EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCANG00000041771 (Gene tree)
Gene ID: 105520338
Gene Symbol: TNRC6C
Alias: FLJ20015|KIAA1582
Full Name: trinucleotide repeat containing 6C
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Plus strand
Length: 110901 bases
Position: chrKN979384.1:14134221-14245121
Accession: 105520338
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000036164	Ago_hook	PF10427.9	5.3e-22	1	1
ENSCANP00000036174	Ago_hook	PF10427.9	5.5e-22	1	1
ENSCANP00000036172	Ago_hook	PF10427.9	5.9e-22	1	1
ENSCANP00000036178	Ago_hook	PF10427.9	1e-21	1	1
ENSCANP00000036174	RRM_1	PF00076.22	0.00031	1	1
ENSCANP00000036172	RRM_1	PF00076.22	0.00031	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000059413	TNRC6C-201	5823	-	ENSCANP00000036164	1940 (aa)	-	A0A2K5K4Y8
ENSCANT00000059427	TNRC6C-204	5817	-	ENSCANP00000036178	1938 (aa)	-	A0A2K5K4Y7
ENSCANT00000059421	TNRC6C-202	9698	XM_011954035	ENSCANP00000036172	1722 (aa)	XP_011809425	A0A2K5K532
ENSCANT00000059423	TNRC6C-203	9590	XM_011954117	ENSCANP00000036174	1686 (aa)	XP_011809507	A0A2K5K4Z9

Gene Model

Click here to download ENSCANG00000041771's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000041771's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCANG00000041771	TNRC6C	98	37.457	ENSCANG00000030776	TNRC6B	90	54.054
ENSCANG00000041771	TNRC6C	98	44.407	ENSCANG00000041549	TNRC6A	97	49.704

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000041771	TNRC6C	100	98.611	ENSG00000078687	TNRC6C	100	100.000	Homo_sapiens
ENSCANG00000041771	TNRC6C	80	54.689	ENSAPOG00000019749	tnrc6c1	98	49.210	Acanthochromis_polyacanthus
ENSCANG00000041771	TNRC6C	100	89.245	ENSAMEG00000013756	TNRC6C	99	88.846	Ailuropoda_melanoleuca
ENSCANG00000041771	TNRC6C	91	52.974	ENSACIG00000008075	tnrc6c1	79	54.646	Amphilophus_citrinellus
ENSCANG00000041771	TNRC6C	77	69.120	ENSAOCG00000023968	tnrc6c1	99	49.155	Amphiprion_ocellaris
ENSCANG00000041771	TNRC6C	80	54.405	ENSAPEG00000009020	tnrc6c1	99	49.053	Amphiprion_percula
ENSCANG00000041771	TNRC6C	100	86.648	ENSAPLG00000005456	TNRC6C	100	86.113	Anas_platyrhynchos
ENSCANG00000041771	TNRC6C	100	87.500	ENSACAG00000016198	TNRC6C	98	86.250	Anolis_carolinensis
ENSCANG00000041771	TNRC6C	100	97.633	ENSANAG00000021554	TNRC6C	100	97.633	Aotus_nancymaae
ENSCANG00000041771	TNRC6C	100	49.445	ENSACLG00000000424	tnrc6c1	79	53.533	Astatotilapia_calliptera
ENSCANG00000041771	TNRC6C	97	90.961	ENSBTAG00000018658	TNRC6C	100	88.009	Bos_taurus
