EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCANG00000040631 (Gene tree)
Gene ID: -
Gene Symbol: TRMT1
Alias: FLJ20244|TRM1
Full Name: tRNA methyltransferase 1
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Plus strand
Length: 13493 bases
Position: chrKN982575.1:19186-32678
Accession: 105520924
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000033949	zf-CCCH	PF00642.24	9e-07	1	1
ENSCANP00000033946	zf-CCCH	PF00642.24	9.6e-07	1	1
ENSCANP00000033946	TRM	PF02005.16	6.3e-87	1	2
ENSCANP00000033946	TRM	PF02005.16	6.3e-87	2	2
ENSCANP00000033949	TRM	PF02005.16	1.6e-78	1	2
ENSCANP00000033949	TRM	PF02005.16	1.6e-78	2	2
ENSCANP00000033949	Met_10	PF02475.16	0.00023	1	1
ENSCANP00000033946	Met_10	PF02475.16	0.00025	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000057176	TRMT1-202	1731	-	ENSCANP00000033949	576 (aa)	-	A0A2K5JYM6
ENSCANT00000057173	TRMT1-201	1818	XM_011954939	ENSCANP00000033946	605 (aa)	XP_011810329	A0A2K5JYL7

Gene Model

Click here to download ENSCANG00000040631's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000040631's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCANG00000040631	TRMT1	97	61.111	ENSCANG00000031650	-	99	61.431

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000040631	TRMT1	97	79.531	ENSG00000104907	TRMT1	91	89.610	Homo_sapiens
ENSCANG00000040631	TRMT1	99	71.210	ENSAMEG00000012598	TRMT1	97	71.210	Ailuropoda_melanoleuca
ENSCANG00000040631	TRMT1	86	54.963	ENSACIG00000018680	trmt1	88	54.963	Amphilophus_citrinellus
ENSCANG00000040631	TRMT1	87	52.677	ENSAOCG00000006781	trmt1	86	52.677	Amphiprion_ocellaris
ENSCANG00000040631	TRMT1	87	52.759	ENSAPEG00000007712	trmt1	86	52.759	Amphiprion_percula
ENSCANG00000040631	TRMT1	87	53.913	ENSATEG00000001872	trmt1	84	53.913	Anabas_testudineus
ENSCANG00000040631	TRMT1	89	52.373	ENSACAG00000003825	TRMT1	95	52.373	Anolis_carolinensis
ENSCANG00000040631	TRMT1	98	74.343	ENSANAG00000023016	TRMT1	99	75.606	Aotus_nancymaae
ENSCANG00000040631	TRMT1	86	54.189	ENSACLG00000010073	trmt1	92	54.189	Astatotilapia_calliptera
ENSCANG00000040631	TRMT1	87	53.368	ENSAMXG00000012026	trmt1	85	53.368	Astyanax_mexicanus
ENSCANG00000040631	TRMT1	99	70.904	ENSBTAG00000019325	TRMT1	93	70.904	Bos_taurus
ENSCANG00000040631	TRMT1	79	30.601	WBGene00006613	trm-1	96	30.601	Caenorhabditis_elegans
ENSCANG00000040631	TRMT1	98	73.611	ENSCJAG00000004566	TRMT1	99	73.611	Callithrix_jacchus
ENSCANG00000040631	TRMT1	99	72.936	ENSCAFG00000017070	TRMT1	100	73.239	Canis_familiaris
ENSCANG00000040631	TRMT1	99	72.640	ENSCAFG00020005397	TRMT1	98	72.640	Canis_lupus_dingo
ENSCANG00000040631	TRMT1	99	70.948	ENSCHIG00000013569	TRMT1	98	70.948	Capra_hircus
