EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCANG00000039684 (Gene tree)
Gene ID: 105506476
Gene Symbol: RPUSD4
Alias: FLJ14494
Full Name: RNA pseudouridine synthase D4
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Minus strand
Length: 9482 bases
Position: chrKN979796.1:1833576-1843057
Accession: 105506476
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000032036	PseudoU_synth_2	PF00849.22	1.6e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000055257	RPUSD4-201	2464	XM_011934635	ENSCANP00000032036	377 (aa)	XP_011790025	A0A2K5JT59

Gene Model

Click here to download ENSCANG00000039684's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000039684's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCANG00000039684	RPUSD4	72	30.104	ENSCANG00000040711	RPUSD3	79	30.104

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000039684	RPUSD4	100	90.451	ENSG00000165526	RPUSD4	100	90.451	Homo_sapiens
ENSCANG00000039684	RPUSD4	91	48.870	ENSAPOG00000011024	rpusd4	89	48.870	Acanthochromis_polyacanthus
ENSCANG00000039684	RPUSD4	62	81.452	ENSAMEG00000005953	-	100	81.452	Ailuropoda_melanoleuca
ENSCANG00000039684	RPUSD4	100	80.902	ENSAMEG00000000127	-	100	80.902	Ailuropoda_melanoleuca
ENSCANG00000039684	RPUSD4	86	48.632	ENSACIG00000003533	rpusd4	96	48.632	Amphilophus_citrinellus
ENSCANG00000039684	RPUSD4	90	49.148	ENSAOCG00000015409	rpusd4	87	49.148	Amphiprion_ocellaris
ENSCANG00000039684	RPUSD4	90	49.432	ENSAPEG00000018935	rpusd4	87	49.432	Amphiprion_percula
ENSCANG00000039684	RPUSD4	89	48.235	ENSATEG00000008059	rpusd4	80	49.541	Anabas_testudineus
ENSCANG00000039684	RPUSD4	73	62.007	ENSAPLG00000013250	RPUSD4	99	60.339	Anas_platyrhynchos
ENSCANG00000039684	RPUSD4	88	64.565	ENSACAG00000000189	RPUSD4	91	64.565	Anolis_carolinensis
ENSCANG00000039684	RPUSD4	99	88.172	ENSANAG00000024050	RPUSD4	100	88.172	Aotus_nancymaae
ENSCANG00000039684	RPUSD4	89	50.442	ENSACLG00000020996	rpusd4	86	50.442	Astatotilapia_calliptera
ENSCANG00000039684	RPUSD4	88	48.968	ENSAMXG00000031479	rpusd4	95	48.968	Astyanax_mexicanus
ENSCANG00000039684	RPUSD4	100	76.720	ENSBTAG00000020900	RPUSD4	100	76.720	Bos_taurus
ENSCANG00000039684	RPUSD4	98	88.378	ENSCJAG00000042850	RPUSD4	93	88.378	Callithrix_jacchus
ENSCANG00000039684	RPUSD4	100	78.836	ENSCAFG00000010488	RPUSD4	100	78.836	Canis_familiaris
ENSCANG00000039684	RPUSD4	100	78.836	ENSCAFG00020010621	RPUSD4	100	78.836	Canis_lupus_dingo
ENSCANG00000039684	RPUSD4	100	77.045	ENSCHIG00000009975	RPUSD4	100	77.045	Capra_hircus
ENSCANG00000039684	RPUSD4	100	85.146	ENSTSYG00000008456	RPUSD4	100	85.146	Carlito_syrichta
ENSCANG00000039684	RPUSD4	68	78.682	ENSCAPG00000006040	RPUSD4	100	78.682	Cavia_aperea
ENSCANG00000039684	RPUSD4	100	78.515	ENSCPOG00000014971	RPUSD4	100	78.515	Cavia_porcellus
