EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCANG00000040106 (Gene tree)
Gene ID: 105506894
Gene Symbol: RTCA
Alias: RPC|RTC1|RTCD1
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Plus strand
Length: 25384 bases
Position: chrKN979841.1:648593-673976
Accession: 105506894
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000032875	RTC	PF01137.21	5.1e-87	1	1
ENSCANP00000032884	RTC	PF01137.21	2.9e-81	1	1
ENSCANP00000032875	RTC_insert	PF05189.13	1.9e-24	1	1
ENSCANP00000032884	RTC_insert	PF05189.13	2e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000056110	RTCA-202	1140	XM_011935177	ENSCANP00000032884	379 (aa)	XP_011790567	A0A2K5JVJ3
ENSCANT00000056101	RTCA-201	2561	XM_011935178	ENSCANP00000032875	366 (aa)	XP_011790568	A0A2K5JVQ1

Gene Model

Click here to download ENSCANG00000040106's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000040106's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000040106	RTCA	100	98.681	ENSG00000137996	RTCA	100	100.000	Homo_sapiens
ENSCANG00000040106	RTCA	99	72.022	ENSAPOG00000001345	rtca	98	72.022	Acanthochromis_polyacanthus
ENSCANG00000040106	RTCA	73	94.424	ENSAMEG00000008855	RTCA	100	94.424	Ailuropoda_melanoleuca
ENSCANG00000040106	RTCA	99	71.745	ENSACIG00000019643	rtca	99	71.745	Amphilophus_citrinellus
ENSCANG00000040106	RTCA	100	70.765	ENSAOCG00000014979	rtca	99	70.765	Amphiprion_ocellaris
ENSCANG00000040106	RTCA	100	70.765	ENSAPEG00000006945	rtca	99	70.765	Amphiprion_percula
ENSCANG00000040106	RTCA	96	71.510	ENSATEG00000006315	rtca	96	71.510	Anabas_testudineus
ENSCANG00000040106	RTCA	96	80.226	ENSAPLG00000015430	RTCA	100	80.226	Anas_platyrhynchos
ENSCANG00000040106	RTCA	100	97.268	ENSANAG00000025446	RTCA	100	97.268	Aotus_nancymaae
ENSCANG00000040106	RTCA	100	69.945	ENSACLG00000020770	rtca	99	69.945	Astatotilapia_calliptera
ENSCANG00000040106	RTCA	100	72.678	ENSAMXG00000043271	rtca	100	72.678	Astyanax_mexicanus
ENSCANG00000040106	RTCA	100	95.628	ENSBTAG00000006321	RTCA	100	95.628	Bos_taurus
ENSCANG00000040106	RTCA	100	97.814	ENSCJAG00000003398	RTCA	100	97.814	Callithrix_jacchus
ENSCANG00000040106	RTCA	100	95.082	ENSCAFG00000020010	RTCA	68	95.082	Canis_familiaris
ENSCANG00000040106	RTCA	100	95.082	ENSCAFG00020011528	RTCA	57	95.082	Canis_lupus_dingo
ENSCANG00000040106	RTCA	100	95.355	ENSCHIG00000018937	RTCA	100	95.355	Capra_hircus
ENSCANG00000040106	RTCA	100	92.896	ENSTSYG00000011305	RTCA	100	92.896	Carlito_syrichta
ENSCANG00000040106	RTCA	100	97.541	ENSCCAG00000021844	RTCA	100	97.541	Cebus_capucinus
ENSCANG00000040106	RTCA	100	99.472	ENSCATG00000019364	RTCA	100	99.472	Cercocebus_atys
ENSCANG00000040106	RTCA	87	95.899	ENSCLAG00000006125	RTCA	100	95.899	Chinchilla_lanigera