ENSCANG00000040631	TRMT1	97	68.069	ENSTSYG00000003207	TRMT1	99	68.244	Carlito_syrichta
ENSCANG00000040631	TRMT1	85	62.811	ENSCAPG00000003355	TRMT1	98	62.811	Cavia_aperea
ENSCANG00000040631	TRMT1	98	67.030	ENSCPOG00000011754	TRMT1	97	67.030	Cavia_porcellus
ENSCANG00000040631	TRMT1	100	71.189	ENSCCAG00000022263	TRMT1	99	74.230	Cebus_capucinus
ENSCANG00000040631	TRMT1	81	73.494	ENSCATG00000038220	-	99	59.150	Cercocebus_atys
ENSCANG00000040631	TRMT1	99	81.164	ENSCATG00000039850	TRMT1	98	81.164	Cercocebus_atys
ENSCANG00000040631	TRMT1	97	70.469	ENSCLAG00000015295	TRMT1	98	67.296	Chinchilla_lanigera
ENSCANG00000040631	TRMT1	76	80.567	ENSCSAG00000006500	TRMT1	93	80.567	Chlorocebus_sabaeus
ENSCANG00000040631	TRMT1	95	52.276	ENSCPBG00000023866	TRMT1	94	52.904	Chrysemys_picta_bellii
ENSCANG00000040631	TRMT1	83	35.135	ENSCING00000002884	-	98	35.135	Ciona_intestinalis
ENSCANG00000040631	TRMT1	83	35.135	ENSCSAVG00000010927	-	100	34.694	Ciona_savignyi
ENSCANG00000040631	TRMT1	99	67.381	ENSCGRG00001022594	Trmt1	98	67.391	Cricetulus_griseus_chok1gshd
ENSCANG00000040631	TRMT1	99	67.381	ENSCGRG00000017732	Trmt1	98	67.381	Cricetulus_griseus_crigri
ENSCANG00000040631	TRMT1	86	52.696	ENSCSEG00000001643	trmt1	84	52.696	Cynoglossus_semilaevis
ENSCANG00000040631	TRMT1	91	52.413	ENSCVAG00000011886	trmt1	89	52.413	Cyprinodon_variegatus
ENSCANG00000040631	TRMT1	86	53.184	ENSDARG00000010978	trmt1	85	53.184	Danio_rerio
ENSCANG00000040631	TRMT1	68	89.189	ENSDNOG00000048240	-	70	89.189	Dasypus_novemcinctus
ENSCANG00000040631	TRMT1	99	70.216	ENSDORG00000014298	Trmt1	99	70.216	Dipodomys_ordii
ENSCANG00000040631	TRMT1	77	36.538	FBgn0032430	CG6388	87	36.538	Drosophila_melanogaster
ENSCANG00000040631	TRMT1	77	37.938	ENSEBUG00000003449	trmt1	74	38.104	Eptatretus_burgeri
ENSCANG00000040631	TRMT1	95	72.045	ENSEASG00005004050	TRMT1	100	71.987	Equus_asinus_asinus
ENSCANG00000040631	TRMT1	95	72.364	ENSECAG00000016149	TRMT1	100	72.300	Equus_caballus
ENSCANG00000040631	TRMT1	50	81.928	ENSEEUG00000014102	-	79	81.928	Erinaceus_europaeus
ENSCANG00000040631	TRMT1	86	52.513	ENSELUG00000021659	trmt1	85	52.513	Esox_lucius
ENSCANG00000040631	TRMT1	99	72.129	ENSFCAG00000000483	TRMT1	99	72.129	Felis_catus
ENSCANG00000040631	TRMT1	99	67.841	ENSFDAG00000007386	TRMT1	98	67.841	Fukomys_damarensis
ENSCANG00000040631	TRMT1	86	51.300	ENSFHEG00000012865	trmt1	88	54.064	Fundulus_heteroclitus
ENSCANG00000040631	TRMT1	87	47.387	ENSGMOG00000006564	trmt1	98	47.909	Gadus_morhua
ENSCANG00000040631	TRMT1	86	53.403	ENSGAFG00000011862	trmt1	88	53.403	Gambusia_affinis
ENSCANG00000040631	TRMT1	87	49.913	ENSGACG00000000227	trmt1	92	50.347	Gasterosteus_aculeatus
ENSCANG00000040631	TRMT1	95	52.119	ENSGAGG00000016432	TRMT1	93	52.119	Gopherus_agassizii
