EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCANG00000039197 (Gene tree)
Gene ID
105527211
Gene Symbol
PATL1
Alias
FLJ36874|Pat1b
Full Name
PAT1 homolog 1%2C processing body mRNA decay factor
Gene Type
protein_coding
Species
Colobus_angolensis_palliatus
Status
putative
Strand
Minus strand
Length
40054 bases
Position
chrKN984883.1:8008708-8048761
Accession
105527211
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCANP00000031167PAT1PF09770.91.4e-1811
ENSCANP00000031174PAT1PF09770.91.4e-0911
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCANT00000054382PATL1-2012313XM_011963501ENSCANP00000031167770 (aa)XP_011818891A0A2K5JQQ6
ENSCANT00000054389PATL1-2021734-ENSCANP00000031174577 (aa)-A0A2K5JQQ4
Gene Model
Click here to download ENSCANG00000039197's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000039197's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCANG00000039197PATL16334.490ENSCANG00000013856PATL27436.066
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCANG00000039197PATL16334.827ENSG00000229474PATL29937.088Homo_sapiens
ENSCANG00000039197PATL19999.133ENSG00000166889PATL19998.960Homo_sapiens
ENSCANG00000039197PATL16834.502ENSAPOG00000022988patl27333.087Acanthochromis_polyacanthus
ENSCANG00000039197PATL15452.758ENSAPOG00000021290patl19845.739Acanthochromis_polyacanthus
ENSCANG00000039197PATL19997.387ENSAMEG00000014215PATL19996.494Ailuropoda_melanoleuca
ENSCANG00000039197PATL16234.362ENSAMEG00000014997PATL27534.951Ailuropoda_melanoleuca
ENSCANG00000039197PATL19645.501ENSACIG00000005182patl19946.144Amphilophus_citrinellus
ENSCANG00000039197PATL18731.711ENSAOCG00000023738patl25335.227Amphiprion_ocellaris
ENSCANG00000039197PATL16634.302ENSAPEG00000011299patl26434.633Amphiprion_percula
ENSCANG00000039197PATL16264.407ENSAPEG00000021391patl19941.279Amphiprion_percula
ENSCANG00000039197PATL16434.387ENSATEG00000019567patl27033.728Anabas_testudineus
ENSCANG00000039197PATL18478.788ENSATEG00000002230patl18066.102Anabas_testudineus
ENSCANG00000039197PATL15339.467ENSAPLG00000003980PATL26439.467Anas_platyrhynchos
ENSCANG00000039197PATL17668.018ENSAPLG00000013394PATL19970.492Anas_platyrhynchos
ENSCANG00000039197PATL19981.501ENSACAG00000006607PATL19978.988Anolis_carolinensis
ENSCANG00000039197PATL19999.476ENSANAG00000023078PATL19999.090Aotus_nancymaae
ENSCANG00000039197PATL16266.102ENSACLG00000005144patl18449.694Astatotilapia_calliptera
ENSCANG00000039197PATL18731.462ENSACLG00000010326patl25436.754Astatotilapia_calliptera
ENSCANG00000039197PATL17535.144ENSAMXG00000020293patl26335.639Astyanax_mexicanus
ENSCANG00000039197PATL19641.176ENSAMXG00000010731patl19945.725Astyanax_mexicanus
ENSCANG00000039197PATL19997.561ENSBTAG00000005913PATL19995.584Bos_taurus
ENSCANG00000039197PATL19999.133ENSCJAG00000016192PATL19999.090Callithrix_jacchus
ENSCANG00000039197PATL16335.102ENSCJAG00000002379PATL27236.957Callithrix_jacchus