ENSCANG00000040106	RTCA	100	99.727	ENSCSAG00000001509	RTCA	100	99.727	Chlorocebus_sabaeus
ENSCANG00000040106	RTCA	100	93.443	ENSCHOG00000005211	RTCA	100	93.443	Choloepus_hoffmanni
ENSCANG00000040106	RTCA	100	83.060	ENSCPBG00000026658	RTCA	100	83.060	Chrysemys_picta_bellii
ENSCANG00000040106	RTCA	98	55.956	ENSCING00000007875	-	98	55.956	Ciona_intestinalis
ENSCANG00000040106	RTCA	98	54.444	ENSCSAVG00000007269	-	98	54.444	Ciona_savignyi
ENSCANG00000040106	RTCA	73	91.078	ENSCGRG00001013163	Rtca	85	91.078	Cricetulus_griseus_chok1gshd
ENSCANG00000040106	RTCA	99	69.041	ENSCSEG00000000530	rtca	98	69.041	Cynoglossus_semilaevis
ENSCANG00000040106	RTCA	100	59.290	ENSCVAG00000021809	rtca	100	59.290	Cyprinodon_variegatus
ENSCANG00000040106	RTCA	100	73.497	ENSDARG00000002215	rtca	100	73.497	Danio_rerio
ENSCANG00000040106	RTCA	100	93.989	ENSDNOG00000000456	RTCA	100	93.989	Dasypus_novemcinctus
ENSCANG00000040106	RTCA	100	92.350	ENSDORG00000005448	Rtca	100	92.350	Dipodomys_ordii
ENSCANG00000040106	RTCA	98	38.547	FBgn0025630	Rtca	98	38.547	Drosophila_melanogaster
ENSCANG00000040106	RTCA	95	54.520	ENSEBUG00000008556	rtca	97	54.520	Eptatretus_burgeri
ENSCANG00000040106	RTCA	100	94.536	ENSEASG00005015926	RTCA	100	94.536	Equus_asinus_asinus
ENSCANG00000040106	RTCA	100	94.536	ENSECAG00000019831	RTCA	100	94.536	Equus_caballus
ENSCANG00000040106	RTCA	91	82.948	ENSEEUG00000001165	RTCA	100	82.948	Erinaceus_europaeus
ENSCANG00000040106	RTCA	99	72.022	ENSELUG00000003741	rtca	99	72.022	Esox_lucius
ENSCANG00000040106	RTCA	100	95.082	ENSFCAG00000024460	RTCA	100	95.082	Felis_catus
ENSCANG00000040106	RTCA	91	83.784	ENSFALG00000002443	RTCA	90	83.784	Ficedula_albicollis
ENSCANG00000040106	RTCA	100	95.628	ENSFDAG00000012070	-	100	95.628	Fukomys_damarensis
ENSCANG00000040106	RTCA	98	74.862	ENSFDAG00000016084	-	100	74.862	Fukomys_damarensis
ENSCANG00000040106	RTCA	59	70.233	ENSFHEG00000002868	rtca	96	68.142	Fundulus_heteroclitus
ENSCANG00000040106	RTCA	100	68.579	ENSGMOG00000013264	rtca	100	68.579	Gadus_morhua
ENSCANG00000040106	RTCA	100	83.060	ENSGALG00000005277	RTCA	100	83.060	Gallus_gallus
ENSCANG00000040106	RTCA	100	71.311	ENSGAFG00000011853	rtca	99	71.311	Gambusia_affinis
ENSCANG00000040106	RTCA	100	69.126	ENSGACG00000013497	rtca	100	69.126	Gasterosteus_aculeatus
ENSCANG00000040106	RTCA	80	83.959	ENSGAGG00000023306	RTCA	100	83.959	Gopherus_agassizii
ENSCANG00000040106	RTCA	100	97.814	ENSGGOG00000044018	-	100	97.814	Gorilla_gorilla
ENSCANG00000040106	RTCA	100	98.681	ENSGGOG00000009546	-	100	98.681	Gorilla_gorilla
ENSCANG00000040106	RTCA	100	69.672	ENSHBUG00000002114	rtca	99	69.672	Haplochromis_burtoni