ENSCANG00000040631	TRMT1	97	79.688	ENSGGOG00000014007	TRMT1	99	79.632	Gorilla_gorilla
ENSCANG00000040631	TRMT1	88	51.434	ENSHBUG00000008821	trmt1	95	51.434	Haplochromis_burtoni
ENSCANG00000040631	TRMT1	98	68.837	ENSHGLG00000015972	TRMT1	98	68.837	Heterocephalus_glaber_female
ENSCANG00000040631	TRMT1	98	64.409	ENSHGLG00100018112	TRMT1	98	64.025	Heterocephalus_glaber_male
ENSCANG00000040631	TRMT1	87	51.675	ENSHCOG00000009447	trmt1	88	51.675	Hippocampus_comes
ENSCANG00000040631	TRMT1	86	52.730	ENSIPUG00000002899	trmt1	85	53.072	Ictalurus_punctatus
ENSCANG00000040631	TRMT1	99	72.324	ENSSTOG00000012531	TRMT1	98	72.324	Ictidomys_tridecemlineatus
ENSCANG00000040631	TRMT1	94	68.387	ENSJJAG00000017154	Trmt1	98	67.176	Jaculus_jaculus
ENSCANG00000040631	TRMT1	86	54.799	ENSKMAG00000011809	trmt1	96	52.850	Kryptolebias_marmoratus
ENSCANG00000040631	TRMT1	86	53.147	ENSLBEG00000012703	trmt1	84	53.147	Labrus_bergylta
ENSCANG00000040631	TRMT1	87	49.231	ENSLACG00000014585	TRMT1	93	49.481	Latimeria_chalumnae
ENSCANG00000040631	TRMT1	69	56.347	ENSLOCG00000006479	trmt1	97	50.000	Lepisosteus_oculatus
ENSCANG00000040631	TRMT1	98	71.628	ENSLAFG00000014072	TRMT1	99	71.628	Loxodonta_africana
ENSCANG00000040631	TRMT1	99	81.470	ENSMFAG00000033143	TRMT1	98	81.470	Macaca_fascicularis
ENSCANG00000040631	TRMT1	99	76.442	ENSMMUG00000001167	TRMT1	99	76.442	Macaca_mulatta
ENSCANG00000040631	TRMT1	99	81.317	ENSMNEG00000037867	TRMT1	98	81.317	Macaca_nemestrina
ENSCANG00000040631	TRMT1	99	80.704	ENSMLEG00000016142	TRMT1	99	80.704	Mandrillus_leucophaeus
ENSCANG00000040631	TRMT1	86	53.833	ENSMAMG00000004357	trmt1	85	53.833	Mastacembelus_armatus
ENSCANG00000040631	TRMT1	86	54.724	ENSMZEG00005014510	trmt1	85	54.724	Maylandia_zebra
ENSCANG00000040631	TRMT1	97	67.712	ENSMAUG00000011134	Trmt1	98	67.125	Mesocricetus_auratus
ENSCANG00000040631	TRMT1	99	74.924	ENSMICG00000000793	TRMT1	98	74.924	Microcebus_murinus
ENSCANG00000040631	TRMT1	97	68.711	ENSMOCG00000015895	Trmt1	98	67.890	Microtus_ochrogaster
ENSCANG00000040631	TRMT1	86	51.957	ENSMMOG00000011097	trmt1	92	51.957	Mola_mola
ENSCANG00000040631	TRMT1	92	61.211	ENSMODG00000011619	TRMT1	98	61.211	Monodelphis_domestica
ENSCANG00000040631	TRMT1	99	67.278	MGP_CAROLIEiJ_G0031304	Trmt1	92	76.074	Mus_caroli
ENSCANG00000040631	TRMT1	99	66.820	ENSMUSG00000001909	Trmt1	92	74.272	Mus_musculus
ENSCANG00000040631	TRMT1	99	66.820	MGP_SPRETEiJ_G0032422	Trmt1	92	74.847	Mus_spretus
ENSCANG00000040631	TRMT1	99	72.282	ENSMPUG00000004210	TRMT1	93	72.282	Mustela_putorius_furo
ENSCANG00000040631	TRMT1	99	71.560	ENSMLUG00000012809	TRMT1	97	71.560	Myotis_lucifugus
ENSCANG00000040631	TRMT1	98	68.056	ENSNGAG00000022486	Trmt1	98	68.056	Nannospalax_galili