ENSCANG00000039197PATL16434.524ENSCAFG00000013629PATL27236.232Canis_familiaris
ENSCANG00000039197PATL19997.405ENSCAFG00000007581PATL19997.143Canis_familiaris
ENSCANG00000039197PATL19997.735ENSCAFG00020001648PATL19997.120Canis_lupus_dingo
ENSCANG00000039197PATL16434.524ENSCAFG00020022169PATL27236.232Canis_lupus_dingo
ENSCANG00000039197PATL19995.321ENSCHIG00000025913PATL19994.286Capra_hircus
ENSCANG00000039197PATL16236.831ENSCHIG00000026665PATL27437.825Capra_hircus
ENSCANG00000039197PATL19997.400ENSTSYG00000012748PATL19697.128Carlito_syrichta
ENSCANG00000039197PATL19992.000ENSCAPG00000013668PATL19991.310Cavia_aperea
ENSCANG00000039197PATL19989.480ENSCPOG00000006827PATL19989.607Cavia_porcellus
ENSCANG00000039197PATL19999.480ENSCCAG00000023759PATL19999.350Cebus_capucinus
ENSCANG00000039197PATL19999.610ENSCATG00000009629PATL19999.610Cercocebus_atys
ENSCANG00000039197PATL15734.598ENSCLAG00000014407PATL27335.714Chinchilla_lanigera
ENSCANG00000039197PATL19993.892ENSCLAG00000003427PATL110092.549Chinchilla_lanigera
ENSCANG00000039197PATL19099.568ENSCSAG00000006095PATL110099.568Chlorocebus_sabaeus
ENSCANG00000039197PATL16896.970ENSCHOG00000001611PATL18496.970Choloepus_hoffmanni
ENSCANG00000039197PATL15340.291ENSCPBG00000006150PATL25939.709Chrysemys_picta_bellii
ENSCANG00000039197PATL19530.225ENSCING00000021535-10030.079Ciona_intestinalis
ENSCANG00000039197PATL19996.749ENSCGRG00001024927Patl19996.749Cricetulus_griseus_chok1gshd
ENSCANG00000039197PATL19997.033ENSCGRG00000000461Patl110096.732Cricetulus_griseus_crigri
ENSCANG00000039197PATL16235.124ENSCSEG00000009438patl25935.160Cynoglossus_semilaevis
ENSCANG00000039197PATL18476.667ENSCSEG00000008261patl18252.941Cynoglossus_semilaevis
ENSCANG00000039197PATL15431.002ENSCVAG00000016203patl26330.556Cyprinodon_variegatus
ENSCANG00000039197PATL18460.092ENSCVAG00000006664patl19946.066Cyprinodon_variegatus
ENSCANG00000039197PATL19946.659ENSDARG00000017423patl19946.061Danio_rerio
ENSCANG00000039197PATL16735.849ENSDARG00000089567patl26435.178Danio_rerio
ENSCANG00000039197PATL19989.817ENSDNOG00000038865PATL19894.291Dasypus_novemcinctus
ENSCANG00000039197PATL19996.880ENSDORG00000000237Patl19996.489Dipodomys_ordii
ENSCANG00000039197PATL15136.829ENSDORG00000026649Patl27235.806Dipodomys_ordii
ENSCANG00000039197PATL19997.391ENSEASG00005007963PATL19996.887Equus_asinus_asinus
ENSCANG00000039197PATL19997.391ENSECAG00000011411PATL19996.757Equus_caballus
ENSCANG00000039197PATL16934.206ENSELUG00000023244patl25436.124Esox_lucius
ENSCANG00000039197PATL18577.419ENSELUG00000024249patl19945.358Esox_lucius
ENSCANG00000039197PATL19996.619ENSFCAG00000015573PATL19996.619Felis_catus
ENSCANG00000039197PATL16234.898ENSFCAG00000027170PATL27335.266Felis_catus
ENSCANG00000039197PATL19980.704ENSFALG00000012150PATL19979.634Ficedula_albicollis
ENSCANG00000039197PATL19632.573ENSFALG00000009768PATL25539.225Ficedula_albicollis
ENSCANG00000039197PATL19993.368ENSFDAG00000016128PATL110091.895Fukomys_damarensis
