EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCANG00000040711 (Gene tree)
Gene ID: 105519065
Gene Symbol: RPUSD3
Alias: MGC29784
Full Name: RNA pseudouridine synthase D3
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Minus strand
Length: 6945 bases
Position: chrKN982046.1:804781-811725
Accession: 105519065
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000034108	PseudoU_synth_2	PF00849.22	1.6e-20	1	1
ENSCANP00000034114	PseudoU_synth_2	PF00849.22	3.6e-19	1	1
ENSCANP00000034109	PseudoU_synth_2	PF00849.22	9.5e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000057343	RPUSD3-203	639	-	ENSCANP00000034114	212 (aa)	-	A0A2K5JZ56
ENSCANT00000057337	RPUSD3-201	1223	XM_011952253	ENSCANP00000034108	351 (aa)	XP_011807643	A0A2K5JZ19
ENSCANT00000057338	RPUSD3-202	1178	XM_011952254	ENSCANP00000034109	336 (aa)	XP_011807644	A0A2K5JZ52

Gene Model

Click here to download ENSCANG00000040711's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000040711's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCANG00000040711	RPUSD3	79	30.104	ENSCANG00000039684	RPUSD4	72	30.104

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000040711	RPUSD3	100	93.396	ENSG00000156990	RPUSD3	100	93.396	Homo_sapiens
ENSCANG00000040711	RPUSD3	100	80.114	ENSAMEG00000016227	RPUSD3	100	80.114	Ailuropoda_melanoleuca
ENSCANG00000040711	RPUSD3	83	57.386	ENSACAG00000009836	RPUSD3	81	57.042	Anolis_carolinensis
ENSCANG00000040711	RPUSD3	99	64.762	ENSANAG00000007127	-	100	64.762	Aotus_nancymaae
ENSCANG00000040711	RPUSD3	99	81.818	ENSANAG00000038118	-	98	81.818	Aotus_nancymaae
ENSCANG00000040711	RPUSD3	91	90.104	ENSANAG00000019945	-	79	90.306	Aotus_nancymaae
ENSCANG00000040711	RPUSD3	95	84.158	ENSBTAG00000007968	RPUSD3	100	81.105	Bos_taurus
ENSCANG00000040711	RPUSD3	100	79.261	ENSCAFG00000029733	RPUSD3	100	79.261	Canis_familiaris
ENSCANG00000040711	RPUSD3	100	79.261	ENSCAFG00020008582	RPUSD3	100	79.261	Canis_lupus_dingo
ENSCANG00000040711	RPUSD3	98	81.105	ENSCHIG00000026027	RPUSD3	100	81.105	Capra_hircus
ENSCANG00000040711	RPUSD3	99	80.896	ENSTSYG00000009994	RPUSD3	100	80.896	Carlito_syrichta
ENSCANG00000040711	RPUSD3	74	83.077	ENSCAPG00000017559	RPUSD3	98	83.077	Cavia_aperea
ENSCANG00000040711	RPUSD3	90	74.242	ENSCPOG00000037956	RPUSD3	86	77.049	Cavia_porcellus
ENSCANG00000040711	RPUSD3	100	90.094	ENSCCAG00000029530	RPUSD3	100	90.094	Cebus_capucinus
ENSCANG00000040711	RPUSD3	100	97.642	ENSCATG00000036939	RPUSD3	100	97.642	Cercocebus_atys
ENSCANG00000040711	RPUSD3	100	96.011	ENSCSAG00000010506	RPUSD3	100	96.011	Chlorocebus_sabaeus
ENSCANG00000040711	RPUSD3	53	85.714	ENSCHOG00000010151	-	67	85.714	Choloepus_hoffmanni
ENSCANG00000040711	RPUSD3	73	55.466	ENSCPBG00000008825	RPUSD3	95	55.642	Chrysemys_picta_bellii
ENSCANG00000040711	RPUSD3	95	73.887	ENSCGRG00001004923	Rpusd3	93	73.887	Cricetulus_griseus_chok1gshd
ENSCANG00000040711	RPUSD3	95	73.887	ENSCGRG00000018315	Rpusd3	98	73.887	Cricetulus_griseus_crigri