ENSCANG00000041771	TNRC6C	100	97.530	ENSCJAG00000019431	TNRC6C	100	97.530	Callithrix_jacchus
ENSCANG00000041771	TNRC6C	100	91.257	ENSCAFG00000005224	TNRC6C	99	90.791	Canis_familiaris
ENSCANG00000041771	TNRC6C	100	90.893	ENSCAFG00020006661	TNRC6C	99	91.184	Canis_lupus_dingo
ENSCANG00000041771	TNRC6C	97	90.806	ENSCHIG00000026004	TNRC6C	100	85.882	Capra_hircus
ENSCANG00000041771	TNRC6C	100	95.536	ENSTSYG00000005403	TNRC6C	100	95.536	Carlito_syrichta
ENSCANG00000041771	TNRC6C	100	84.412	ENSCAPG00000007307	TNRC6C	99	83.552	Cavia_aperea
ENSCANG00000041771	TNRC6C	100	89.698	ENSCPOG00000000467	TNRC6C	100	87.773	Cavia_porcellus
ENSCANG00000041771	TNRC6C	100	97.855	ENSCCAG00000030524	TNRC6C	100	97.855	Cebus_capucinus
ENSCANG00000041771	TNRC6C	100	99.125	ENSCATG00000033135	TNRC6C	100	99.125	Cercocebus_atys
ENSCANG00000041771	TNRC6C	100	92.599	ENSCLAG00000011139	TNRC6C	99	89.948	Chinchilla_lanigera
ENSCANG00000041771	TNRC6C	100	98.957	ENSCSAG00000005167	TNRC6C	100	98.610	Chlorocebus_sabaeus
ENSCANG00000041771	TNRC6C	75	92.051	ENSCHOG00000000088	TNRC6C	72	91.172	Choloepus_hoffmanni
ENSCANG00000041771	TNRC6C	100	88.009	ENSCPBG00000027960	TNRC6C	100	87.537	Chrysemys_picta_bellii
ENSCANG00000041771	TNRC6C	100	89.511	ENSCGRG00001022686	Tnrc6c	100	88.332	Cricetulus_griseus_chok1gshd
ENSCANG00000041771	TNRC6C	100	89.935	ENSCGRG00000018041	Tnrc6c	100	88.332	Cricetulus_griseus_crigri
ENSCANG00000041771	TNRC6C	80	52.851	ENSCSEG00000012744	tnrc6c1	98	45.526	Cynoglossus_semilaevis
ENSCANG00000041771	TNRC6C	100	54.432	ENSDARG00000076847	tnrc6c1	99	54.323	Danio_rerio
ENSCANG00000041771	TNRC6C	100	91.093	ENSDNOG00000003247	TNRC6C	99	88.825	Dasypus_novemcinctus
ENSCANG00000041771	TNRC6C	100	85.580	ENSDORG00000004558	Tnrc6c	100	85.344	Dipodomys_ordii
ENSCANG00000041771	TNRC6C	90	83.130	ENSETEG00000005527	TNRC6C	86	83.715	Echinops_telfairi
ENSCANG00000041771	TNRC6C	100	90.888	ENSEASG00005004799	TNRC6C	100	90.947	Equus_asinus_asinus
ENSCANG00000041771	TNRC6C	100	91.020	ENSECAG00000012486	TNRC6C	99	90.292	Equus_caballus
ENSCANG00000041771	TNRC6C	96	90.573	ENSEEUG00000010008	TNRC6C	96	91.201	Erinaceus_europaeus
ENSCANG00000041771	TNRC6C	100	88.955	ENSFCAG00000028358	TNRC6C	100	88.895	Felis_catus
ENSCANG00000041771	TNRC6C	100	86.784	ENSFALG00000000848	TNRC6C	100	86.047	Ficedula_albicollis
ENSCANG00000041771	TNRC6C	100	91.060	ENSFDAG00000010368	TNRC6C	100	89.400	Fukomys_damarensis
