EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCANG00000040651 (Gene tree)
Gene ID
105516362
Gene Symbol
MSI1
Alias
-
Full Name
musashi RNA binding protein 1
Gene Type
protein_coding
Species
Colobus_angolensis_palliatus
Status
putative
Strand
Plus strand
Length
22650 bases
Position
chrKN981379.1:8121285-8143934
Accession
105516362
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCANP00000033957RRM_1PF00076.229.7e-2912
ENSCANP00000033957RRM_1PF00076.229.7e-2922
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCANT00000057184MSI1-201987XM_011948561ENSCANP00000033957328 (aa)XP_011803951A0A2K5JYR5
Gene Model
Click here to download ENSCANG00000040651's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000040651's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCANG00000040651MSI19968.807ENSCANG00000036414MSI29181.043
ENSCANG00000040651MSI15342.308ENSCANG00000040380DAZAP15640.741
ENSCANG00000040651MSI15042.529ENSCANG00000018501HNRNPD6943.373
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCANG00000040651MSI1100100.000ENSG00000135097MSI198100.000Homo_sapiens
ENSCANG00000040651MSI110085.366ENSAPOG00000023458-9485.366Acanthochromis_polyacanthus
ENSCANG00000040651MSI110085.366ENSAPOG00000003191MSI19485.366Acanthochromis_polyacanthus
ENSCANG00000040651MSI110081.316ENSAMEG00000013302MSI110081.316Ailuropoda_melanoleuca
ENSCANG00000040651MSI19681.905ENSACIG00000017754-7881.905Amphilophus_citrinellus
ENSCANG00000040651MSI110076.524ENSAOCG00000009031-9576.829Amphiprion_ocellaris
ENSCANG00000040651MSI110085.366ENSAOCG00000003804MSI19485.366Amphiprion_ocellaris
ENSCANG00000040651MSI110085.366ENSAPEG00000006857-7985.366Amphiprion_percula
ENSCANG00000040651MSI110085.366ENSAPEG00000003245MSI19485.366Amphiprion_percula
ENSCANG00000040651MSI110082.371ENSATEG00000023779-9382.371Anabas_testudineus
ENSCANG00000040651MSI110085.061ENSATEG00000017059MSI19585.061Anabas_testudineus
ENSCANG00000040651MSI110096.951ENSACAG00000002762MSI19496.951Anolis_carolinensis
ENSCANG00000040651MSI18096.212ENSANAG00000027901-9296.212Aotus_nancymaae
ENSCANG00000040651MSI1100100.000ENSANAG00000027151MSI198100.000Aotus_nancymaae
ENSCANG00000040651MSI110084.756ENSACLG00000011230MSI19484.756Astatotilapia_calliptera
ENSCANG00000040651MSI110084.756ENSACLG00000000117-10084.756Astatotilapia_calliptera
ENSCANG00000040651MSI110083.841ENSAMXG00000038960msi17683.841Astyanax_mexicanus
ENSCANG00000040651MSI1100100.000ENSBTAG00000009800MSI1100100.000Bos_taurus
ENSCANG00000040651MSI1100100.000ENSCJAG00000008578MSI198100.000Callithrix_jacchus
ENSCANG00000040651MSI110099.695ENSCAFG00000010283MSI19899.695Canis_familiaris
ENSCANG00000040651MSI199100.000ENSCAFG00020020585MSI1100100.000Canis_lupus_dingo
ENSCANG00000040651MSI110094.030ENSCHIG00000024304MSI19894.030Capra_hircus
ENSCANG00000040651MSI199100.000ENSTSYG00000033949MSI195100.000Carlito_syrichta
ENSCANG00000040651MSI19989.776ENSCAPG00000003919MSI18989.776Cavia_aperea
ENSCANG00000040651MSI1100100.000ENSCPOG00000012361MSI1100100.000Cavia_porcellus