ENSCANG00000040106	RTCA	100	94.809	ENSHGLG00000002617	RTCA	100	94.809	Heterocephalus_glaber_female
ENSCANG00000040106	RTCA	100	94.809	ENSHGLG00100006056	RTCA	100	94.809	Heterocephalus_glaber_male
ENSCANG00000040106	RTCA	100	64.754	ENSHCOG00000020628	rtca	89	64.754	Hippocampus_comes
ENSCANG00000040106	RTCA	100	72.951	ENSIPUG00000024803	rtca	100	72.951	Ictalurus_punctatus
ENSCANG00000040106	RTCA	100	83.106	ENSSTOG00000033099	-	100	83.106	Ictidomys_tridecemlineatus
ENSCANG00000040106	RTCA	100	88.251	ENSSTOG00000013528	-	100	88.251	Ictidomys_tridecemlineatus
ENSCANG00000040106	RTCA	100	66.940	ENSJJAG00000016178	Rtca	100	66.940	Jaculus_jaculus
ENSCANG00000040106	RTCA	99	71.745	ENSKMAG00000006651	rtca	98	71.745	Kryptolebias_marmoratus
ENSCANG00000040106	RTCA	88	68.224	ENSLBEG00000002448	-	99	68.224	Labrus_bergylta
ENSCANG00000040106	RTCA	99	68.975	ENSLBEG00000028971	rtca	99	68.975	Labrus_bergylta
ENSCANG00000040106	RTCA	100	78.415	ENSLACG00000013666	RTCA	100	78.415	Latimeria_chalumnae
ENSCANG00000040106	RTCA	100	72.678	ENSLOCG00000000093	rtca	99	72.678	Lepisosteus_oculatus
ENSCANG00000040106	RTCA	100	93.169	ENSLAFG00000001473	RTCA	100	93.169	Loxodonta_africana
ENSCANG00000040106	RTCA	100	99.736	ENSMFAG00000034132	RTCA	100	99.736	Macaca_fascicularis
ENSCANG00000040106	RTCA	100	99.208	ENSMMUG00000019105	RTCA	100	99.208	Macaca_mulatta
ENSCANG00000040106	RTCA	84	99.676	ENSMNEG00000037163	RTCA	100	99.676	Macaca_nemestrina
ENSCANG00000040106	RTCA	100	82.058	ENSMLEG00000042151	RTCA	100	82.058	Mandrillus_leucophaeus
ENSCANG00000040106	RTCA	100	72.951	ENSMAMG00000016536	rtca	100	72.951	Mastacembelus_armatus
ENSCANG00000040106	RTCA	100	69.945	ENSMZEG00005017945	rtca	99	69.945	Maylandia_zebra
ENSCANG00000040106	RTCA	87	81.505	ENSMGAG00000006892	RTCA	100	80.938	Meleagris_gallopavo
ENSCANG00000040106	RTCA	100	91.803	ENSMAUG00000008488	Rtca	100	91.803	Mesocricetus_auratus
ENSCANG00000040106	RTCA	84	96.117	ENSMICG00000008643	RTCA	100	96.117	Microcebus_murinus
ENSCANG00000040106	RTCA	100	92.077	ENSMOCG00000016660	Rtca	100	92.077	Microtus_ochrogaster
ENSCANG00000040106	RTCA	84	71.197	ENSMMOG00000007750	rtca	100	71.197	Mola_mola
ENSCANG00000040106	RTCA	100	90.164	ENSMODG00000003557	RTCA	100	90.164	Monodelphis_domestica
ENSCANG00000040106	RTCA	100	72.404	ENSMALG00000020844	rtca	100	72.404	Monopterus_albus
ENSCANG00000040106	RTCA	100	91.257	MGP_CAROLIEiJ_G0025565	Rtca	100	91.257	Mus_caroli
ENSCANG00000040106	RTCA	100	90.710	ENSMUSG00000000339	Rtca	100	90.710	Mus_musculus
ENSCANG00000040106	RTCA	100	90.984	MGP_PahariEiJ_G0027011	Rtca	100	90.984	Mus_pahari
ENSCANG00000040106	RTCA	100	90.984	MGP_SPRETEiJ_G0026515	Rtca	100	90.984	Mus_spretus
