EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCANG00000041549 (Gene tree)
Gene ID: 105523454
Gene Symbol: TNRC6A
Alias: CAGH26|GW182|KIAA1460|TNRC6
Full Name: trinucleotide repeat containing 6A
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Plus strand
Length: 101850 bases
Position: chrKN983351.1:1048825-1150674
Accession: 105523454
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000035722	Ago_hook	PF10427.9	1.9e-19	1	1
ENSCANP00000035726	Ago_hook	PF10427.9	2.5e-19	1	1
ENSCANP00000035729	Ago_hook	PF10427.9	4.4e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000058964	TNRC6A-201	8425	XM_011958265	ENSCANP00000035722	1958 (aa)	XP_011813655	A0A2K5K3U9
ENSCANT00000058971	TNRC6A-203	5814	-	ENSCANP00000035729	1937 (aa)	-	A0A2K5K3N7
ENSCANT00000058968	TNRC6A-202	5730	XM_011958266	ENSCANP00000035726	1909 (aa)	XP_011813656	A0A2K5K3P5

Gene Model

Click here to download ENSCANG00000041549's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000041549's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCANG00000041549	TNRC6A	97	40.314	ENSCANG00000030776	TNRC6B	94	46.541
ENSCANG00000041549	TNRC6A	97	49.704	ENSCANG00000041771	TNRC6C	98	44.407

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000041549	TNRC6A	100	99.032	ENSG00000090905	TNRC6A	100	99.032	Homo_sapiens
ENSCANG00000041549	TNRC6A	98	96.816	ENSAMEG00000009333	TNRC6A	100	96.816	Ailuropoda_melanoleuca
ENSCANG00000041549	TNRC6A	97	82.046	ENSAPLG00000009978	TNRC6A	100	82.046	Anas_platyrhynchos
ENSCANG00000041549	TNRC6A	100	54.669	ENSACAG00000011857	TNRC6A	100	56.655	Anolis_carolinensis
ENSCANG00000041549	TNRC6A	100	98.979	ENSANAG00000025252	TNRC6A	100	98.979	Aotus_nancymaae
ENSCANG00000041549	TNRC6A	91	56.365	ENSAMXG00000019919	tnrc6a	99	56.935	Astyanax_mexicanus
ENSCANG00000041549	TNRC6A	100	95.862	ENSBTAG00000017999	TNRC6A	100	95.862	Bos_taurus
ENSCANG00000041549	TNRC6A	100	98.730	ENSCJAG00000020677	TNRC6A	100	98.730	Callithrix_jacchus
ENSCANG00000041549	TNRC6A	99	96.835	ENSCAFG00000017531	TNRC6A	100	96.835	Canis_familiaris
ENSCANG00000041549	TNRC6A	98	94.688	ENSCAFG00020021160	TNRC6A	99	95.176	Canis_lupus_dingo
ENSCANG00000041549	TNRC6A	100	95.181	ENSCHIG00000019448	TNRC6A	100	94.814	Capra_hircus
ENSCANG00000041549	TNRC6A	100	96.937	ENSTSYG00000012711	TNRC6A	100	96.937	Carlito_syrichta
ENSCANG00000041549	TNRC6A	99	96.382	ENSCPOG00000036684	TNRC6A	100	96.382	Cavia_porcellus
ENSCANG00000041549	TNRC6A	100	99.031	ENSCCAG00000033664	TNRC6A	100	99.031	Cebus_capucinus
ENSCANG00000041549	TNRC6A	99	99.212	ENSCATG00000019284	TNRC6A	99	99.212	Cercocebus_atys
ENSCANG00000041549	TNRC6A	100	91.985	ENSCLAG00000010217	TNRC6A	100	91.985	Chinchilla_lanigera
ENSCANG00000041549	TNRC6A	100	99.439	ENSCSAG00000006561	TNRC6A	100	99.439	Chlorocebus_sabaeus
ENSCANG00000041549	TNRC6A	95	91.763	ENSCHOG00000009374	TNRC6A	95	91.763	Choloepus_hoffmanni
ENSCANG00000041549	TNRC6A	90	82.390	ENSCPBG00000001881	TNRC6A	99	82.390	Chrysemys_picta_bellii
ENSCANG00000041549	TNRC6A	100	94.921	ENSCGRG00001015021	Tnrc6a	100	94.921	Cricetulus_griseus_chok1gshd
ENSCANG00000041549	TNRC6A	99	93.973	ENSCGRG00000013351	Tnrc6a	99	93.763	Cricetulus_griseus_crigri
ENSCANG00000041549	TNRC6A	91	56.474	ENSDARG00000079688	tnrc6a	99	57.071	Danio_rerio