ENSCANG00000040711	RPUSD3	99	75.072	ENSDNOG00000039160	RPUSD3	92	75.072	Dasypus_novemcinctus
ENSCANG00000040711	RPUSD3	97	64.565	ENSDORG00000026827	Rpusd3	92	78.358	Dipodomys_ordii
ENSCANG00000040711	RPUSD3	100	71.591	ENSETEG00000006538	RPUSD3	99	71.591	Echinops_telfairi
ENSCANG00000040711	RPUSD3	81	36.782	ENSEBUG00000015605	RPUSD3	67	38.835	Eptatretus_burgeri
ENSCANG00000040711	RPUSD3	100	80.966	ENSEASG00005014160	RPUSD3	97	81.375	Equus_asinus_asinus
ENSCANG00000040711	RPUSD3	99	82.521	ENSECAG00000019988	RPUSD3	97	82.521	Equus_caballus
ENSCANG00000040711	RPUSD3	95	58.065	ENSEEUG00000007353	RPUSD3	96	58.065	Erinaceus_europaeus
ENSCANG00000040711	RPUSD3	100	80.114	ENSFCAG00000014199	RPUSD3	100	80.114	Felis_catus
ENSCANG00000040711	RPUSD3	77	49.451	ENSFALG00000012968	RPUSD3	99	46.886	Ficedula_albicollis
ENSCANG00000040711	RPUSD3	75	84.351	ENSFDAG00000008350	RPUSD3	81	84.351	Fukomys_damarensis
ENSCANG00000040711	RPUSD3	75	55.133	ENSGAGG00000007493	RPUSD3	82	56.061	Gopherus_agassizii
ENSCANG00000040711	RPUSD3	100	94.340	ENSGGOG00000013120	RPUSD3	100	94.340	Gorilla_gorilla
ENSCANG00000040711	RPUSD3	87	79.891	ENSHGLG00000011722	RPUSD3	97	68.966	Heterocephalus_glaber_female
ENSCANG00000040711	RPUSD3	87	79.891	ENSHGLG00100016038	RPUSD3	97	68.966	Heterocephalus_glaber_male
ENSCANG00000040711	RPUSD3	95	82.178	ENSSTOG00000002125	RPUSD3	99	77.077	Ictidomys_tridecemlineatus
ENSCANG00000040711	RPUSD3	95	74.272	ENSJJAG00000012679	Rpusd3	99	73.824	Jaculus_jaculus
ENSCANG00000040711	RPUSD3	98	80.233	ENSLAFG00000017501	RPUSD3	100	80.233	Loxodonta_africana
ENSCANG00000040711	RPUSD3	100	96.011	ENSMFAG00000032407	RPUSD3	100	96.011	Macaca_fascicularis
ENSCANG00000040711	RPUSD3	100	96.131	ENSMMUG00000010628	RPUSD3	100	96.131	Macaca_mulatta
ENSCANG00000040711	RPUSD3	100	95.726	ENSMNEG00000040308	RPUSD3	100	95.726	Macaca_nemestrina
ENSCANG00000040711	RPUSD3	100	98.113	ENSMLEG00000033940	RPUSD3	100	98.113	Mandrillus_leucophaeus
ENSCANG00000040711	RPUSD3	94	75.821	ENSMAUG00000015473	Rpusd3	97	75.821	Mesocricetus_auratus
ENSCANG00000040711	RPUSD3	99	82.938	ENSMICG00000002315	RPUSD3	100	81.977	Microcebus_murinus
ENSCANG00000040711	RPUSD3	95	73.887	ENSMOCG00000022613	Rpusd3	98	73.887	Microtus_ochrogaster
ENSCANG00000040711	RPUSD3	95	56.587	ENSMODG00000005210	RPUSD3	87	56.587	Monodelphis_domestica
ENSCANG00000040711	RPUSD3	98	72.384	MGP_CAROLIEiJ_G0028725	Rpusd3	100	72.384	Mus_caroli
ENSCANG00000040711	RPUSD3	98	72.965	ENSMUSG00000051169	Rpusd3	100	72.965	Mus_musculus
ENSCANG00000040711	RPUSD3	98	72.674	MGP_PahariEiJ_G0022476	Rpusd3	100	72.674	Mus_pahari
ENSCANG00000040711	RPUSD3	98	72.384	MGP_SPRETEiJ_G0029753	Rpusd3	100	72.384	Mus_spretus
ENSCANG00000040711	RPUSD3	99	77.364	ENSMPUG00000017132	RPUSD3	99	77.364	Mustela_putorius_furo
ENSCANG00000040711	RPUSD3	97	83.673	ENSMLUG00000006135	RPUSD3	99	83.673	Myotis_lucifugus
ENSCANG00000040711	RPUSD3	95	75.075	ENSNGAG00000023704	Rpusd3	97	75.075	Nannospalax_galili