ENSCANG00000040106	RTCA	100	95.355	ENSMPUG00000012119	RTCA	100	95.355	Mustela_putorius_furo
ENSCANG00000040106	RTCA	100	87.466	ENSMLUG00000009922	RTCA	100	87.466	Myotis_lucifugus
ENSCANG00000040106	RTCA	100	91.803	ENSNGAG00000011540	Rtca	99	91.803	Nannospalax_galili
ENSCANG00000040106	RTCA	100	69.945	ENSNBRG00000003062	rtca	99	69.945	Neolamprologus_brichardi
ENSCANG00000040106	RTCA	100	98.681	ENSNLEG00000031426	RTCA	100	98.681	Nomascus_leucogenys
ENSCANG00000040106	RTCA	77	75.758	ENSMEUG00000010030	-	77	75.758	Notamacropus_eugenii
ENSCANG00000040106	RTCA	73	87.732	ENSOPRG00000012092	RTCA	71	87.732	Ochotona_princeps
ENSCANG00000040106	RTCA	95	94.828	ENSODEG00000006990	RTCA	96	94.872	Octodon_degus
ENSCANG00000040106	RTCA	100	69.945	ENSONIG00000007753	rtca	99	69.945	Oreochromis_niloticus
ENSCANG00000040106	RTCA	87	87.697	ENSOANG00000012055	RTCA	98	87.697	Ornithorhynchus_anatinus
ENSCANG00000040106	RTCA	100	95.628	ENSOCUG00000014247	RTCA	100	95.628	Oryctolagus_cuniculus
ENSCANG00000040106	RTCA	100	70.219	ENSORLG00000013605	rtca	100	70.219	Oryzias_latipes
ENSCANG00000040106	RTCA	100	70.219	ENSORLG00020001904	rtca	100	70.219	Oryzias_latipes_hni
ENSCANG00000040106	RTCA	100	70.219	ENSORLG00015021064	rtca	100	70.219	Oryzias_latipes_hsok
ENSCANG00000040106	RTCA	100	71.038	ENSOMEG00000000756	rtca	100	71.038	Oryzias_melastigma
ENSCANG00000040106	RTCA	100	85.519	ENSOGAG00000005627	RTCA	100	85.519	Otolemur_garnettii
ENSCANG00000040106	RTCA	87	94.340	ENSOARG00000018122	RTCA	100	94.340	Ovis_aries
ENSCANG00000040106	RTCA	100	98.153	ENSPPAG00000035119	RTCA	100	98.153	Pan_paniscus
ENSCANG00000040106	RTCA	100	95.082	ENSPPRG00000000350	RTCA	100	95.082	Panthera_pardus
ENSCANG00000040106	RTCA	100	94.809	ENSPTIG00000012816	RTCA	100	94.809	Panthera_tigris_altaica
ENSCANG00000040106	RTCA	100	98.153	ENSPTRG00000001004	RTCA	100	98.153	Pan_troglodytes
ENSCANG00000040106	RTCA	100	98.907	ENSPANG00000000346	RTCA	100	98.907	Papio_anubis
ENSCANG00000040106	RTCA	100	74.044	ENSPKIG00000001653	rtca	100	74.044	Paramormyrops_kingsleyae
ENSCANG00000040106	RTCA	100	83.607	ENSPSIG00000011408	RTCA	100	83.607	Pelodiscus_sinensis
ENSCANG00000040106	RTCA	100	91.257	ENSPEMG00000018582	Rtca	100	91.257	Peromyscus_maniculatus_bairdii
ENSCANG00000040106	RTCA	100	58.856	ENSPMAG00000009110	rtca	100	58.856	Petromyzon_marinus
ENSCANG00000040106	RTCA	100	90.437	ENSPCIG00000007684	RTCA	100	90.437	Phascolarctos_cinereus
ENSCANG00000040106	RTCA	100	71.662	ENSPFOG00000004824	rtca	100	71.662	Poecilia_formosa
ENSCANG00000040106	RTCA	100	71.858	ENSPLAG00000011753	rtca	99	71.858	Poecilia_latipinna
ENSCANG00000040106	RTCA	100	71.858	ENSPMEG00000020469	rtca	99	71.858	Poecilia_mexicana