ENSCANG00000039684	RPUSD4	98	88.949	ENSCCAG00000027838	RPUSD4	99	88.949	Cebus_capucinus
ENSCANG00000039684	RPUSD4	100	95.756	ENSCATG00000041570	RPUSD4	100	95.756	Cercocebus_atys
ENSCANG00000039684	RPUSD4	100	81.698	ENSCLAG00000016553	RPUSD4	100	81.698	Chinchilla_lanigera
ENSCANG00000039684	RPUSD4	100	94.960	ENSCSAG00000002274	RPUSD4	100	94.960	Chlorocebus_sabaeus
ENSCANG00000039684	RPUSD4	75	83.392	ENSCHOG00000010249	RPUSD4	100	83.392	Choloepus_hoffmanni
ENSCANG00000039684	RPUSD4	75	68.531	ENSCPBG00000011175	RPUSD4	99	68.531	Chrysemys_picta_bellii
ENSCANG00000039684	RPUSD4	71	44.245	ENSCSAVG00000000872	-	54	44.245	Ciona_savignyi
ENSCANG00000039684	RPUSD4	100	81.167	ENSCGRG00001024141	Rpusd4	100	81.167	Cricetulus_griseus_chok1gshd
ENSCANG00000039684	RPUSD4	100	81.167	ENSCGRG00000014415	Rpusd4	100	81.167	Cricetulus_griseus_crigri
ENSCANG00000039684	RPUSD4	88	48.521	ENSCVAG00000008761	rpusd4	93	47.253	Cyprinodon_variegatus
ENSCANG00000039684	RPUSD4	89	47.863	ENSCVAG00000000392	rpusd4	99	47.863	Cyprinodon_variegatus
ENSCANG00000039684	RPUSD4	90	46.921	ENSDARG00000012674	rpusd4	95	46.921	Danio_rerio
ENSCANG00000039684	RPUSD4	100	76.923	ENSDNOG00000020026	RPUSD4	100	76.923	Dasypus_novemcinctus
ENSCANG00000039684	RPUSD4	100	78.515	ENSDORG00000016717	Rpusd4	100	78.515	Dipodomys_ordii
ENSCANG00000039684	RPUSD4	98	76.819	ENSETEG00000013953	RPUSD4	98	76.819	Echinops_telfairi
ENSCANG00000039684	RPUSD4	100	80.637	ENSEASG00005022982	RPUSD4	100	80.637	Equus_asinus_asinus
ENSCANG00000039684	RPUSD4	100	80.371	ENSECAG00000000557	RPUSD4	100	80.371	Equus_caballus
ENSCANG00000039684	RPUSD4	80	79.891	ENSEEUG00000014036	RPUSD4	80	79.891	Erinaceus_europaeus
ENSCANG00000039684	RPUSD4	93	50.546	ENSELUG00000008075	rpusd4	96	50.546	Esox_lucius
ENSCANG00000039684	RPUSD4	100	80.371	ENSFCAG00000029789	RPUSD4	100	80.371	Felis_catus
ENSCANG00000039684	RPUSD4	89	56.342	ENSFALG00000005171	RPUSD4	99	56.342	Ficedula_albicollis
ENSCANG00000039684	RPUSD4	100	80.106	ENSFDAG00000014307	RPUSD4	100	80.106	Fukomys_damarensis
ENSCANG00000039684	RPUSD4	89	49.412	ENSFHEG00000004329	rpusd4	87	49.412	Fundulus_heteroclitus
ENSCANG00000039684	RPUSD4	84	50.313	ENSGMOG00000017726	rpusd4	96	49.846	Gadus_morhua
ENSCANG00000039684	RPUSD4	87	57.612	ENSGALG00000024326	RPUSD4	95	57.817	Gallus_gallus
ENSCANG00000039684	RPUSD4	90	46.571	ENSGAFG00000021559	rpusd4	88	46.571	Gambusia_affinis
ENSCANG00000039684	RPUSD4	77	51.178	ENSGACG00000001657	rpusd4	99	49.474	Gasterosteus_aculeatus
ENSCANG00000039684	RPUSD4	94	60.784	ENSGAGG00000000132	RPUSD4	98	60.784	Gopherus_agassizii
ENSCANG00000039684	RPUSD4	100	90.186	ENSGGOG00000016494	RPUSD4	100	90.186	Gorilla_gorilla
