EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCANG00000040396 (Gene tree)
Gene ID: 105506216
Gene Symbol: UPF2
Alias: DKFZP434D222|KIAA1408|RENT2|smg-3
Full Name: UPF2%2C regulator of nonsense mediated mRNA decay
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Minus strand
Length: 133762 bases
Position: chrKN979752.1:452697-586458
Accession: 105506216
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000033476	Upf2	PF04050.14	6.7e-17	1	1
ENSCANP00000033476	MIF4G	PF02854.19	1.4e-80	1	3
ENSCANP00000033476	MIF4G	PF02854.19	1.4e-80	2	3
ENSCANP00000033476	MIF4G	PF02854.19	1.4e-80	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000056703	UPF2-201	3732	XM_011934286	ENSCANP00000033476	1243 (aa)	XP_011789676	A0A2K5JX91

Gene Model

Click here to download ENSCANG00000040396's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000040396's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000040396	UPF2	100	93.863	ENSG00000151461	UPF2	99	93.203	Homo_sapiens
ENSCANG00000040396	UPF2	100	73.643	ENSAPOG00000015837	UPF2	100	74.744	Acanthochromis_polyacanthus
ENSCANG00000040396	UPF2	100	92.368	ENSAMEG00000004586	UPF2	99	91.719	Ailuropoda_melanoleuca
ENSCANG00000040396	UPF2	100	77.769	ENSACIG00000018078	UPF2	100	77.382	Amphilophus_citrinellus
ENSCANG00000040396	UPF2	100	77.847	ENSAOCG00000016766	UPF2	100	77.183	Amphiprion_ocellaris
ENSCANG00000040396	UPF2	100	77.925	ENSAPEG00000019084	UPF2	100	77.262	Amphiprion_percula
ENSCANG00000040396	UPF2	100	77.683	ENSATEG00000021677	UPF2	99	77.572	Anabas_testudineus
ENSCANG00000040396	UPF2	100	82.819	ENSAPLG00000010287	UPF2	99	82.873	Anas_platyrhynchos
ENSCANG00000040396	UPF2	100	86.389	ENSACAG00000009259	UPF2	99	86.016	Anolis_carolinensis
ENSCANG00000040396	UPF2	100	83.189	ENSANAG00000028451	UPF2	99	81.279	Aotus_nancymaae
ENSCANG00000040396	UPF2	100	76.209	ENSACLG00000012696	UPF2	99	77.614	Astatotilapia_calliptera
ENSCANG00000040396	UPF2	100	78.030	ENSAMXG00000013700	UPF2	99	77.717	Astyanax_mexicanus
ENSCANG00000040396	UPF2	100	92.054	ENSBTAG00000000288	UPF2	99	91.406	Bos_taurus
ENSCANG00000040396	UPF2	100	93.824	ENSCJAG00000020685	UPF2	99	93.666	Callithrix_jacchus
ENSCANG00000040396	UPF2	100	92.132	ENSCAFG00000004839	UPF2	99	91.484	Canis_familiaris
ENSCANG00000040396	UPF2	100	93.191	ENSCAFG00020005882	UPF2	98	97.134	Canis_lupus_dingo
ENSCANG00000040396	UPF2	100	92.132	ENSCHIG00000020359	UPF2	99	91.484	Capra_hircus
ENSCANG00000040396	UPF2	100	92.716	ENSTSYG00000000935	UPF2	100	92.716	Carlito_syrichta
ENSCANG00000040396	UPF2	91	85.153	ENSCAPG00000016658	UPF2	100	83.635	Cavia_aperea
