EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCANG00000041322 (Gene tree)
Gene ID: 105518755
Gene Symbol: RDM1
Alias: MGC33977|RAD52B
Full Name: RAD52 motif containing 1
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Minus strand
Length: 12703 bases
Position: chrKN981924.1:672909-685611
Accession: 105518755
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000035302	RRM_1	PF00076.22	4.8e-05	1	1
ENSCANP00000035294	RRM_1	PF00076.22	8.8e-05	1	1
ENSCANP00000035285	RRM_1	PF00076.22	0.00015	1	1
ENSCANP00000035292	RRM_1	PF00076.22	0.00018	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000058539	RDM1-204	1024	XM_011951871	ENSCANP00000035302	118 (aa)	XP_011807261	A0A2K5K2L4
ENSCANT00000058531	RDM1-203	805	XM_011951870	ENSCANP00000035294	166 (aa)	XP_011807260	A0A2K5K2F7
ENSCANT00000058522	RDM1-201	1078	XM_011951869	ENSCANP00000035285	251 (aa)	XP_011807259	A0A2K5K2H9
ENSCANT00000058529	RDM1-202	1159	XM_011951868	ENSCANP00000035292	284 (aa)	XP_011807258	A0A2K5K2K6

Gene Model

Click here to download ENSCANG00000041322's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000041322's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000041322	RDM1	100	95.783	ENSG00000278023	RDM1	100	95.783	Homo_sapiens
ENSCANG00000041322	RDM1	86	48.077	ENSAPOG00000021886	zgc:103564	84	33.913	Acanthochromis_polyacanthus
ENSCANG00000041322	RDM1	56	81.818	ENSAMEG00000019542	-	97	81.818	Ailuropoda_melanoleuca
ENSCANG00000041322	RDM1	86	48.544	ENSAPEG00000008929	zgc:103564	92	33.730	Amphiprion_percula
ENSCANG00000041322	RDM1	91	66.055	ENSAPLG00000004384	RDM1	94	53.036	Anas_platyrhynchos
ENSCANG00000041322	RDM1	86	61.386	ENSACAG00000012989	-	100	49.466	Anolis_carolinensis
ENSCANG00000041322	RDM1	100	93.373	ENSANAG00000032752	RDM1	100	93.373	Aotus_nancymaae
ENSCANG00000041322	RDM1	100	88.148	ENSBTAG00000000030	RDM1	100	79.649	Bos_taurus
ENSCANG00000041322	RDM1	95	91.071	ENSCJAG00000015031	RDM1	97	91.852	Callithrix_jacchus
ENSCANG00000041322	RDM1	90	81.132	ENSCAFG00000015160	-	100	73.828	Canis_familiaris
ENSCANG00000041322	RDM1	98	86.667	ENSCHIG00000020607	RDM1	100	79.433	Capra_hircus
ENSCANG00000041322	RDM1	100	69.366	ENSCPOG00000001495	-	99	69.366	Cavia_porcellus
ENSCANG00000041322	RDM1	96	88.235	ENSCCAG00000035763	RDM1	100	90.299	Cebus_capucinus
ENSCANG00000041322	RDM1	100	98.008	ENSCATG00000044451	RDM1	100	98.008	Cercocebus_atys
ENSCANG00000041322	RDM1	95	97.321	ENSCSAG00000006209	RDM1	100	92.857	Chlorocebus_sabaeus
ENSCANG00000041322	RDM1	87	69.903	ENSCPBG00000009105	RDM1	93	55.102	Chrysemys_picta_bellii
ENSCANG00000041322	RDM1	95	77.391	ENSCGRG00001015927	Rdm1	99	73.852	Cricetulus_griseus_chok1gshd
ENSCANG00000041322	RDM1	85	43.137	ENSCVAG00000001956	zgc:103564	96	36.330	Cyprinodon_variegatus
ENSCANG00000041322	RDM1	93	83.636	ENSDNOG00000045224	-	94	82.609	Dasypus_novemcinctus
ENSCANG00000041322	RDM1	90	89.623	ENSEASG00005010554	RDM1	69	80.412	Equus_asinus_asinus
ENSCANG00000041322	RDM1	90	88.679	ENSECAG00000022182	RDM1	91	80.784	Equus_caballus
ENSCANG00000041322	RDM1	86	81.188	ENSEEUG00000006127	RDM1	100	73.413	Erinaceus_europaeus
ENSCANG00000041322	RDM1	100	76.860	ENSFCAG00000043429	RDM1	97	85.185	Felis_catus
ENSCANG00000041322	RDM1	86	66.337	ENSGALG00000000243	RDM1	97	53.791	Gallus_gallus
ENSCANG00000041322	RDM1	86	71.287	ENSGAGG00000000293	-	78	54.217	Gopherus_agassizii