ENSCANG00000040711	RPUSD3	100	94.340	ENSNLEG00000004214	RPUSD3	100	94.340	Nomascus_leucogenys
ENSCANG00000040711	RPUSD3	74	67.433	ENSMEUG00000013098	-	100	67.433	Notamacropus_eugenii
ENSCANG00000040711	RPUSD3	99	62.069	ENSOPRG00000002300	RPUSD3	99	62.069	Ochotona_princeps
ENSCANG00000040711	RPUSD3	74	81.609	ENSODEG00000018137	RPUSD3	90	81.609	Octodon_degus
ENSCANG00000040711	RPUSD3	84	53.371	ENSOANG00000012081	-	100	51.916	Ornithorhynchus_anatinus
ENSCANG00000040711	RPUSD3	89	79.365	ENSOCUG00000027885	RPUSD3	99	67.816	Oryctolagus_cuniculus
ENSCANG00000040711	RPUSD3	95	83.251	ENSOGAG00000012592	RPUSD3	99	83.974	Otolemur_garnettii
ENSCANG00000040711	RPUSD3	95	86.139	ENSOARG00000005928	RPUSD3	99	81.766	Ovis_aries
ENSCANG00000040711	RPUSD3	100	93.396	ENSPPAG00000038083	RPUSD3	100	93.396	Pan_paniscus
ENSCANG00000040711	RPUSD3	100	79.545	ENSPPRG00000024433	RPUSD3	100	79.545	Panthera_pardus
ENSCANG00000040711	RPUSD3	100	80.119	ENSPTIG00000006828	RPUSD3	100	80.814	Panthera_tigris_altaica
ENSCANG00000040711	RPUSD3	100	94.340	ENSPTRG00000051760	RPUSD3	100	94.340	Pan_troglodytes
ENSCANG00000040711	RPUSD3	100	98.113	ENSPANG00000023885	RPUSD3	100	98.113	Papio_anubis
ENSCANG00000040711	RPUSD3	98	72.965	ENSPEMG00000017245	Rpusd3	100	72.965	Peromyscus_maniculatus_bairdii
ENSCANG00000040711	RPUSD3	85	64.835	ENSPCIG00000021901	RPUSD3	84	64.483	Phascolarctos_cinereus
ENSCANG00000040711	RPUSD3	100	91.738	ENSPPYG00000013676	RPUSD3	100	91.738	Pongo_abelii
ENSCANG00000040711	RPUSD3	95	58.416	ENSPCAG00000013731	-	100	59.516	Procavia_capensis
ENSCANG00000040711	RPUSD3	100	85.227	ENSPCOG00000018314	RPUSD3	100	85.227	Propithecus_coquereli
ENSCANG00000040711	RPUSD3	100	79.830	ENSPVAG00000011107	RPUSD3	100	79.830	Pteropus_vampyrus
ENSCANG00000040711	RPUSD3	98	71.125	ENSRNOG00000009084	Rpusd3	100	71.125	Rattus_norvegicus
ENSCANG00000040711	RPUSD3	100	99.057	ENSRBIG00000041230	RPUSD3	100	99.057	Rhinopithecus_bieti
ENSCANG00000040711	RPUSD3	100	99.057	ENSRROG00000043328	RPUSD3	100	99.057	Rhinopithecus_roxellana
ENSCANG00000040711	RPUSD3	100	88.604	ENSSBOG00000036106	RPUSD3	100	88.604	Saimiri_boliviensis_boliviensis
ENSCANG00000040711	RPUSD3	89	60.847	ENSSHAG00000015536	RPUSD3	96	61.953	Sarcophilus_harrisii
ENSCANG00000040711	RPUSD3	100	79.261	ENSSSCG00000011555	RPUSD3	100	79.261	Sus_scrofa
ENSCANG00000040711	RPUSD3	73	46.452	ENSTGUG00000008744	RPUSD3	93	49.770	Taeniopygia_guttata
ENSCANG00000040711	RPUSD3	95	81.683	ENSTBEG00000000176	RPUSD3	100	78.201	Tupaia_belangeri
ENSCANG00000040711	RPUSD3	100	80.114	ENSTTRG00000007544	RPUSD3	100	80.114	Tursiops_truncatus
ENSCANG00000040711	RPUSD3	96	80.488	ENSUAMG00000011354	RPUSD3	97	82.051	Ursus_americanus
ENSCANG00000040711	RPUSD3	100	79.261	ENSUMAG00000018830	RPUSD3	100	79.261	Ursus_maritimus
ENSCANG00000040711	RPUSD3	99	80.660	ENSVVUG00000023735	RPUSD3	100	80.814	Vulpes_vulpes
ENSCANG00000040711	RPUSD3	81	49.711	ENSXETG00000023546	rpusd3	99	49.822	Xenopus_tropicalis