ENSCANG00000040396	UPF2	99	88.519	ENSCPOG00000008809	UPF2	99	88.679	Cavia_porcellus
ENSCANG00000040396	UPF2	100	87.826	ENSCCAG00000035991	UPF2	99	89.669	Cebus_capucinus
ENSCANG00000040396	UPF2	100	96.754	ENSCATG00000032679	UPF2	100	96.754	Cercocebus_atys
ENSCANG00000040396	UPF2	100	90.165	ENSCLAG00000011434	UPF2	99	90.312	Chinchilla_lanigera
ENSCANG00000040396	UPF2	100	94.178	ENSCSAG00000013372	UPF2	99	93.516	Chlorocebus_sabaeus
ENSCANG00000040396	UPF2	87	99.554	ENSCHOG00000000422	UPF2	89	99.554	Choloepus_hoffmanni
ENSCANG00000040396	UPF2	100	87.173	ENSCPBG00000027823	UPF2	100	87.094	Chrysemys_picta_bellii
ENSCANG00000040396	UPF2	78	47.244	ENSCSAVG00000007772	-	79	50.318	Ciona_savignyi
ENSCANG00000040396	UPF2	100	91.243	ENSCGRG00001019347	Upf2	99	91.478	Cricetulus_griseus_chok1gshd
ENSCANG00000040396	UPF2	100	91.243	ENSCGRG00000017993	Upf2	99	91.478	Cricetulus_griseus_crigri
ENSCANG00000040396	UPF2	91	74.676	ENSCSEG00000003520	UPF2	99	72.684	Cynoglossus_semilaevis
ENSCANG00000040396	UPF2	99	77.376	ENSCVAG00000006167	UPF2	100	76.833	Cyprinodon_variegatus
ENSCANG00000040396	UPF2	100	92.211	ENSDNOG00000018160	UPF2	99	91.562	Dasypus_novemcinctus
ENSCANG00000040396	UPF2	100	91.654	ENSDORG00000002478	Upf2	99	91.009	Dipodomys_ordii
ENSCANG00000040396	UPF2	88	34.938	FBgn0029992	Upf2	73	39.457	Drosophila_melanogaster
ENSCANG00000040396	UPF2	65	100.000	ENSETEG00000011583	-	63	100.000	Echinops_telfairi
ENSCANG00000040396	UPF2	64	68.507	ENSEBUG00000012448	-	87	68.507	Eptatretus_burgeri
ENSCANG00000040396	UPF2	100	90.480	ENSEASG00005019274	UPF2	99	96.737	Equus_asinus_asinus
ENSCANG00000040396	UPF2	100	90.795	ENSECAG00000017022	UPF2	99	90.938	Equus_caballus
ENSCANG00000040396	UPF2	81	80.357	ENSEEUG00000007819	UPF2	82	80.769	Erinaceus_europaeus
ENSCANG00000040396	UPF2	100	76.659	ENSELUG00000012014	UPF2	99	76.561	Esox_lucius
ENSCANG00000040396	UPF2	98	97.164	ENSFCAG00000005785	UPF2	99	91.406	Felis_catus
ENSCANG00000040396	UPF2	100	85.838	ENSFALG00000001889	UPF2	98	87.031	Ficedula_albicollis
ENSCANG00000040396	UPF2	100	90.236	ENSFDAG00000014348	UPF2	99	90.383	Fukomys_damarensis
ENSCANG00000040396	UPF2	99	77.577	ENSFHEG00000009826	UPF2	99	77.109	Fundulus_heteroclitus
ENSCANG00000040396	UPF2	91	78.866	ENSGMOG00000005557	UPF2	100	75.932	Gadus_morhua
ENSCANG00000040396	UPF2	100	88.050	ENSGALG00000033772	UPF2	99	87.432	Gallus_gallus
ENSCANG00000040396	UPF2	100	74.727	ENSGAFG00000020867	UPF2	99	76.452	Gambusia_affinis
ENSCANG00000040396	UPF2	90	79.138	ENSGACG00000001080	UPF2	100	77.149	Gasterosteus_aculeatus
ENSCANG00000040396	UPF2	100	86.641	ENSGAGG00000002700	UPF2	99	86.797	Gopherus_agassizii