ENSCANG00000040631	TRMT1	79	63.750	ENSNBRG00000024376	trmt1	85	63.750	Neolamprologus_brichardi
ENSCANG00000040631	TRMT1	74	96.667	ENSNLEG00000013019	-	92	94.737	Nomascus_leucogenys
ENSCANG00000040631	TRMT1	91	61.333	ENSMEUG00000013756	TRMT1	100	61.333	Notamacropus_eugenii
ENSCANG00000040631	TRMT1	78	68.041	ENSOPRG00000009471	-	76	68.041	Ochotona_princeps
ENSCANG00000040631	TRMT1	98	69.147	ENSODEG00000010323	TRMT1	97	69.147	Octodon_degus
ENSCANG00000040631	TRMT1	92	52.640	ENSONIG00000000400	trmt1	96	52.640	Oreochromis_niloticus
ENSCANG00000040631	TRMT1	76	71.919	ENSOCUG00000021934	TRMT1	93	71.919	Oryctolagus_cuniculus
ENSCANG00000040631	TRMT1	86	52.941	ENSORLG00000020074	trmt1	90	51.123	Oryzias_latipes
ENSCANG00000040631	TRMT1	86	52.273	ENSORLG00020007561	trmt1	89	52.273	Oryzias_latipes_hni
ENSCANG00000040631	TRMT1	86	52.448	ENSORLG00015006547	trmt1	86	52.448	Oryzias_latipes_hsok
ENSCANG00000040631	TRMT1	86	53.147	ENSOMEG00000019343	trmt1	86	53.147	Oryzias_melastigma
ENSCANG00000040631	TRMT1	97	70.359	ENSOGAG00000025576	TRMT1	100	70.359	Otolemur_garnettii
ENSCANG00000040631	TRMT1	99	58.427	ENSOARG00000009397	TRMT1	92	57.862	Ovis_aries
ENSCANG00000040631	TRMT1	99	63.594	ENSPPRG00000012117	TRMT1	100	63.594	Panthera_pardus
ENSCANG00000040631	TRMT1	76	80.597	ENSPTIG00000008833	TRMT1	89	80.597	Panthera_tigris_altaica
ENSCANG00000040631	TRMT1	97	79.688	ENSPTRG00000010557	TRMT1	99	79.632	Pan_troglodytes
ENSCANG00000040631	TRMT1	98	59.490	ENSPTRG00000050421	-	98	59.490	Pan_troglodytes
ENSCANG00000040631	TRMT1	97	58.949	ENSPANG00000034058	-	98	59.835	Papio_anubis
ENSCANG00000040631	TRMT1	99	81.623	ENSPANG00000009247	TRMT1	99	81.623	Papio_anubis
ENSCANG00000040631	TRMT1	87	55.382	ENSPKIG00000005309	trmt1	84	55.382	Paramormyrops_kingsleyae
ENSCANG00000040631	TRMT1	83	51.083	ENSPSIG00000008762	TRMT1	80	51.083	Pelodiscus_sinensis
ENSCANG00000040631	TRMT1	87	52.348	ENSPMGG00000019764	trmt1	90	52.348	Periophthalmus_magnuspinnatus
ENSCANG00000040631	TRMT1	96	69.764	ENSPEMG00000016247	Trmt1	98	68.702	Peromyscus_maniculatus_bairdii
ENSCANG00000040631	TRMT1	87	47.059	ENSPMAG00000004329	trmt1	90	47.059	Petromyzon_marinus
ENSCANG00000040631	TRMT1	95	60.606	ENSPCIG00000019273	TRMT1	96	60.606	Phascolarctos_cinereus
ENSCANG00000040631	TRMT1	86	54.799	ENSPFOG00000008527	trmt1	88	54.799	Poecilia_formosa
ENSCANG00000040631	TRMT1	86	54.450	ENSPLAG00000018788	trmt1	88	54.450	Poecilia_latipinna
ENSCANG00000040631	TRMT1	86	54.625	ENSPMEG00000013120	trmt1	88	54.625	Poecilia_mexicana
ENSCANG00000040631	TRMT1	86	54.912	ENSPREG00000000211	trmt1	85	54.912	Poecilia_reticulata
ENSCANG00000040631	TRMT1	97	79.844	ENSPPYG00000009622	TRMT1	99	79.786	Pongo_abelii