ENSCANG00000040651MSI1100100.000ENSCCAG00000035567MSI198100.000Cebus_capucinus
ENSCANG00000040651MSI1100100.000ENSCATG00000030019MSI198100.000Cercocebus_atys
ENSCANG00000040651MSI1100100.000ENSCLAG00000011329MSI1100100.000Chinchilla_lanigera
ENSCANG00000040651MSI17295.885ENSCSAG00000002265MSI18995.885Chlorocebus_sabaeus
ENSCANG00000040651MSI110096.037ENSCPBG00000011349MSI19496.037Chrysemys_picta_bellii
ENSCANG00000040651MSI1100100.000ENSCGRG00001018883Msi198100.000Cricetulus_griseus_chok1gshd
ENSCANG00000040651MSI1100100.000ENSCGRG00000002191Msi173100.000Cricetulus_griseus_crigri
ENSCANG00000040651MSI110083.841ENSCSEG00000008352-9483.841Cynoglossus_semilaevis
ENSCANG00000040651MSI110085.061ENSCSEG00000005834-9485.061Cynoglossus_semilaevis
ENSCANG00000040651MSI110077.439ENSCSEG00000011032MSI110077.439Cynoglossus_semilaevis
ENSCANG00000040651MSI110085.366ENSCVAG00000009100MSI19485.366Cyprinodon_variegatus
ENSCANG00000040651MSI17068.398ENSCVAG00000017463-8968.398Cyprinodon_variegatus
ENSCANG00000040651MSI18882.096ENSDARG00000102015CABZ01037298.18982.096Danio_rerio
ENSCANG00000040651MSI110081.402ENSDARG00000010710msi110085.022Danio_rerio
ENSCANG00000040651MSI110089.939ENSDNOG00000005713MSI19189.939Dasypus_novemcinctus
ENSCANG00000040651MSI1100100.000ENSDORG00000005610Msi193100.000Dipodomys_ordii
ENSCANG00000040651MSI110095.732ENSETEG00000004756MSI110095.732Echinops_telfairi
ENSCANG00000040651MSI1100100.000ENSEASG00005004736MSI198100.000Equus_asinus_asinus
ENSCANG00000040651MSI1100100.000ENSECAG00000017526MSI198100.000Equus_caballus
ENSCANG00000040651MSI110080.488ENSELUG00000023280-10080.183Esox_lucius
ENSCANG00000040651MSI110079.598ENSELUG00000023219MSI19279.598Esox_lucius
ENSCANG00000040651MSI1100100.000ENSFCAG00000011007MSI198100.000Felis_catus
ENSCANG00000040651MSI19995.820ENSFALG00000007574MSI110095.820Ficedula_albicollis
ENSCANG00000040651MSI110099.695ENSFDAG00000019586MSI110099.695Fukomys_damarensis
ENSCANG00000040651MSI110085.366ENSFHEG00000003560-9485.366Fundulus_heteroclitus
ENSCANG00000040651MSI110085.671ENSFHEG00000022446MSI19485.671Fundulus_heteroclitus
ENSCANG00000040651MSI110082.927ENSGMOG00000001006MSI19482.622Gadus_morhua
ENSCANG00000040651MSI110076.829ENSGMOG00000017838-9076.829Gadus_morhua
ENSCANG00000040651MSI19995.238ENSGALG00000007227MSI19686.275Gallus_gallus
ENSCANG00000040651MSI110084.756ENSGAFG00000021522MSI19484.756Gambusia_affinis
ENSCANG00000040651MSI110068.389ENSGAFG00000005860-8968.389Gambusia_affinis
ENSCANG00000040651MSI110081.098ENSGACG00000008674-9481.098Gasterosteus_aculeatus
ENSCANG00000040651MSI110084.146ENSGACG00000012679MSI19484.146Gasterosteus_aculeatus
ENSCANG00000040651MSI110096.037ENSGAGG00000016037MSI19496.037Gopherus_agassizii
ENSCANG00000040651MSI199100.000ENSGGOG00000010328MSI1100100.000Gorilla_gorilla
ENSCANG00000040651MSI110084.756ENSHBUG00000011841-9484.756Haplochromis_burtoni
ENSCANG00000040651MSI110084.756ENSHBUG00000021921MSI19484.756Haplochromis_burtoni
ENSCANG00000040651MSI110099.695ENSHGLG00000012782MSI19899.695Heterocephalus_glaber_female