ENSCANG00000041322	RDM1	100	96.386	ENSGGOG00000010584	RDM1	100	96.386	Gorilla_gorilla
ENSCANG00000041322	RDM1	86	47.115	ENSHCOG00000002518	-	89	37.154	Hippocampus_comes
ENSCANG00000041322	RDM1	100	85.926	ENSSTOG00000022491	RDM1	100	82.394	Ictidomys_tridecemlineatus
ENSCANG00000041322	RDM1	100	78.671	ENSLAFG00000029300	RDM1	100	78.671	Loxodonta_africana
ENSCANG00000041322	RDM1	100	97.610	ENSMFAG00000032968	RDM1	100	97.610	Macaca_fascicularis
ENSCANG00000041322	RDM1	100	98.008	ENSMMUG00000006847	RDM1	100	98.008	Macaca_mulatta
ENSCANG00000041322	RDM1	100	97.610	ENSMNEG00000039977	RDM1	100	97.610	Macaca_nemestrina
ENSCANG00000041322	RDM1	100	97.590	ENSMLEG00000041158	RDM1	100	97.590	Mandrillus_leucophaeus
ENSCANG00000041322	RDM1	91	62.727	ENSMGAG00000008774	RDM1	96	55.102	Meleagris_gallopavo
ENSCANG00000041322	RDM1	99	78.519	ENSMAUG00000018559	Rdm1	99	73.239	Mesocricetus_auratus
ENSCANG00000041322	RDM1	100	90.370	ENSMICG00000038651	RDM1	100	89.130	Microcebus_murinus
ENSCANG00000041322	RDM1	95	73.913	ENSMOCG00000015095	Rdm1	99	69.203	Microtus_ochrogaster
ENSCANG00000041322	RDM1	94	71.930	ENSMODG00000011101	RDM1	100	63.768	Monodelphis_domestica
ENSCANG00000041322	RDM1	95	80.870	MGP_CAROLIEiJ_G0017226	Rdm1	99	72.792	Mus_caroli
ENSCANG00000041322	RDM1	95	80.000	ENSMUSG00000010362	Rdm1	99	72.857	Mus_musculus
ENSCANG00000041322	RDM1	99	82.222	MGP_PahariEiJ_G0018356	Rdm1	99	72.535	Mus_pahari
ENSCANG00000041322	RDM1	95	79.130	MGP_SPRETEiJ_G0018069	Rdm1	99	72.085	Mus_spretus
ENSCANG00000041322	RDM1	100	86.667	ENSMPUG00000008363	RDM1	100	80.420	Mustela_putorius_furo
ENSCANG00000041322	RDM1	100	95.783	ENSNLEG00000014173	RDM1	100	95.783	Nomascus_leucogenys
ENSCANG00000041322	RDM1	94	68.421	ENSMEUG00000015826	RDM1	95	67.373	Notamacropus_eugenii
ENSCANG00000041322	RDM1	95	79.130	ENSOCUG00000022704	RDM1	97	77.470	Oryctolagus_cuniculus
ENSCANG00000041322	RDM1	100	84.444	ENSOGAG00000011332	RDM1	100	83.451	Otolemur_garnettii
ENSCANG00000041322	RDM1	100	95.775	ENSPPAG00000029969	RDM1	100	95.775	Pan_paniscus
ENSCANG00000041322	RDM1	100	96.988	ENSPTRG00000009031	RDM1	100	96.988	Pan_troglodytes
ENSCANG00000041322	RDM1	100	97.610	ENSPANG00000022933	RDM1	100	97.610	Papio_anubis
ENSCANG00000041322	RDM1	95	75.652	ENSPEMG00000018985	Rdm1	99	72.183	Peromyscus_maniculatus_bairdii
ENSCANG00000041322	RDM1	100	94.366	ENSPPYG00000008198	RDM1	100	94.366	Pongo_abelii
ENSCANG00000041322	RDM1	100	85.926	ENSPCOG00000017995	RDM1	100	84.940	Propithecus_coquereli
ENSCANG00000041322	RDM1	95	82.609	ENSPVAG00000001116	RDM1	100	83.665	Pteropus_vampyrus
ENSCANG00000041322	RDM1	95	79.130	ENSRNOG00000020751	Rdm1	99	72.857	Rattus_norvegicus
ENSCANG00000041322	RDM1	100	97.590	ENSRBIG00000030000	RDM1	100	97.590	Rhinopithecus_bieti
ENSCANG00000041322	RDM1	100	97.610	ENSRROG00000035242	RDM1	100	97.610	Rhinopithecus_roxellana
ENSCANG00000041322	RDM1	97	65.942	ENSSHAG00000013584	RDM1	100	65.942	Sarcophilus_harrisii
ENSCANG00000041322	RDM1	93	62.727	ENSSPUG00000010941	RDM1	94	53.962	Sphenodon_punctatus
ENSCANG00000041322	RDM1	83	50.962	ENSSPAG00000011690	-	95	36.604	Stegastes_partitus
ENSCANG00000041322	RDM1	97	64.957	ENSSSCG00000017574	-	93	72.197	Sus_scrofa
ENSCANG00000041322	RDM1	86	84.158	ENSTBEG00000010030	RDM1	99	62.698	Tupaia_belangeri
ENSCANG00000041322	RDM1	100	86.667	ENSUAMG00000027279	RDM1	100	82.042	Ursus_americanus
ENSCANG00000041322	RDM1	100	86.667	ENSUMAG00000015423	RDM1	98	82.042	Ursus_maritimus