ENSCANG00000039684	RPUSD4	89	50.442	ENSHBUG00000022838	rpusd4	86	50.442	Haplochromis_burtoni
ENSCANG00000039684	RPUSD4	100	81.698	ENSHGLG00000002285	RPUSD4	100	81.698	Heterocephalus_glaber_female
ENSCANG00000039684	RPUSD4	100	81.698	ENSHGLG00100006385	RPUSD4	100	81.698	Heterocephalus_glaber_male
ENSCANG00000039684	RPUSD4	89	50.882	ENSHCOG00000006612	rpusd4	85	50.882	Hippocampus_comes
ENSCANG00000039684	RPUSD4	89	49.133	ENSIPUG00000023879	rusd4	89	49.133	Ictalurus_punctatus
ENSCANG00000039684	RPUSD4	97	82.418	ENSSTOG00000025280	RPUSD4	100	82.418	Ictidomys_tridecemlineatus
ENSCANG00000039684	RPUSD4	99	81.720	ENSJJAG00000018673	Rpusd4	100	81.720	Jaculus_jaculus
ENSCANG00000039684	RPUSD4	93	49.020	ENSKMAG00000021805	rpusd4	92	49.020	Kryptolebias_marmoratus
ENSCANG00000039684	RPUSD4	89	47.887	ENSLBEG00000020394	rpusd4	99	47.887	Labrus_bergylta
ENSCANG00000039684	RPUSD4	85	60.802	ENSLACG00000011028	RPUSD4	82	60.802	Latimeria_chalumnae
ENSCANG00000039684	RPUSD4	86	46.037	ENSLOCG00000003124	rpusd4	87	45.732	Lepisosteus_oculatus
ENSCANG00000039684	RPUSD4	100	79.894	ENSLAFG00000005211	RPUSD4	100	79.894	Loxodonta_africana
ENSCANG00000039684	RPUSD4	100	96.021	ENSMFAG00000039513	RPUSD4	100	96.021	Macaca_fascicularis
ENSCANG00000039684	RPUSD4	100	95.491	ENSMMUG00000007933	RPUSD4	100	95.491	Macaca_mulatta
ENSCANG00000039684	RPUSD4	100	95.756	ENSMNEG00000027414	RPUSD4	100	95.756	Macaca_nemestrina
ENSCANG00000039684	RPUSD4	100	95.225	ENSMLEG00000042461	RPUSD4	100	95.225	Mandrillus_leucophaeus
ENSCANG00000039684	RPUSD4	85	49.538	ENSMAMG00000023839	rpusd4	83	49.538	Mastacembelus_armatus
ENSCANG00000039684	RPUSD4	89	50.442	ENSMZEG00005011999	rpusd4	86	50.442	Maylandia_zebra
ENSCANG00000039684	RPUSD4	84	57.500	ENSMGAG00000000840	RPUSD4	99	57.716	Meleagris_gallopavo
ENSCANG00000039684	RPUSD4	100	80.902	ENSMAUG00000010280	Rpusd4	100	80.902	Mesocricetus_auratus
ENSCANG00000039684	RPUSD4	100	81.963	ENSMICG00000015979	RPUSD4	100	81.963	Microcebus_murinus
ENSCANG00000039684	RPUSD4	100	77.719	ENSMOCG00000000661	Rpusd4	100	77.719	Microtus_ochrogaster
ENSCANG00000039684	RPUSD4	79	51.485	ENSMMOG00000021731	rpusd4	90	51.485	Mola_mola
ENSCANG00000039684	RPUSD4	85	74.608	ENSMODG00000004521	RPUSD4	82	74.608	Monodelphis_domestica
ENSCANG00000039684	RPUSD4	79	50.825	ENSMALG00000005839	rpusd4	91	50.825	Monopterus_albus
ENSCANG00000039684	RPUSD4	100	79.310	MGP_CAROLIEiJ_G0031954	Rpusd4	100	79.310	Mus_caroli
ENSCANG00000039684	RPUSD4	100	79.045	ENSMUSG00000032044	Rpusd4	100	79.045	Mus_musculus
ENSCANG00000039684	RPUSD4	100	79.841	MGP_PahariEiJ_G0014819	Rpusd4	100	79.841	Mus_pahari
ENSCANG00000039684	RPUSD4	100	79.045	MGP_SPRETEiJ_G0033078	Rpusd4	100	79.045	Mus_spretus
ENSCANG00000039684	RPUSD4	98	78.706	ENSMPUG00000006608	RPUSD4	99	78.706	Mustela_putorius_furo