ENSCANG00000041549	TNRC6A	98	93.890	ENSDNOG00000013989	TNRC6A	99	93.890	Dasypus_novemcinctus
ENSCANG00000041549	TNRC6A	98	85.654	ENSETEG00000014658	TNRC6A	99	85.602	Echinops_telfairi
ENSCANG00000041549	TNRC6A	100	96.682	ENSEASG00005017693	TNRC6A	100	97.057	Equus_asinus_asinus
ENSCANG00000041549	TNRC6A	100	96.682	ENSECAG00000025056	TNRC6A	100	97.057	Equus_caballus
ENSCANG00000041549	TNRC6A	98	89.556	ENSEEUG00000004530	TNRC6A	99	89.556	Erinaceus_europaeus
ENSCANG00000041549	TNRC6A	100	96.016	ENSFCAG00000025236	TNRC6A	100	96.016	Felis_catus
ENSCANG00000041549	TNRC6A	99	78.992	ENSFALG00000003757	TNRC6A	99	79.990	Ficedula_albicollis
ENSCANG00000041549	TNRC6A	90	82.421	ENSGALG00000006068	TNRC6A	99	82.824	Gallus_gallus
ENSCANG00000041549	TNRC6A	90	81.599	ENSGAGG00000023209	TNRC6A	99	81.886	Gopherus_agassizii
ENSCANG00000041549	TNRC6A	99	98.870	ENSGGOG00000005137	TNRC6A	99	98.870	Gorilla_gorilla
ENSCANG00000041549	TNRC6A	94	75.181	ENSHGLG00000007368	-	99	72.042	Heterocephalus_glaber_female
ENSCANG00000041549	TNRC6A	99	94.167	ENSHGLG00000012474	-	100	94.220	Heterocephalus_glaber_female
ENSCANG00000041549	TNRC6A	99	93.747	ENSHGLG00100012496	-	100	93.642	Heterocephalus_glaber_male
ENSCANG00000041549	TNRC6A	99	96.183	ENSSTOG00000023394	TNRC6A	99	96.183	Ictidomys_tridecemlineatus
ENSCANG00000041549	TNRC6A	97	69.783	ENSLACG00000006277	TNRC6A	100	70.455	Latimeria_chalumnae
ENSCANG00000041549	TNRC6A	99	83.223	ENSLOCG00000005517	tnrc6a	93	83.223	Lepisosteus_oculatus
ENSCANG00000041549	TNRC6A	98	94.686	ENSLAFG00000004209	TNRC6A	99	94.791	Loxodonta_africana
ENSCANG00000041549	TNRC6A	99	97.677	ENSMFAG00000003824	TNRC6A	100	97.677	Macaca_fascicularis
ENSCANG00000041549	TNRC6A	100	99.187	ENSMMUG00000020428	TNRC6A	100	99.187	Macaca_mulatta
ENSCANG00000041549	TNRC6A	100	99.136	ENSMNEG00000034854	TNRC6A	100	99.136	Macaca_nemestrina
ENSCANG00000041549	TNRC6A	100	95.514	ENSMLEG00000042737	TNRC6A	99	95.514	Mandrillus_leucophaeus
ENSCANG00000041549	TNRC6A	99	79.899	ENSMGAG00000006455	TNRC6A	99	80.384	Meleagris_gallopavo
ENSCANG00000041549	TNRC6A	100	94.660	ENSMAUG00000012750	Tnrc6a	100	94.660	Mesocricetus_auratus
ENSCANG00000041549	TNRC6A	100	97.808	ENSMICG00000030685	TNRC6A	100	97.808	Microcebus_murinus
ENSCANG00000041549	TNRC6A	100	95.076	ENSMOCG00000000152	Tnrc6a	100	94.814	Microtus_ochrogaster
ENSCANG00000041549	TNRC6A	99	80.924	ENSMODG00000016348	TNRC6A	99	82.067	Monodelphis_domestica
ENSCANG00000041549	TNRC6A	99	93.340	MGP_CAROLIEiJ_G0030425	Tnrc6a	100	94.711	Mus_caroli
ENSCANG00000041549	TNRC6A	100	94.081	ENSMUSG00000052707	Tnrc6a	99	95.068	Mus_musculus
ENSCANG00000041549	TNRC6A	99	94.083	MGP_PahariEiJ_G0013635	Tnrc6a	100	95.354	Mus_pahari
ENSCANG00000041549	TNRC6A	100	94.076	MGP_SPRETEiJ_G0031539	Tnrc6a	100	95.068	Mus_spretus
ENSCANG00000041549	TNRC6A	97	84.570	ENSMPUG00000012324	TNRC6A	100	84.355	Mustela_putorius_furo
ENSCANG00000041549	TNRC6A	97	93.277	ENSMLUG00000002701	TNRC6A	100	93.277	Myotis_lucifugus
ENSCANG00000041549	TNRC6A	99	95.597	ENSNGAG00000020702	Tnrc6a	100	95.964	Nannospalax_galili
ENSCANG00000041549	TNRC6A	99	96.344	ENSNLEG00000011851	TNRC6A	99	96.344	Nomascus_leucogenys
ENSCANG00000041549	TNRC6A	77	89.258	ENSMEUG00000015959	-	77	89.258	Notamacropus_eugenii
ENSCANG00000041549	TNRC6A	96	99.627	ENSOPRG00000005819	TNRC6A	96	99.627	Ochotona_princeps