ENSCANG00000040631	TRMT1	98	65.271	ENSPCAG00000003698	TRMT1	99	65.271	Procavia_capensis
ENSCANG00000040631	TRMT1	99	75.076	ENSPCOG00000008653	TRMT1	99	75.076	Propithecus_coquereli
ENSCANG00000040631	TRMT1	100	71.818	ENSPVAG00000015076	TRMT1	100	71.818	Pteropus_vampyrus
ENSCANG00000040631	TRMT1	86	54.724	ENSPNYG00000013960	trmt1	92	54.724	Pundamilia_nyererei
ENSCANG00000040631	TRMT1	80	55.172	ENSPNAG00000024859	trmt1	83	51.255	Pygocentrus_nattereri
ENSCANG00000040631	TRMT1	96	67.666	ENSRNOG00000002914	Trmt1	99	67.666	Rattus_norvegicus
ENSCANG00000040631	TRMT1	99	82.236	ENSRBIG00000038324	TRMT1	98	82.236	Rhinopithecus_bieti
ENSCANG00000040631	TRMT1	96	66.232	ENSRBIG00000037505	-	99	66.294	Rhinopithecus_bieti
ENSCANG00000040631	TRMT1	96	65.894	ENSRROG00000031847	-	98	65.964	Rhinopithecus_roxellana
ENSCANG00000040631	TRMT1	99	82.083	ENSRROG00000028599	TRMT1	98	82.083	Rhinopithecus_roxellana
ENSCANG00000040631	TRMT1	76	30.019	YDR120C	-	92	30.000	Saccharomyces_cerevisiae
ENSCANG00000040631	TRMT1	100	72.104	ENSSBOG00000028861	TRMT1	99	74.068	Saimiri_boliviensis_boliviensis
ENSCANG00000040631	TRMT1	89	61.800	ENSSHAG00000014381	TRMT1	97	61.360	Sarcophilus_harrisii
ENSCANG00000040631	TRMT1	87	54.530	ENSSFOG00015004139	trmt1	84	54.530	Scleropages_formosus
ENSCANG00000040631	TRMT1	86	53.125	ENSSMAG00000021136	trmt1	85	53.125	Scophthalmus_maximus
ENSCANG00000040631	TRMT1	86	53.310	ENSSDUG00000012740	trmt1	84	53.310	Seriola_dumerili
ENSCANG00000040631	TRMT1	86	53.136	ENSSLDG00000005971	trmt1	84	53.136	Seriola_lalandi_dorsalis
ENSCANG00000040631	TRMT1	84	66.014	ENSSARG00000005138	TRMT1	99	66.014	Sorex_araneus
ENSCANG00000040631	TRMT1	87	44.580	ENSSPUG00000001084	TRMT1	90	45.518	Sphenodon_punctatus
ENSCANG00000040631	TRMT1	87	53.546	ENSSPAG00000007153	trmt1	94	53.263	Stegastes_partitus
ENSCANG00000040631	TRMT1	97	73.125	ENSSSCG00000013744	TRMT1	100	73.125	Sus_scrofa
ENSCANG00000040631	TRMT1	89	48.167	ENSTRUG00000010700	trmt1	89	48.333	Takifugu_rubripes
ENSCANG00000040631	TRMT1	86	53.136	ENSTNIG00000018808	trmt1	98	53.136	Tetraodon_nigroviridis
ENSCANG00000040631	TRMT1	98	69.552	ENSTTRG00000006379	TRMT1	99	69.419	Tursiops_truncatus
ENSCANG00000040631	TRMT1	99	71.166	ENSUAMG00000022911	TRMT1	99	71.166	Ursus_americanus
ENSCANG00000040631	TRMT1	97	71.317	ENSUMAG00000006027	TRMT1	100	71.317	Ursus_maritimus
ENSCANG00000040631	TRMT1	99	72.936	ENSVVUG00000024177	TRMT1	98	72.936	Vulpes_vulpes
ENSCANG00000040631	TRMT1	67	56.818	ENSXETG00000033863	TRMT1	88	56.818	Xenopus_tropicalis
ENSCANG00000040631	TRMT1	86	54.101	ENSXCOG00000015733	trmt1	88	54.101	Xiphophorus_couchianus
ENSCANG00000040631	TRMT1	87	53.646	ENSXMAG00000013823	trmt1	98	53.646	Xiphophorus_maculatus