ENSCANG00000039684	RPUSD4	98	79.133	ENSMLUG00000017328	-	97	79.133	Myotis_lucifugus
ENSCANG00000039684	RPUSD4	67	83.858	ENSMLUG00000029348	-	100	83.858	Myotis_lucifugus
ENSCANG00000039684	RPUSD4	98	78.437	ENSNGAG00000020847	Rpusd4	98	78.437	Nannospalax_galili
ENSCANG00000039684	RPUSD4	86	51.368	ENSNBRG00000005207	rpusd4	95	51.368	Neolamprologus_brichardi
ENSCANG00000039684	RPUSD4	100	90.981	ENSNLEG00000007465	RPUSD4	100	90.981	Nomascus_leucogenys
ENSCANG00000039684	RPUSD4	98	68.919	ENSMEUG00000004370	RPUSD4	99	68.919	Notamacropus_eugenii
ENSCANG00000039684	RPUSD4	70	58.491	ENSOPRG00000013141	-	100	58.491	Ochotona_princeps
ENSCANG00000039684	RPUSD4	100	80.106	ENSODEG00000004577	RPUSD4	100	80.106	Octodon_degus
ENSCANG00000039684	RPUSD4	92	49.008	ENSONIG00000018879	rpusd4	95	49.008	Oreochromis_niloticus
ENSCANG00000039684	RPUSD4	77	68.814	ENSOANG00000007247	RPUSD4	95	68.687	Ornithorhynchus_anatinus
ENSCANG00000039684	RPUSD4	98	81.622	ENSOCUG00000017039	RPUSD4	98	81.622	Oryctolagus_cuniculus
ENSCANG00000039684	RPUSD4	91	47.414	ENSORLG00000002750	rpusd4	95	47.414	Oryzias_latipes
ENSCANG00000039684	RPUSD4	80	50.492	ENSORLG00020002044	rpusd4	75	50.492	Oryzias_latipes_hni
ENSCANG00000039684	RPUSD4	86	49.096	ENSORLG00015020034	rpusd4	81	49.096	Oryzias_latipes_hsok
ENSCANG00000039684	RPUSD4	88	49.555	ENSOMEG00000004861	rpusd4	82	49.555	Oryzias_melastigma
ENSCANG00000039684	RPUSD4	100	79.630	ENSOGAG00000008922	RPUSD4	100	79.630	Otolemur_garnettii
ENSCANG00000039684	RPUSD4	98	77.838	ENSOARG00000012238	RPUSD4	97	77.838	Ovis_aries
ENSCANG00000039684	RPUSD4	100	90.716	ENSPPAG00000042883	RPUSD4	93	90.716	Pan_paniscus
ENSCANG00000039684	RPUSD4	100	80.371	ENSPPRG00000003081	RPUSD4	100	80.371	Panthera_pardus
ENSCANG00000039684	RPUSD4	100	80.371	ENSPTIG00000012059	RPUSD4	100	80.371	Panthera_tigris_altaica
ENSCANG00000039684	RPUSD4	100	90.451	ENSPTRG00000004454	RPUSD4	100	90.451	Pan_troglodytes
ENSCANG00000039684	RPUSD4	100	96.021	ENSPANG00000015040	RPUSD4	100	96.021	Papio_anubis
ENSCANG00000039684	RPUSD4	89	56.509	ENSPKIG00000023986	rpusd4	86	56.509	Paramormyrops_kingsleyae
ENSCANG00000039684	RPUSD4	79	67.450	ENSPSIG00000014268	RPUSD4	95	67.450	Pelodiscus_sinensis
ENSCANG00000039684	RPUSD4	95	45.730	ENSPMGG00000002806	rpusd4	91	47.866	Periophthalmus_magnuspinnatus
ENSCANG00000039684	RPUSD4	100	72.149	ENSPEMG00000000278	Rpusd4	100	72.149	Peromyscus_maniculatus_bairdii
ENSCANG00000039684	RPUSD4	81	44.379	ENSPMAG00000008183	rpusd4	98	44.379	Petromyzon_marinus
ENSCANG00000039684	RPUSD4	95	71.148	ENSPCIG00000010212	RPUSD4	98	71.148	Phascolarctos_cinereus
ENSCANG00000039684	RPUSD4	90	48.732	ENSPFOG00000019030	rpusd4	91	48.732	Poecilia_formosa