ENSCANG00000039197PATL15134.422ENSFDAG00000012242PATL27335.930Fukomys_damarensis
ENSCANG00000039197PATL16166.102ENSFHEG00000017790patl18357.746Fundulus_heteroclitus
ENSCANG00000039197PATL16132.720ENSGMOG00000005666patl29934.524Gadus_morhua
ENSCANG00000039197PATL19979.412ENSGALG00000042641PATL19978.010Gallus_gallus
ENSCANG00000039197PATL16458.333ENSGAFG00000006508patl18458.333Gambusia_affinis
ENSCANG00000039197PATL18632.489ENSGAFG00000019344patl25537.349Gambusia_affinis
ENSCANG00000039197PATL19947.748ENSGACG00000016448patl19948.849Gasterosteus_aculeatus
ENSCANG00000039197PATL19983.808ENSGAGG00000004461PATL110084.384Gopherus_agassizii
ENSCANG00000039197PATL16335.306ENSGGOG00000025923PATL27436.534Gorilla_gorilla
ENSCANG00000039197PATL19999.133ENSGGOG00000004335PATL19998.960Gorilla_gorilla
ENSCANG00000039197PATL16234.917ENSHBUG00000005929patl26136.516Haplochromis_burtoni
ENSCANG00000039197PATL16266.102ENSHBUG00000005365patl18449.694Haplochromis_burtoni
ENSCANG00000039197PATL19994.107ENSHGLG00000018173PATL19993.368Heterocephalus_glaber_female
ENSCANG00000039197PATL19992.496ENSHGLG00100003453PATL110091.895Heterocephalus_glaber_male
ENSCANG00000039197PATL19930.807ENSHCOG00000016754patl25635.714Hippocampus_comes
ENSCANG00000039197PATL19264.407ENSHCOG00000001898patl18253.846Hippocampus_comes
ENSCANG00000039197PATL16733.962ENSIPUG00000020692patl25635.971Ictalurus_punctatus
ENSCANG00000039197PATL15437.831ENSSTOG00000033848PATL27237.108Ictidomys_tridecemlineatus
ENSCANG00000039197PATL19897.703ENSSTOG00000013764PATL19997.493Ictidomys_tridecemlineatus
ENSCANG00000039197PATL19996.853ENSJJAG00000010135Patl110096.597Jaculus_jaculus
ENSCANG00000039197PATL15980.000ENSKMAG00000020848patl18254.930Kryptolebias_marmoratus
ENSCANG00000039197PATL19169.231ENSLBEG00000023617patl18157.500Labrus_bergylta
ENSCANG00000039197PATL16135.639ENSLBEG00000022344patl25535.945Labrus_bergylta
ENSCANG00000039197PATL19856.957ENSLACG00000004640PATL19956.680Latimeria_chalumnae
ENSCANG00000039197PATL19946.966ENSLOCG00000000717patl19947.458Lepisosteus_oculatus
ENSCANG00000039197PATL19996.753ENSLAFG00000015161PATL19996.753Loxodonta_africana
ENSCANG00000039197PATL15138.107ENSLAFG00000031124PATL27137.340Loxodonta_africana
ENSCANG00000039197PATL19999.651ENSMFAG00000040851PATL19999.610Macaca_fascicularis
ENSCANG00000039197PATL19999.610ENSMMUG00000017287PATL19999.610Macaca_mulatta
ENSCANG00000039197PATL19999.610ENSMNEG00000038692PATL19999.610Macaca_nemestrina
ENSCANG00000039197PATL19999.480ENSMLEG00000030044PATL19999.480Mandrillus_leucophaeus
ENSCANG00000039197PATL16134.746ENSMAMG00000013327patl26135.308Mastacembelus_armatus
ENSCANG00000039197PATL18877.419ENSMAMG00000003950patl19846.642Mastacembelus_armatus
ENSCANG00000039197PATL16266.102ENSMZEG00005013404patl18449.694Maylandia_zebra
ENSCANG00000039197PATL18731.462ENSMZEG00005014292patl25436.754Maylandia_zebra