ENSCANG00000040651MSI110099.695ENSHGLG00100016848MSI110099.695Heterocephalus_glaber_male
ENSCANG00000040651MSI110083.841ENSHCOG00000012067-8983.841Hippocampus_comes
ENSCANG00000040651MSI110080.183ENSHCOG00000012019MSI110080.183Hippocampus_comes
ENSCANG00000040651MSI110083.232ENSIPUG00000001976msi19979.573Ictalurus_punctatus
ENSCANG00000040651MSI199100.000ENSSTOG00000009799MSI1100100.000Ictidomys_tridecemlineatus
ENSCANG00000040651MSI1100100.000ENSJJAG00000010463Msi198100.000Jaculus_jaculus
ENSCANG00000040651MSI110082.927ENSJJAG00000010643-9482.622Jaculus_jaculus
ENSCANG00000040651MSI110082.927ENSKMAG00000019877-10082.927Kryptolebias_marmoratus
ENSCANG00000040651MSI110084.451ENSKMAG00000011251MSI19484.451Kryptolebias_marmoratus
ENSCANG00000040651MSI110084.756ENSLBEG00000001375-9484.756Labrus_bergylta
ENSCANG00000040651MSI110084.756ENSLBEG00000008789MSI19484.756Labrus_bergylta
ENSCANG00000040651MSI110086.890ENSLACG00000018287MSI110086.890Latimeria_chalumnae
ENSCANG00000040651MSI110089.394ENSLAFG00000009412MSI110089.394Loxodonta_africana
ENSCANG00000040651MSI1100100.000ENSMFAG00000001798MSI1100100.000Macaca_fascicularis
ENSCANG00000040651MSI1100100.000ENSMMUG00000031527MSI196100.000Macaca_mulatta
ENSCANG00000040651MSI1100100.000ENSMNEG00000040034MSI198100.000Macaca_nemestrina
ENSCANG00000040651MSI1100100.000ENSMLEG00000003921MSI1100100.000Mandrillus_leucophaeus
ENSCANG00000040651MSI110085.366ENSMAMG00000018426-9485.366Mastacembelus_armatus
ENSCANG00000040651MSI110084.146ENSMAMG00000002279MSI19484.146Mastacembelus_armatus
ENSCANG00000040651MSI110084.756ENSMZEG00005000340-9484.756Maylandia_zebra
ENSCANG00000040651MSI110084.756ENSMZEG00005026892MSI19484.756Maylandia_zebra
ENSCANG00000040651MSI16398.817ENSMGAG00000016518-10098.817Meleagris_gallopavo
ENSCANG00000040651MSI170100.000ENSMAUG00000016820Msi1100100.000Mesocricetus_auratus
ENSCANG00000040651MSI1100100.000ENSMICG00000033181MSI198100.000Microcebus_murinus
ENSCANG00000040651MSI110099.695ENSMOCG00000002286Msi19899.695Microtus_ochrogaster
ENSCANG00000040651MSI110082.012ENSMMOG00000012265-9982.012Mola_mola
ENSCANG00000040651MSI110075.305ENSMMOG00000010492MSI19675.305Mola_mola
ENSCANG00000040651MSI110067.674ENSMODG00000003189-10067.674Monodelphis_domestica
ENSCANG00000040651MSI110084.756ENSMALG00000017889MSI19484.756Monopterus_albus
ENSCANG00000040651MSI110084.451ENSMALG00000001426-10084.451Monopterus_albus
ENSCANG00000040651MSI110099.390MGP_CAROLIEiJ_G0027626Msi19899.390Mus_caroli
ENSCANG00000040651MSI110099.390ENSMUSG00000054256Msi19899.390Mus_musculus
ENSCANG00000040651MSI110099.085MGP_PahariEiJ_G0024206Msi19899.085Mus_pahari
ENSCANG00000040651MSI110099.390MGP_SPRETEiJ_G0028624Msi19899.390Mus_spretus
ENSCANG00000040651MSI199100.000ENSMPUG00000003168MSI1100100.000Mustela_putorius_furo
ENSCANG00000040651MSI110090.149ENSMLUG00000010313MSI110090.149Myotis_lucifugus
ENSCANG00000040651MSI1100100.000ENSNGAG00000014508Msi191100.000Nannospalax_galili
ENSCANG00000040651MSI110084.756ENSNBRG00000000841-9484.756Neolamprologus_brichardi
ENSCANG00000040651MSI19777.432ENSNBRG00000018012MSI19977.432Neolamprologus_brichardi
