ENSCANG00000039177	APOBEC3C	100	60.000	ENSNLEG00000035811	-	100	60.000	Nomascus_leucogenys
ENSCANG00000039177	APOBEC3C	99	45.213	ENSOGAG00000030300	-	98	45.213	Otolemur_garnettii
ENSCANG00000039177	APOBEC3C	98	48.128	ENSOGAG00000032498	-	99	48.128	Otolemur_garnettii
ENSCANG00000039177	APOBEC3C	98	46.111	ENSOGAG00000033404	-	100	46.111	Otolemur_garnettii
ENSCANG00000039177	APOBEC3C	100	83.158	ENSPPAG00000014118	APOBEC3C	100	83.158	Pan_paniscus
ENSCANG00000039177	APOBEC3C	100	73.684	ENSPPAG00000028218	-	100	73.684	Pan_paniscus
ENSCANG00000039177	APOBEC3C	97	48.913	ENSPPRG00000003726	-	97	48.913	Panthera_pardus
ENSCANG00000039177	APOBEC3C	100	73.158	ENSPTRG00000041588	APOBEC3D	100	73.158	Pan_troglodytes
ENSCANG00000039177	APOBEC3C	100	76.344	ENSPTRG00000014385	APOBEC3C	100	76.344	Pan_troglodytes
ENSCANG00000039177	APOBEC3C	100	82.632	ENSPANG00000010775	APOBEC3F	100	82.632	Papio_anubis
ENSCANG00000039177	APOBEC3C	100	81.579	ENSPPYG00000011832	APOBEC3C	100	81.579	Pongo_abelii
ENSCANG00000039177	APOBEC3C	67	53.906	ENSPCOG00000022067	-	97	53.906	Propithecus_coquereli
ENSCANG00000039177	APOBEC3C	69	54.545	ENSPCOG00000018072	-	99	54.545	Propithecus_coquereli
ENSCANG00000039177	APOBEC3C	65	47.154	ENSPVAG00000009461	-	50	47.154	Pteropus_vampyrus
ENSCANG00000039177	APOBEC3C	100	75.269	ENSRBIG00000030834	-	100	75.269	Rhinopithecus_bieti
ENSCANG00000039177	APOBEC3C	100	86.316	ENSRBIG00000030323	-	100	86.316	Rhinopithecus_bieti
ENSCANG00000039177	APOBEC3C	100	73.333	ENSRBIG00000042297	-	99	75.159	Rhinopithecus_bieti
ENSCANG00000039177	APOBEC3C	100	86.316	ENSRROG00000029045	APOBEC3C	100	86.316	Rhinopithecus_roxellana
ENSCANG00000039177	APOBEC3C	100	75.806	ENSRROG00000028557	-	100	75.806	Rhinopithecus_roxellana
ENSCANG00000039177	APOBEC3C	100	72.778	ENSRROG00000029996	-	100	72.778	Rhinopithecus_roxellana
ENSCANG00000039177	APOBEC3C	100	65.789	ENSSBOG00000032780	-	100	65.789	Saimiri_boliviensis_boliviensis
ENSCANG00000039177	APOBEC3C	88	50.595	ENSUAMG00000004433	-	93	50.595	Ursus_americanus
ENSCANG00000039177	APOBEC3C	98	50.000	ENSUMAG00000014441	-	86	50.000	Ursus_maritimus
ENSCANG00000039177	APOBEC3C	77	50.336	ENSVVUG00000014628	-	91	50.000	Vulpes_vulpes