ENSCANG00000039197PATL19977.739ENSMGAG00000003406PATL19976.364Meleagris_gallopavo
ENSCANG00000039197PATL18596.626ENSMAUG00000012059Patl19696.626Mesocricetus_auratus
ENSCANG00000039197PATL19999.127ENSMICG00000004172PATL19899.208Microcebus_murinus
ENSCANG00000039197PATL15235.910ENSMOCG00000015367Patl27235.910Microtus_ochrogaster
ENSCANG00000039197PATL19996.707ENSMOCG00000010087Patl19996.619Microtus_ochrogaster
ENSCANG00000039197PATL16231.027ENSMMOG00000001299patl26031.579Mola_mola
ENSCANG00000039197PATL19945.806ENSMMOG00000013711patl19945.455Mola_mola
ENSCANG00000039197PATL16236.179ENSMODG00000017690PATL27135.981Monodelphis_domestica
ENSCANG00000039197PATL19988.428ENSMODG00000020201PATL19987.678Monodelphis_domestica
ENSCANG00000039197PATL16233.194ENSMALG00000008131patl25234.588Monopterus_albus
ENSCANG00000039197PATL19439.181ENSMALG00000018706patl19755.228Monopterus_albus
ENSCANG00000039197PATL19996.619MGP_CAROLIEiJ_G0022739Patl19996.619Mus_caroli
ENSCANG00000039197PATL19996.749ENSMUSG00000046139Patl19996.749Mus_musculus
ENSCANG00000039197PATL19996.489MGP_PahariEiJ_G0014233Patl19996.489Mus_pahari
ENSCANG00000039197PATL19996.880MGP_SPRETEiJ_G0023652Patl19996.879Mus_spretus
ENSCANG00000039197PATL19997.232ENSMPUG00000014607PATL19997.013Mustela_putorius_furo
ENSCANG00000039197PATL19994.156ENSMLUG00000011169PATL19994.156Myotis_lucifugus
ENSCANG00000039197PATL19997.038ENSNGAG00000003682Patl19996.636Nannospalax_galili
ENSCANG00000039197PATL16234.711ENSNBRG00000011745patl25836.277Neolamprologus_brichardi
ENSCANG00000039197PATL15467.308ENSNBRG00000015372patl17444.000Neolamprologus_brichardi
ENSCANG00000039197PATL16335.174ENSNLEG00000005673PATL27535.797Nomascus_leucogenys
ENSCANG00000039197PATL19995.675ENSNLEG00000013081PATL19995.675Nomascus_leucogenys
ENSCANG00000039197PATL16490.968ENSMEUG00000009391PATL17590.968Notamacropus_eugenii
ENSCANG00000039197PATL16896.032ENSOPRG00000007963PATL17996.032Ochotona_princeps
ENSCANG00000039197PATL17390.837ENSODEG00000001792PATL19491.608Octodon_degus
ENSCANG00000039197PATL16266.102ENSONIG00000004170patl19947.539Oreochromis_niloticus
ENSCANG00000039197PATL18731.905ENSONIG00000011519patl25437.055Oreochromis_niloticus
ENSCANG00000039197PATL15136.386ENSOANG00000001538-8437.653Ornithorhynchus_anatinus
ENSCANG00000039197PATL15286.902ENSOANG00000011117-9687.245Ornithorhynchus_anatinus
ENSCANG00000039197PATL19997.920ENSOCUG00000002156PATL19997.659Oryctolagus_cuniculus
ENSCANG00000039197PATL16134.526ENSOCUG00000006339PATL27435.250Oryctolagus_cuniculus
ENSCANG00000039197PATL16433.069ENSORLG00000005780patl26332.475Oryzias_latipes
ENSCANG00000039197PATL16433.465ENSORLG00020016506patl26132.871Oryzias_latipes_hni
ENSCANG00000039197PATL16433.267ENSORLG00015014500patl26332.673Oryzias_latipes_hsok
ENSCANG00000039197PATL18731.918ENSOMEG00000021628patl25736.342Oryzias_melastigma
ENSCANG00000039197PATL19998.440ENSOGAG00000004351PATL19998.440Otolemur_garnettii