ENSCANG00000040651MSI110089.634ENSNLEG00000015636MSI110089.634Nomascus_leucogenys
ENSCANG00000040651MSI110077.744ENSMEUG00000015759MSI110077.744Notamacropus_eugenii
ENSCANG00000040651MSI19692.063ENSOPRG00000016879MSI110092.063Ochotona_princeps
ENSCANG00000040651MSI1100100.000ENSODEG00000006328MSI1100100.000Octodon_degus
ENSCANG00000040651MSI110084.756ENSONIG00000011182MSI19484.756Oreochromis_niloticus
ENSCANG00000040651MSI110085.061ENSONIG00000019452-9485.061Oreochromis_niloticus
ENSCANG00000040651MSI19999.678ENSOCUG00000027716MSI110099.678Oryctolagus_cuniculus
ENSCANG00000040651MSI110085.366ENSORLG00000029593MSI19485.366Oryzias_latipes
ENSCANG00000040651MSI110085.366ENSORLG00000019978-9485.366Oryzias_latipes
ENSCANG00000040651MSI110085.366ENSORLG00020008266MSI19982.317Oryzias_latipes_hni
ENSCANG00000040651MSI110085.366ENSORLG00020001208-6785.366Oryzias_latipes_hni
ENSCANG00000040651MSI110085.366ENSORLG00015003916MSI19982.317Oryzias_latipes_hsok
ENSCANG00000040651MSI110085.366ENSORLG00015013672-7181.707Oryzias_latipes_hsok
ENSCANG00000040651MSI110085.366ENSOMEG00000017536MSI110082.317Oryzias_melastigma
ENSCANG00000040651MSI110086.280ENSOMEG00000002272-9786.280Oryzias_melastigma
ENSCANG00000040651MSI110099.094ENSOGAG00000003847MSI19899.094Otolemur_garnettii
ENSCANG00000040651MSI110096.049ENSOARG00000012097MSI110096.049Ovis_aries
ENSCANG00000040651MSI1100100.000ENSPPAG00000043073MSI1100100.000Pan_paniscus
ENSCANG00000040651MSI1100100.000ENSPPRG00000000370MSI198100.000Panthera_pardus
ENSCANG00000040651MSI199100.000ENSPTIG00000008913MSI1100100.000Panthera_tigris_altaica
ENSCANG00000040651MSI1100100.000ENSPTRG00000005531MSI198100.000Pan_troglodytes
ENSCANG00000040651MSI110099.695ENSPANG00000006335MSI19899.695Papio_anubis
ENSCANG00000040651MSI110085.976ENSPKIG00000016497MSI19485.976Paramormyrops_kingsleyae
ENSCANG00000040651MSI110085.366ENSPKIG00000023575-9485.366Paramormyrops_kingsleyae
ENSCANG00000040651MSI110091.768ENSPSIG00000011608-9391.768Pelodiscus_sinensis
ENSCANG00000040651MSI18892.576ENSPSIG00000009621-10092.576Pelodiscus_sinensis
ENSCANG00000040651MSI110069.697ENSPMGG00000007743-9168.182Periophthalmus_magnuspinnatus
ENSCANG00000040651MSI19680.952ENSPMGG00000000514MSI19780.952Periophthalmus_magnuspinnatus
ENSCANG00000040651MSI110099.695ENSPEMG00000010491Msi19399.695Peromyscus_maniculatus_bairdii
ENSCANG00000040651MSI110085.366ENSPFOG00000013113MSI19485.366Poecilia_formosa
ENSCANG00000040651MSI110085.366ENSPFOG00000008319-8185.366Poecilia_formosa
ENSCANG00000040651MSI110085.366ENSPLAG00000012431-9185.366Poecilia_latipinna
ENSCANG00000040651MSI110085.366ENSPLAG00000014025-9485.366Poecilia_latipinna
ENSCANG00000040651MSI110084.756ENSPMEG00000007025-9377.134Poecilia_mexicana
ENSCANG00000040651MSI110085.366ENSPMEG00000012796MSI19485.366Poecilia_mexicana
ENSCANG00000040651MSI16878.571ENSPREG00000014574-10078.571Poecilia_reticulata
ENSCANG00000040651MSI110082.317ENSPREG00000021416-9482.317Poecilia_reticulata
ENSCANG00000040651MSI1100100.000ENSPPYG00000005027MSI198100.000Pongo_abelii