ENSCANG00000040106	RTCA	100	72.678	ENSPREG00000001365	rtca	99	72.678	Poecilia_reticulata
ENSCANG00000040106	RTCA	100	98.634	ENSPPYG00000001115	RTCA	100	98.634	Pongo_abelii
ENSCANG00000040106	RTCA	100	90.710	ENSPCAG00000005076	RTCA	100	90.710	Procavia_capensis
ENSCANG00000040106	RTCA	100	96.721	ENSPCOG00000005603	RTCA	100	96.721	Propithecus_coquereli
ENSCANG00000040106	RTCA	100	93.140	ENSPVAG00000009478	RTCA	100	93.140	Pteropus_vampyrus
ENSCANG00000040106	RTCA	100	69.945	ENSPNYG00000004722	rtca	99	69.945	Pundamilia_nyererei
ENSCANG00000040106	RTCA	100	72.678	ENSPNAG00000022270	rtca	100	72.678	Pygocentrus_nattereri
ENSCANG00000040106	RTCA	100	91.257	ENSRNOG00000014575	Rtca	100	91.257	Rattus_norvegicus
ENSCANG00000040106	RTCA	100	99.472	ENSRBIG00000041180	RTCA	100	99.472	Rhinopithecus_bieti
ENSCANG00000040106	RTCA	100	99.472	ENSRROG00000024929	RTCA	100	99.472	Rhinopithecus_roxellana
ENSCANG00000040106	RTCA	100	96.995	ENSSBOG00000028626	RTCA	100	96.995	Saimiri_boliviensis_boliviensis
ENSCANG00000040106	RTCA	100	90.164	ENSSHAG00000001758	RTCA	100	90.164	Sarcophilus_harrisii
ENSCANG00000040106	RTCA	98	68.889	ENSSMAG00000014680	rtca	97	68.889	Scophthalmus_maximus
ENSCANG00000040106	RTCA	98	71.389	ENSSDUG00000015585	rtca	97	71.389	Seriola_dumerili
ENSCANG00000040106	RTCA	96	71.510	ENSSLDG00000018985	rtca	95	71.510	Seriola_lalandi_dorsalis
ENSCANG00000040106	RTCA	87	85.804	ENSSARG00000013993	RTCA	100	85.804	Sorex_araneus
ENSCANG00000040106	RTCA	100	70.219	ENSSPAG00000011938	rtca	99	70.219	Stegastes_partitus
ENSCANG00000040106	RTCA	100	94.809	ENSSSCG00000006865	RTCA	100	94.809	Sus_scrofa
ENSCANG00000040106	RTCA	100	83.333	ENSTGUG00000005154	RTCA	100	83.333	Taeniopygia_guttata
ENSCANG00000040106	RTCA	100	70.765	ENSTRUG00000008799	rtca	100	70.765	Takifugu_rubripes
ENSCANG00000040106	RTCA	100	71.585	ENSTNIG00000004725	rtca	100	71.585	Tetraodon_nigroviridis
ENSCANG00000040106	RTCA	60	90.000	ENSTBEG00000000943	RTCA	82	68.067	Tupaia_belangeri
ENSCANG00000040106	RTCA	100	93.931	ENSTTRG00000015327	RTCA	100	93.931	Tursiops_truncatus
ENSCANG00000040106	RTCA	94	92.128	ENSUAMG00000017265	RTCA	96	92.128	Ursus_americanus
ENSCANG00000040106	RTCA	100	94.262	ENSUMAG00000007881	RTCA	100	94.262	Ursus_maritimus
ENSCANG00000040106	RTCA	87	85.174	ENSVPAG00000001039	RTCA	87	85.152	Vicugna_pacos
ENSCANG00000040106	RTCA	100	94.809	ENSVVUG00000022041	RTCA	68	94.809	Vulpes_vulpes
ENSCANG00000040106	RTCA	99	64.850	ENSXETG00000031661	RTCA	99	64.850	Xenopus_tropicalis
ENSCANG00000040106	RTCA	100	62.295	ENSXCOG00000008002	rtca	100	62.295	Xiphophorus_couchianus
ENSCANG00000040106	RTCA	100	71.585	ENSXMAG00000005482	rtca	99	71.585	Xiphophorus_maculatus