ENSCANG00000041771	TNRC6C	89	70.675	ENSFHEG00000002936	tnrc6c1	99	45.891	Fundulus_heteroclitus
ENSCANG00000041771	TNRC6C	100	88.644	ENSGALG00000001725	TNRC6C	100	88.166	Gallus_gallus
ENSCANG00000041771	TNRC6C	100	48.868	ENSGAFG00000019019	tnrc6c1	100	49.172	Gambusia_affinis
ENSCANG00000041771	TNRC6C	95	52.701	ENSGACG00000012320	tnrc6c1	97	48.016	Gasterosteus_aculeatus
ENSCANG00000041771	TNRC6C	100	87.861	ENSGAGG00000022043	TNRC6C	99	87.045	Gopherus_agassizii
ENSCANG00000041771	TNRC6C	100	97.942	ENSGGOG00000011304	TNRC6C	100	97.942	Gorilla_gorilla
ENSCANG00000041771	TNRC6C	100	49.553	ENSHBUG00000010846	tnrc6c1	85	51.970	Haplochromis_burtoni
ENSCANG00000041771	TNRC6C	100	92.126	ENSHGLG00000004809	TNRC6C	99	89.381	Heterocephalus_glaber_female
ENSCANG00000041771	TNRC6C	100	91.102	ENSHGLG00100012597	TNRC6C	99	89.537	Heterocephalus_glaber_male
ENSCANG00000041771	TNRC6C	99	50.910	ENSIPUG00000000818	tnrc6c1	98	51.555	Ictalurus_punctatus
ENSCANG00000041771	TNRC6C	100	90.893	ENSSTOG00000009101	TNRC6C	100	88.571	Ictidomys_tridecemlineatus
ENSCANG00000041771	TNRC6C	100	88.450	ENSJJAG00000017055	Tnrc6c	99	86.681	Jaculus_jaculus
ENSCANG00000041771	TNRC6C	99	47.958	ENSKMAG00000021023	tnrc6c1	100	50.635	Kryptolebias_marmoratus
ENSCANG00000041771	TNRC6C	100	75.015	ENSLACG00000015283	TNRC6C	100	73.915	Latimeria_chalumnae
ENSCANG00000041771	TNRC6C	99	56.529	ENSLOCG00000013377	tnrc6c1	99	55.404	Lepisosteus_oculatus
ENSCANG00000041771	TNRC6C	100	90.513	ENSLAFG00000011122	TNRC6C	99	88.750	Loxodonta_africana
ENSCANG00000041771	TNRC6C	100	99.130	ENSMFAG00000043943	TNRC6C	100	99.130	Macaca_fascicularis
ENSCANG00000041771	TNRC6C	100	99.130	ENSMMUG00000011924	TNRC6C	100	99.112	Macaca_mulatta
ENSCANG00000041771	TNRC6C	100	99.177	ENSMNEG00000030405	TNRC6C	100	99.177	Macaca_nemestrina
ENSCANG00000041771	TNRC6C	100	99.177	ENSMLEG00000033436	TNRC6C	100	99.177	Mandrillus_leucophaeus
ENSCANG00000041771	TNRC6C	94	54.704	ENSMAMG00000023613	tnrc6c1	100	51.481	Mastacembelus_armatus
ENSCANG00000041771	TNRC6C	100	49.445	ENSMZEG00005010920	tnrc6c1	79	53.533	Maylandia_zebra
ENSCANG00000041771	TNRC6C	100	79.725	ENSMGAG00000003906	TNRC6C	100	80.196	Meleagris_gallopavo
ENSCANG00000041771	TNRC6C	100	89.275	ENSMAUG00000021618	Tnrc6c	100	89.216	Mesocricetus_auratus
ENSCANG00000041771	TNRC6C	100	94.145	ENSMICG00000003952	TNRC6C	100	94.029	Microcebus_murinus
ENSCANG00000041771	TNRC6C	100	91.593	ENSMOCG00000015879	Tnrc6c	100	89.119	Microtus_ochrogaster