ENSCANG00000040396	UPF2	100	96.437	ENSGGOG00000001479	UPF2	100	96.437	Gorilla_gorilla
ENSCANG00000040396	UPF2	100	76.209	ENSHBUG00000004249	UPF2	100	77.614	Haplochromis_burtoni
ENSCANG00000040396	UPF2	100	90.323	ENSHGLG00000015176	-	99	90.312	Heterocephalus_glaber_female
ENSCANG00000040396	UPF2	100	80.409	ENSHGLG00000003822	-	99	79.062	Heterocephalus_glaber_female
ENSCANG00000040396	UPF2	100	87.717	ENSHGLG00100010036	UPF2	100	85.108	Heterocephalus_glaber_male
ENSCANG00000040396	UPF2	100	75.758	ENSHCOG00000004025	UPF2	99	75.386	Hippocampus_comes
ENSCANG00000040396	UPF2	100	77.127	ENSIPUG00000015524	UPF2	99	76.804	Ictalurus_punctatus
ENSCANG00000040396	UPF2	100	92.047	ENSSTOG00000013075	UPF2	99	91.400	Ictidomys_tridecemlineatus
ENSCANG00000040396	UPF2	100	90.551	ENSJJAG00000004913	Upf2	99	89.601	Jaculus_jaculus
ENSCANG00000040396	UPF2	99	77.212	ENSKMAG00000001071	UPF2	99	77.163	Kryptolebias_marmoratus
ENSCANG00000040396	UPF2	100	77.855	ENSLBEG00000016394	-	100	77.437	Labrus_bergylta
ENSCANG00000040396	UPF2	81	82.237	ENSLBEG00000000728	-	93	82.336	Labrus_bergylta
ENSCANG00000040396	UPF2	99	73.520	ENSLACG00000015945	UPF2	100	76.194	Latimeria_chalumnae
ENSCANG00000040396	UPF2	91	83.204	ENSLOCG00000015698	UPF2	99	80.595	Lepisosteus_oculatus
ENSCANG00000040396	UPF2	100	94.774	ENSMFAG00000043865	UPF2	100	94.774	Macaca_fascicularis
ENSCANG00000040396	UPF2	100	94.178	ENSMMUG00000008241	UPF2	99	93.516	Macaca_mulatta
ENSCANG00000040396	UPF2	82	99.512	ENSMNEG00000008062	UPF2	100	99.512	Macaca_nemestrina
ENSCANG00000040396	UPF2	100	96.754	ENSMLEG00000036120	UPF2	99	99.874	Mandrillus_leucophaeus
ENSCANG00000040396	UPF2	100	77.605	ENSMAMG00000018276	UPF2	100	77.026	Mastacembelus_armatus
ENSCANG00000040396	UPF2	100	76.209	ENSMZEG00005021595	UPF2	99	77.614	Maylandia_zebra
ENSCANG00000040396	UPF2	99	87.490	ENSMGAG00000004573	UPF2	99	86.875	Meleagris_gallopavo
ENSCANG00000040396	UPF2	100	88.898	ENSMAUG00000016512	Upf2	99	89.132	Mesocricetus_auratus
ENSCANG00000040396	UPF2	100	89.470	ENSMICG00000001716	UPF2	100	89.628	Microcebus_murinus
ENSCANG00000040396	UPF2	100	89.367	ENSMOCG00000008263	Upf2	99	90.618	Microtus_ochrogaster
ENSCANG00000040396	UPF2	90	79.072	ENSMMOG00000006528	UPF2	100	76.711	Mola_mola
ENSCANG00000040396	UPF2	100	89.929	ENSMODG00000016794	UPF2	99	89.297	Monodelphis_domestica
ENSCANG00000040396	UPF2	100	77.127	ENSMALG00000002663	UPF2	100	77.533	Monopterus_albus
ENSCANG00000040396	UPF2	100	90.774	MGP_CAROLIEiJ_G0023157	Upf2	99	91.319	Mus_caroli
ENSCANG00000040396	UPF2	100	91.165	ENSMUSG00000043241	Upf2	99	91.321	Mus_musculus
ENSCANG00000040396	UPF2	100	90.852	MGP_PahariEiJ_G0019217	Upf2	99	91.009	Mus_pahari