ENSCANG00000039197PATL15833.843ENSOGAG00000004709PATL27235.000Otolemur_garnettii
ENSCANG00000039197PATL19996.510ENSOARG00000012005PATL19694.517Ovis_aries
ENSCANG00000039197PATL16135.789ENSOARG00000003762PATL27237.010Ovis_aries
ENSCANG00000039197PATL16335.163ENSPPAG00000007221PATL27335.797Pan_paniscus
ENSCANG00000039197PATL19999.307ENSPPAG00000034275PATL19999.090Pan_paniscus
ENSCANG00000039197PATL19996.859ENSPPRG00000020639PATL110096.471Panthera_pardus
ENSCANG00000039197PATL16234.292ENSPPRG00000004279PATL27335.024Panthera_pardus
ENSCANG00000039197PATL16234.490ENSPTIG00000018964PATL27334.783Panthera_tigris_altaica
ENSCANG00000039197PATL19996.534ENSPTIG00000019298PATL19996.489Panthera_tigris_altaica
ENSCANG00000039197PATL19990.039ENSPTRG00000003697PATL19990.039Pan_troglodytes
ENSCANG00000039197PATL16334.827ENSPTRG00000041536PATL27335.566Pan_troglodytes
ENSCANG00000039197PATL19999.610ENSPANG00000035620PATL19999.610Papio_anubis
ENSCANG00000039197PATL19946.258ENSPKIG00000016224patl19946.994Paramormyrops_kingsleyae
ENSCANG00000039197PATL15437.947ENSPSIG00000017690PATL29537.101Pelodiscus_sinensis
ENSCANG00000039197PATL19983.161ENSPSIG00000016206PATL19682.642Pelodiscus_sinensis
ENSCANG00000039197PATL15935.504ENSPMGG00000014550patl26336.085Periophthalmus_magnuspinnatus
ENSCANG00000039197PATL18460.268ENSPMGG00000002644patl19945.079Periophthalmus_magnuspinnatus
ENSCANG00000039197PATL16234.631ENSPEMG00000016509Patl27036.317Peromyscus_maniculatus_bairdii
ENSCANG00000039197PATL19996.880ENSPEMG00000014215Patl19996.619Peromyscus_maniculatus_bairdii
ENSCANG00000039197PATL19988.946ENSPCIG00000010852PATL19987.938Phascolarctos_cinereus
ENSCANG00000039197PATL16534.127ENSPCIG00000018256PATL27636.139Phascolarctos_cinereus
ENSCANG00000039197PATL18632.891ENSPFOG00000007305patl25436.867Poecilia_formosa
ENSCANG00000039197PATL19945.923ENSPFOG00000007768patl19946.523Poecilia_formosa
ENSCANG00000039197PATL19731.682ENSPLAG00000020713patl25436.867Poecilia_latipinna
ENSCANG00000039197PATL15553.444ENSPLAG00000018465patl17650.076Poecilia_latipinna
ENSCANG00000039197PATL19732.036ENSPMEG00000018942patl25436.867Poecilia_mexicana
ENSCANG00000039197PATL18549.469ENSPMEG00000006555patl17649.924Poecilia_mexicana
ENSCANG00000039197PATL17848.148ENSPREG00000003874patl17049.738Poecilia_reticulata
ENSCANG00000039197PATL19630.175ENSPREG00000023066patl25136.637Poecilia_reticulata
ENSCANG00000039197PATL19999.480ENSPPYG00000003230PATL19999.480Pongo_abelii
ENSCANG00000039197PATL15337.198ENSPCOG00000000295PATL29938.462Propithecus_coquereli
ENSCANG00000039197PATL19997.920ENSPCOG00000020770PATL19997.919Propithecus_coquereli
ENSCANG00000039197PATL18590.854ENSPVAG00000015239PATL110090.396Pteropus_vampyrus
ENSCANG00000039197PATL17852.568ENSPNYG00000018936patl19652.553Pundamilia_nyererei
ENSCANG00000039197PATL16234.504ENSPNYG00000017381patl26136.038Pundamilia_nyererei
ENSCANG00000039197PATL19442.951ENSPNAG00000017907patl18461.667Pygocentrus_nattereri