ENSCANG00000040651MSI19976.923ENSPCAG00000002300MSI110076.923Procavia_capensis
ENSCANG00000040651MSI1100100.000ENSPCOG00000017341MSI198100.000Propithecus_coquereli
ENSCANG00000040651MSI110082.927ENSPVAG00000002225MSI110082.927Pteropus_vampyrus
ENSCANG00000040651MSI110084.756ENSPNYG00000004379MSI19484.756Pundamilia_nyererei
ENSCANG00000040651MSI110084.756ENSPNYG00000002529-9484.756Pundamilia_nyererei
ENSCANG00000040651MSI110083.537ENSPNAG00000019337msi19483.537Pygocentrus_nattereri
ENSCANG00000040651MSI19999.678ENSRNOG00000001156Msi110099.678Rattus_norvegicus
ENSCANG00000040651MSI1100100.000ENSRBIG00000036889MSI1100100.000Rhinopithecus_bieti
ENSCANG00000040651MSI1100100.000ENSRROG00000041076MSI193100.000Rhinopithecus_roxellana
ENSCANG00000040651MSI1100100.000ENSSBOG00000030259MSI198100.000Saimiri_boliviensis_boliviensis
ENSCANG00000040651MSI19987.255ENSSHAG00000006834MSI110087.255Sarcophilus_harrisii
ENSCANG00000040651MSI110087.500ENSSFOG00015005350MSI19687.500Scleropages_formosus
ENSCANG00000040651MSI110086.280ENSSFOG00015014964-9586.280Scleropages_formosus
ENSCANG00000040651MSI110082.012ENSSMAG00000018824MSI19782.012Scophthalmus_maximus
ENSCANG00000040651MSI19985.818ENSSMAG00000009156-7185.818Scophthalmus_maximus
ENSCANG00000040651MSI110085.061ENSSDUG00000022697-9485.061Seriola_dumerili
ENSCANG00000040651MSI110085.061ENSSDUG00000001027MSI19485.061Seriola_dumerili
ENSCANG00000040651MSI110085.061ENSSLDG00000016832MSI19485.061Seriola_lalandi_dorsalis
ENSCANG00000040651MSI110081.402ENSSLDG00000018706-9682.675Seriola_lalandi_dorsalis
ENSCANG00000040651MSI110095.427ENSSPUG00000015741MSI110095.427Sphenodon_punctatus
ENSCANG00000040651MSI110085.671ENSSPAG00000013098-10085.671Stegastes_partitus
ENSCANG00000040651MSI16868.750ENSSPAG00000014085-10068.750Stegastes_partitus
ENSCANG00000040651MSI110099.695ENSSSCG00000029365MSI110099.678Sus_scrofa
ENSCANG00000040651MSI110096.646ENSTGUG00000009534MSI110096.646Taeniopygia_guttata
ENSCANG00000040651MSI19080.952ENSTRUG00000016249MSI110073.783Takifugu_rubripes
ENSCANG00000040651MSI110075.915ENSTRUG00000015636-7975.915Takifugu_rubripes
ENSCANG00000040651MSI110060.819ENSTNIG00000019814-9560.819Tetraodon_nigroviridis
ENSCANG00000040651MSI110079.456ENSTNIG00000011469MSI19479.456Tetraodon_nigroviridis
ENSCANG00000040651MSI19989.377ENSTBEG00000007182MSI110089.377Tupaia_belangeri
ENSCANG00000040651MSI110080.793ENSTTRG00000005663MSI110080.793Tursiops_truncatus
ENSCANG00000040651MSI17192.694ENSUAMG00000015514MSI19492.694Ursus_americanus
ENSCANG00000040651MSI19992.405ENSUMAG00000006176MSI19092.405Ursus_maritimus
ENSCANG00000040651MSI1100100.000ENSVVUG00000020993MSI1100100.000Vulpes_vulpes
ENSCANG00000040651MSI110091.793ENSXETG00000012216msi19591.843Xenopus_tropicalis
ENSCANG00000040651MSI110070.732ENSXCOG00000017605MSI18970.732Xiphophorus_couchianus
ENSCANG00000040651MSI110085.366ENSXMAG00000027103MSI19578.723Xiphophorus_maculatus
ENSCANG00000040651MSI110085.061ENSXMAG00000018237-9485.061Xiphophorus_maculatus

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