ENSCANG00000040396	UPF2	100	91.400	MGP_SPRETEiJ_G0024075	Upf2	99	91.556	Mus_spretus
ENSCANG00000040396	UPF2	100	92.132	ENSMPUG00000001064	UPF2	99	91.484	Mustela_putorius_furo
ENSCANG00000040396	UPF2	100	90.902	ENSMLUG00000000228	UPF2	100	90.576	Myotis_lucifugus
ENSCANG00000040396	UPF2	100	76.209	ENSNBRG00000013629	UPF2	99	77.614	Neolamprologus_brichardi
ENSCANG00000040396	UPF2	100	94.458	ENSNLEG00000012058	UPF2	100	94.458	Nomascus_leucogenys
ENSCANG00000040396	UPF2	61	97.927	ENSMEUG00000002180	-	59	97.927	Notamacropus_eugenii
ENSCANG00000040396	UPF2	76	100.000	ENSOPRG00000006801	-	78	100.000	Ochotona_princeps
ENSCANG00000040396	UPF2	100	89.221	ENSODEG00000001290	UPF2	99	89.844	Octodon_degus
ENSCANG00000040396	UPF2	100	76.287	ENSONIG00000017991	UPF2	99	77.692	Oreochromis_niloticus
ENSCANG00000040396	UPF2	100	90.767	ENSOCUG00000006230	UPF2	100	90.443	Oryctolagus_cuniculus
ENSCANG00000040396	UPF2	100	76.809	ENSORLG00000017189	UPF2	99	77.149	Oryzias_latipes
ENSCANG00000040396	UPF2	100	76.809	ENSORLG00020005969	UPF2	99	77.149	Oryzias_latipes_hni
ENSCANG00000040396	UPF2	100	76.809	ENSORLG00015005713	UPF2	99	77.149	Oryzias_latipes_hsok
ENSCANG00000040396	UPF2	100	73.520	ENSOMEG00000023420	UPF2	98	73.953	Oryzias_melastigma
ENSCANG00000040396	UPF2	100	92.840	ENSOGAG00000005796	UPF2	99	92.188	Otolemur_garnettii
ENSCANG00000040396	UPF2	100	91.987	ENSOARG00000014587	UPF2	99	91.342	Ovis_aries
ENSCANG00000040396	UPF2	100	95.724	ENSPPAG00000037953	UPF2	100	95.724	Pan_paniscus
ENSCANG00000040396	UPF2	100	91.975	ENSPPRG00000000690	UPF2	99	91.406	Panthera_pardus
ENSCANG00000040396	UPF2	100	91.975	ENSPTIG00000008867	UPF2	99	91.406	Panthera_tigris_altaica
ENSCANG00000040396	UPF2	100	96.437	ENSPTRG00000002291	UPF2	100	96.437	Pan_troglodytes
ENSCANG00000040396	UPF2	100	96.675	ENSPANG00000023399	UPF2	100	96.675	Papio_anubis
ENSCANG00000040396	UPF2	100	76.112	ENSPKIG00000025502	UPF2	99	77.149	Paramormyrops_kingsleyae
ENSCANG00000040396	UPF2	61	91.379	ENSPSIG00000015158	UPF2	95	91.379	Pelodiscus_sinensis
ENSCANG00000040396	UPF2	100	74.766	ENSPMGG00000005259	UPF2	100	75.545	Periophthalmus_magnuspinnatus
ENSCANG00000040396	UPF2	93	94.186	ENSPEMG00000015731	Upf2	99	94.186	Peromyscus_maniculatus_bairdii
ENSCANG00000040396	UPF2	100	87.569	ENSPCIG00000006656	UPF2	100	88.984	Phascolarctos_cinereus
ENSCANG00000040396	UPF2	100	75.039	ENSPFOG00000017118	UPF2	99	76.762	Poecilia_formosa
ENSCANG00000040396	UPF2	100	75.039	ENSPLAG00000005094	UPF2	99	76.762	Poecilia_latipinna
ENSCANG00000040396	UPF2	100	75.039	ENSPMEG00000017009	UPF2	99	76.762	Poecilia_mexicana