ENSCANG00000039684	RPUSD4	90	49.292	ENSPLAG00000016848	rpusd4	81	51.070	Poecilia_latipinna
ENSCANG00000039684	RPUSD4	90	48.442	ENSPMEG00000017534	rpusd4	88	48.442	Poecilia_mexicana
ENSCANG00000039684	RPUSD4	84	50.152	ENSPREG00000005689	rpusd4	84	50.152	Poecilia_reticulata
ENSCANG00000039684	RPUSD4	100	91.247	ENSPPYG00000004043	RPUSD4	100	91.247	Pongo_abelii
ENSCANG00000039684	RPUSD4	80	82.609	ENSPCAG00000000753	RPUSD4	81	82.609	Procavia_capensis
ENSCANG00000039684	RPUSD4	98	76.011	ENSPCOG00000020694	RPUSD4	100	76.011	Propithecus_coquereli
ENSCANG00000039684	RPUSD4	97	82.289	ENSPVAG00000000988	RPUSD4	98	82.289	Pteropus_vampyrus
ENSCANG00000039684	RPUSD4	89	49.558	ENSPNYG00000009652	rpusd4	86	49.558	Pundamilia_nyererei
ENSCANG00000039684	RPUSD4	96	48.219	ENSPNAG00000012264	rpusd4	95	48.219	Pygocentrus_nattereri
ENSCANG00000039684	RPUSD4	100	79.310	ENSRNOG00000011567	Rpusd4	100	79.310	Rattus_norvegicus
ENSCANG00000039684	RPUSD4	100	97.878	ENSRBIG00000034842	RPUSD4	100	97.878	Rhinopithecus_bieti
ENSCANG00000039684	RPUSD4	100	97.878	ENSRROG00000039753	RPUSD4	100	97.878	Rhinopithecus_roxellana
ENSCANG00000039684	RPUSD4	99	87.097	ENSSBOG00000030413	RPUSD4	100	87.097	Saimiri_boliviensis_boliviensis
ENSCANG00000039684	RPUSD4	80	75.748	ENSSHAG00000008304	RPUSD4	99	75.748	Sarcophilus_harrisii
ENSCANG00000039684	RPUSD4	90	53.757	ENSSFOG00015006203	rpusd4	93	54.335	Scleropages_formosus
ENSCANG00000039684	RPUSD4	91	47.839	ENSSMAG00000020978	rpusd4	90	47.839	Scophthalmus_maximus
ENSCANG00000039684	RPUSD4	85	49.074	ENSSDUG00000013399	rpusd4	84	49.226	Seriola_dumerili
ENSCANG00000039684	RPUSD4	84	48.916	ENSSLDG00000023507	rpusd4	84	48.916	Seriola_lalandi_dorsalis
ENSCANG00000039684	RPUSD4	91	60.116	ENSSPUG00000001401	RPUSD4	93	61.243	Sphenodon_punctatus
ENSCANG00000039684	RPUSD4	86	50.755	ENSSPAG00000012163	rpusd4	85	50.755	Stegastes_partitus
ENSCANG00000039684	RPUSD4	100	79.310	ENSSSCG00000015233	RPUSD4	100	79.310	Sus_scrofa
ENSCANG00000039684	RPUSD4	78	60.269	ENSTGUG00000000773	RPUSD4	99	60.269	Taeniopygia_guttata
ENSCANG00000039684	RPUSD4	86	50.000	ENSTRUG00000012283	rpusd4	85	49.254	Takifugu_rubripes
ENSCANG00000039684	RPUSD4	94	46.301	ENSTNIG00000014676	rpusd4	93	46.301	Tetraodon_nigroviridis
ENSCANG00000039684	RPUSD4	100	79.045	ENSTTRG00000001555	RPUSD4	100	79.045	Tursiops_truncatus
ENSCANG00000039684	RPUSD4	100	80.371	ENSUMAG00000002219	RPUSD4	100	80.371	Ursus_maritimus
ENSCANG00000039684	RPUSD4	70	78.868	ENSVPAG00000001066	RPUSD4	100	78.868	Vicugna_pacos
ENSCANG00000039684	RPUSD4	100	78.571	ENSVVUG00000020101	RPUSD4	100	78.571	Vulpes_vulpes
ENSCANG00000039684	RPUSD4	89	48.116	ENSXCOG00000004676	rpusd4	89	47.826	Xiphophorus_couchianus
ENSCANG00000039684	RPUSD4	97	45.867	ENSXMAG00000023351	rpusd4	95	45.867	Xiphophorus_maculatus