ENSCANG00000039197PATL16236.192ENSPNAG00000002315patl26335.073Pygocentrus_nattereri
ENSCANG00000039197PATL19996.707ENSRNOG00000021052Patl19996.229Rattus_norvegicus
ENSCANG00000039197PATL19988.806ENSRBIG00000032263PATL19988.806Rhinopithecus_bieti
ENSCANG00000039197PATL19999.740ENSRROG00000032861PATL19999.740Rhinopithecus_roxellana
ENSCANG00000039197PATL19999.220ENSSBOG00000025195PATL19999.220Saimiri_boliviensis_boliviensis
ENSCANG00000039197PATL19989.133ENSSHAG00000004309PATL19988.486Sarcophilus_harrisii
ENSCANG00000039197PATL19944.039ENSSFOG00015009614patl19945.444Scleropages_formosus
ENSCANG00000039197PATL18633.481ENSSFOG00015000720patl25537.500Scleropages_formosus
ENSCANG00000039197PATL19453.750ENSSMAG00000009482patl18153.750Scophthalmus_maximus
ENSCANG00000039197PATL16534.585ENSSMAG00000017262patl26335.351Scophthalmus_maximus
ENSCANG00000039197PATL16235.331ENSSDUG00000022927patl26034.161Seriola_dumerili
ENSCANG00000039197PATL19167.797ENSSDUG00000005362patl17959.155Seriola_dumerili
ENSCANG00000039197PATL19166.102ENSSLDG00000019146patl17957.746Seriola_lalandi_dorsalis
ENSCANG00000039197PATL16834.270ENSSLDG00000017922patl25936.538Seriola_lalandi_dorsalis
ENSCANG00000039197PATL18098.810ENSSARG00000009600PATL18098.810Sorex_araneus
ENSCANG00000039197PATL15136.132ENSSARG00000009047PATL27635.369Sorex_araneus
ENSCANG00000039197PATL19981.299ENSSPUG00000009453PATL19980.519Sphenodon_punctatus
ENSCANG00000039197PATL16134.316ENSSPAG00000004784patl26235.446Stegastes_partitus
ENSCANG00000039197PATL15452.758ENSSPAG00000003187patl19846.287Stegastes_partitus
ENSCANG00000039197PATL19998.084ENSSSCG00000013124PATL19997.273Sus_scrofa
ENSCANG00000039197PATL15138.539ENSTGUG00000004619-9639.447Taeniopygia_guttata
ENSCANG00000039197PATL19980.390ENSTGUG00000006222PATL110079.324Taeniopygia_guttata
ENSCANG00000039197PATL19452.564ENSTRUG00000000709patl19944.663Takifugu_rubripes
ENSCANG00000039197PATL16234.656ENSTRUG00000005647patl25835.566Takifugu_rubripes
ENSCANG00000039197PATL19096.037ENSTBEG00000000796PATL19096.037Tupaia_belangeri
ENSCANG00000039197PATL17297.436ENSTTRG00000009389PATL18497.436Tursiops_truncatus
ENSCANG00000039197PATL16234.356ENSUAMG00000018533PATL27135.024Ursus_americanus
ENSCANG00000039197PATL16234.969ENSUMAG00000007738PATL27135.266Ursus_maritimus
ENSCANG00000039197PATL19997.213ENSUMAG00000018634PATL110096.695Ursus_maritimus
ENSCANG00000039197PATL16597.222ENSVPAG00000009224PATL17697.222Vicugna_pacos
ENSCANG00000039197PATL16435.130ENSVVUG00000011576PATL27236.232Vulpes_vulpes
ENSCANG00000039197PATL19997.552ENSVVUG00000016668PATL110096.839Vulpes_vulpes
ENSCANG00000039197PATL15337.681ENSXETG00000014167patl27535.020Xenopus_tropicalis
ENSCANG00000039197PATL17961.404ENSXCOG00000010808patl19861.404Xiphophorus_couchianus
ENSCANG00000039197PATL16264.407ENSXMAG00000013834patl18455.556Xiphophorus_maculatus

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