ENSCANG00000040396	UPF2	100	74.824	ENSPREG00000021880	UPF2	100	76.168	Poecilia_reticulata
ENSCANG00000040396	UPF2	65	91.138	ENSPPYG00000002089	-	99	90.166	Pongo_abelii
ENSCANG00000040396	UPF2	100	77.891	ENSPCAG00000000684	UPF2	99	77.344	Procavia_capensis
ENSCANG00000040396	UPF2	100	93.191	ENSPCOG00000021656	UPF2	100	93.112	Propithecus_coquereli
ENSCANG00000040396	UPF2	100	83.962	ENSPVAG00000017286	UPF2	99	84.075	Pteropus_vampyrus
ENSCANG00000040396	UPF2	100	73.791	ENSPNYG00000017096	UPF2	100	75.213	Pundamilia_nyererei
ENSCANG00000040396	UPF2	100	78.142	ENSPNAG00000009357	UPF2	99	77.984	Pygocentrus_nattereri
ENSCANG00000040396	UPF2	100	84.969	ENSRNOG00000023593	Upf2	99	92.548	Rattus_norvegicus
ENSCANG00000040396	UPF2	100	95.724	ENSRBIG00000037780	UPF2	100	95.724	Rhinopithecus_bieti
ENSCANG00000040396	UPF2	100	96.754	ENSRROG00000043547	UPF2	100	96.754	Rhinopithecus_roxellana
ENSCANG00000040396	UPF2	100	93.112	ENSSBOG00000020012	UPF2	99	93.041	Saimiri_boliviensis_boliviensis
ENSCANG00000040396	UPF2	100	76.617	ENSSFOG00015023788	upf2	100	76.875	Scleropages_formosus
ENSCANG00000040396	UPF2	90	77.643	ENSSMAG00000007637	UPF2	100	75.154	Scophthalmus_maximus
ENSCANG00000040396	UPF2	100	77.457	ENSSDUG00000017244	UPF2	100	77.498	Seriola_dumerili
ENSCANG00000040396	UPF2	100	76.669	ENSSLDG00000016866	UPF2	100	77.026	Seriola_lalandi_dorsalis
ENSCANG00000040396	UPF2	100	89.851	ENSSARG00000008615	UPF2	99	89.297	Sorex_araneus
ENSCANG00000040396	UPF2	100	83.950	ENSSPUG00000014544	UPF2	99	83.828	Sphenodon_punctatus
ENSCANG00000040396	UPF2	68	90.668	ENSSSCG00000011117	-	99	89.738	Sus_scrofa
ENSCANG00000040396	UPF2	99	85.984	ENSTGUG00000002163	-	100	87.256	Taeniopygia_guttata
ENSCANG00000040396	UPF2	100	76.989	ENSTRUG00000007519	UPF2	99	76.995	Takifugu_rubripes
ENSCANG00000040396	UPF2	100	75.598	ENSTNIG00000004453	UPF2	99	75.521	Tetraodon_nigroviridis
ENSCANG00000040396	UPF2	94	88.230	ENSTBEG00000012679	UPF2	93	87.563	Tupaia_belangeri
ENSCANG00000040396	UPF2	100	90.401	ENSTTRG00000016388	UPF2	99	90.938	Tursiops_truncatus
ENSCANG00000040396	UPF2	100	88.013	ENSUAMG00000023560	UPF2	95	100.000	Ursus_americanus
ENSCANG00000040396	UPF2	100	92.368	ENSUMAG00000012953	UPF2	95	91.719	Ursus_maritimus
ENSCANG00000040396	UPF2	87	96.774	ENSVPAG00000006763	UPF2	85	96.774	Vicugna_pacos
ENSCANG00000040396	UPF2	100	92.054	ENSVVUG00000006166	UPF2	99	94.039	Vulpes_vulpes
ENSCANG00000040396	UPF2	100	80.078	ENSXETG00000033103	UPF2	91	85.628	Xenopus_tropicalis
ENSCANG00000040396	UPF2	91	79.181	ENSXCOG00000011604	UPF2	100	76.452	Xiphophorus_couchianus
ENSCANG00000040396	UPF2	91	79.437	ENSXMAG00000017209	UPF2	99	76.452	Xiphophorus_maculatus