ENSCANG00000041771	TNRC6C	79	55.971	ENSMMOG00000005203	tnrc6c1	100	50.593	Mola_mola
ENSCANG00000041771	TNRC6C	100	86.765	ENSMODG00000001785	TNRC6C	99	84.867	Monodelphis_domestica
ENSCANG00000041771	TNRC6C	100	90.941	MGP_CAROLIEiJ_G0017465	Tnrc6c	100	88.503	Mus_caroli
ENSCANG00000041771	TNRC6C	100	90.705	ENSMUSG00000025571	Tnrc6c	100	88.278	Mus_musculus
ENSCANG00000041771	TNRC6C	100	90.764	MGP_PahariEiJ_G0018593	Tnrc6c	100	88.334	Mus_pahari
ENSCANG00000041771	TNRC6C	100	90.764	MGP_SPRETEiJ_G0018309	Tnrc6c	100	88.334	Mus_spretus
ENSCANG00000041771	TNRC6C	100	88.651	ENSMPUG00000013348	TNRC6C	98	88.293	Mustela_putorius_furo
ENSCANG00000041771	TNRC6C	100	82.360	ENSMLUG00000014431	TNRC6C	98	81.944	Myotis_lucifugus
ENSCANG00000041771	TNRC6C	100	90.395	ENSNGAG00000012203	Tnrc6c	99	88.854	Nannospalax_galili
ENSCANG00000041771	TNRC6C	100	50.112	ENSNBRG00000005344	tnrc6c1	79	54.527	Neolamprologus_brichardi
ENSCANG00000041771	TNRC6C	100	95.326	ENSNLEG00000000047	TNRC6C	99	95.204	Nomascus_leucogenys
ENSCANG00000041771	TNRC6C	97	81.333	ENSMEUG00000005104	TNRC6C	99	90.104	Notamacropus_eugenii
ENSCANG00000041771	TNRC6C	100	91.533	ENSODEG00000012499	TNRC6C	100	91.711	Octodon_degus
ENSCANG00000041771	TNRC6C	94	51.430	ENSONIG00000002210	tnrc6c1	96	52.326	Oreochromis_niloticus
ENSCANG00000041771	TNRC6C	99	63.594	ENSOANG00000009758	-	100	61.151	Ornithorhynchus_anatinus
ENSCANG00000041771	TNRC6C	81	88.070	ENSOCUG00000006122	TNRC6C	95	77.778	Oryctolagus_cuniculus
ENSCANG00000041771	TNRC6C	92	50.245	ENSORLG00000009837	tnrc6c1	100	67.286	Oryzias_latipes
ENSCANG00000041771	TNRC6C	92	50.184	ENSORLG00020016510	tnrc6c1	100	49.335	Oryzias_latipes_hni
ENSCANG00000041771	TNRC6C	72	45.227	ENSORLG00015000171	tnrc6c1	98	44.851	Oryzias_latipes_hsok
ENSCANG00000041771	TNRC6C	92	51.050	ENSOMEG00000000357	tnrc6c1	99	48.121	Oryzias_melastigma
ENSCANG00000041771	TNRC6C	100	92.754	ENSOGAG00000007197	TNRC6C	100	92.754	Otolemur_garnettii
ENSCANG00000041771	TNRC6C	96	84.564	ENSOARG00000006041	TNRC6C	97	84.779	Ovis_aries
ENSCANG00000041771	TNRC6C	100	98.551	ENSPPAG00000027160	TNRC6C	100	98.551	Pan_paniscus
ENSCANG00000041771	TNRC6C	100	88.955	ENSPPRG00000018881	TNRC6C	100	88.895	Panthera_pardus
ENSCANG00000041771	TNRC6C	90	84.716	ENSPTIG00000008791	TNRC6C	68	96.726	Panthera_tigris_altaica
ENSCANG00000041771	TNRC6C	100	98.559	ENSPTRG00000009699	TNRC6C	100	98.559	Pan_troglodytes
ENSCANG00000041771	TNRC6C	100	99.177	ENSPANG00000019994	TNRC6C	100	99.177	Papio_anubis