ENSCANG00000041549	TNRC6A	99	89.905	ENSODEG00000012802	TNRC6A	99	89.641	Octodon_degus
ENSCANG00000041549	TNRC6A	87	83.256	ENSOANG00000007672	TNRC6A	99	83.256	Ornithorhynchus_anatinus
ENSCANG00000041549	TNRC6A	97	93.333	ENSOCUG00000004325	TNRC6A	100	93.228	Oryctolagus_cuniculus
ENSCANG00000041549	TNRC6A	99	97.324	ENSOGAG00000006666	TNRC6A	100	97.324	Otolemur_garnettii
ENSCANG00000041549	TNRC6A	99	94.405	ENSOARG00000017950	TNRC6A	100	94.045	Ovis_aries
ENSCANG00000041549	TNRC6A	99	98.728	ENSPPAG00000028379	TNRC6A	100	98.779	Pan_paniscus
ENSCANG00000041549	TNRC6A	100	96.016	ENSPPRG00000005861	TNRC6A	100	96.016	Panthera_pardus
ENSCANG00000041549	TNRC6A	99	94.697	ENSPTIG00000006346	TNRC6A	99	94.697	Panthera_tigris_altaica
ENSCANG00000041549	TNRC6A	99	97.086	ENSPTRG00000007898	TNRC6A	99	97.086	Pan_troglodytes
ENSCANG00000041549	TNRC6A	100	97.048	ENSPANG00000018523	TNRC6A	100	97.048	Papio_anubis
ENSCANG00000041549	TNRC6A	87	75.862	ENSPKIG00000012859	tnrc6a	96	79.459	Paramormyrops_kingsleyae
ENSCANG00000041549	TNRC6A	77	77.635	ENSPSIG00000003965	TNRC6A	100	77.635	Pelodiscus_sinensis
ENSCANG00000041549	TNRC6A	100	94.552	ENSPEMG00000016318	Tnrc6a	100	94.756	Peromyscus_maniculatus_bairdii
ENSCANG00000041549	TNRC6A	97	83.778	ENSPCIG00000012106	TNRC6A	100	83.987	Phascolarctos_cinereus
ENSCANG00000041549	TNRC6A	99	98.522	ENSPPYG00000007202	TNRC6A	100	98.522	Pongo_abelii
ENSCANG00000041549	TNRC6A	95	100.000	ENSPCAG00000008260	TNRC6A	94	100.000	Procavia_capensis
ENSCANG00000041549	TNRC6A	100	95.512	ENSPCOG00000010134	TNRC6A	100	95.512	Propithecus_coquereli
ENSCANG00000041549	TNRC6A	89	71.347	ENSPVAG00000012066	TNRC6A	99	71.232	Pteropus_vampyrus
ENSCANG00000041549	TNRC6A	100	94.001	ENSRNOG00000024737	Tnrc6a	100	94.053	Rattus_norvegicus
ENSCANG00000041549	TNRC6A	99	99.586	ENSRBIG00000014222	TNRC6A	100	99.586	Rhinopithecus_bieti
ENSCANG00000041549	TNRC6A	100	99.642	ENSRROG00000032360	TNRC6A	100	99.642	Rhinopithecus_roxellana
ENSCANG00000041549	TNRC6A	98	98.168	ENSSBOG00000036197	TNRC6A	100	99.473	Saimiri_boliviensis_boliviensis
ENSCANG00000041549	TNRC6A	90	83.818	ENSSHAG00000008811	TNRC6A	99	84.274	Sarcophilus_harrisii
ENSCANG00000041549	TNRC6A	87	67.365	ENSSFOG00015008920	tnrc6a	99	63.910	Scleropages_formosus
ENSCANG00000041549	TNRC6A	72	84.058	ENSSARG00000002479	TNRC6A	89	83.333	Sorex_araneus
ENSCANG00000041549	TNRC6A	90	78.891	ENSSPUG00000010525	TNRC6A	100	78.891	Sphenodon_punctatus
ENSCANG00000041549	TNRC6A	100	96.347	ENSSSCG00000038870	TNRC6A	100	97.776	Sus_scrofa
ENSCANG00000041549	TNRC6A	99	79.729	ENSTGUG00000006142	TNRC6A	100	80.302	Taeniopygia_guttata
ENSCANG00000041549	TNRC6A	98	94.828	ENSTBEG00000014965	TNRC6A	100	94.828	Tupaia_belangeri
ENSCANG00000041549	TNRC6A	94	98.058	ENSTTRG00000002008	TNRC6A	93	98.058	Tursiops_truncatus
ENSCANG00000041549	TNRC6A	79	95.745	ENSUAMG00000006656	-	93	95.745	Ursus_americanus
ENSCANG00000041549	TNRC6A	98	95.532	ENSUMAG00000008274	TNRC6A	100	97.590	Ursus_maritimus
ENSCANG00000041549	TNRC6A	51	97.273	ENSVPAG00000010764	-	52	97.273	Vicugna_pacos
ENSCANG00000041549	TNRC6A	99	96.861	ENSVVUG00000005380	TNRC6A	100	96.844	Vulpes_vulpes
ENSCANG00000041549	TNRC6A	94	65.968	ENSXETG00000030437	TNRC6A	99	66.235	Xenopus_tropicalis