ENSCANG00000041771	TNRC6C	96	52.897	ENSPKIG00000005428	tnrc6c1	100	51.411	Paramormyrops_kingsleyae
ENSCANG00000041771	TNRC6C	100	86.162	ENSPSIG00000018069	TNRC6C	100	83.557	Pelodiscus_sinensis
ENSCANG00000041771	TNRC6C	79	54.624	ENSPMGG00000022911	tnrc6c1	97	62.857	Periophthalmus_magnuspinnatus
ENSCANG00000041771	TNRC6C	100	90.689	ENSPEMG00000009785	Tnrc6c	100	88.273	Peromyscus_maniculatus_bairdii
ENSCANG00000041771	TNRC6C	57	85.128	ENSPCIG00000017421	-	99	84.979	Phascolarctos_cinereus
ENSCANG00000041771	TNRC6C	100	48.681	ENSPFOG00000012560	tnrc6c1	97	57.427	Poecilia_formosa
ENSCANG00000041771	TNRC6C	100	50.140	ENSPLAG00000021055	tnrc6c1	100	50.056	Poecilia_latipinna
ENSCANG00000041771	TNRC6C	100	98.783	ENSPPYG00000008679	TNRC6C	99	98.353	Pongo_abelii
ENSCANG00000041771	TNRC6C	93	92.891	ENSPCAG00000012510	TNRC6C	91	92.891	Procavia_capensis
ENSCANG00000041771	TNRC6C	100	94.667	ENSPCOG00000021451	TNRC6C	100	94.667	Propithecus_coquereli
ENSCANG00000041771	TNRC6C	96	88.983	ENSPVAG00000002008	TNRC6C	95	88.983	Pteropus_vampyrus
ENSCANG00000041771	TNRC6C	100	49.221	ENSPNYG00000014477	tnrc6c1	85	51.726	Pundamilia_nyererei
ENSCANG00000041771	TNRC6C	100	90.183	ENSRNOG00000022395	Tnrc6c	100	90.183	Rattus_norvegicus
ENSCANG00000041771	TNRC6C	100	99.188	ENSRBIG00000027777	TNRC6C	100	99.188	Rhinopithecus_bieti
ENSCANG00000041771	TNRC6C	100	99.331	ENSRROG00000042912	TNRC6C	100	99.331	Rhinopithecus_roxellana
ENSCANG00000041771	TNRC6C	100	97.333	ENSSBOG00000023981	TNRC6C	100	97.333	Saimiri_boliviensis_boliviensis
ENSCANG00000041771	TNRC6C	54	90.270	ENSSHAG00000018330	-	100	89.622	Sarcophilus_harrisii
ENSCANG00000041771	TNRC6C	75	56.604	ENSSFOG00015004735	-	99	61.257	Scleropages_formosus
ENSCANG00000041771	TNRC6C	92	57.321	ENSSFOG00015006475	tnrc6c1	99	51.626	Scleropages_formosus
ENSCANG00000041771	TNRC6C	100	49.058	ENSSMAG00000012761	tnrc6c1	99	50.661	Scophthalmus_maximus
ENSCANG00000041771	TNRC6C	100	51.087	ENSSDUG00000002366	tnrc6c1	99	49.736	Seriola_dumerili
ENSCANG00000041771	TNRC6C	100	49.168	ENSSLDG00000025613	tnrc6c1	100	50.278	Seriola_lalandi_dorsalis
ENSCANG00000041771	TNRC6C	91	90.086	ENSSARG00000006816	TNRC6C	91	88.235	Sorex_araneus
ENSCANG00000041771	TNRC6C	83	86.597	ENSSPUG00000007341	TNRC6C	98	86.667	Sphenodon_punctatus
ENSCANG00000041771	TNRC6C	79	54.089	ENSSPAG00000014977	tnrc6c1	97	49.041	Stegastes_partitus
ENSCANG00000041771	TNRC6C	97	90.836	ENSSSCG00000034373	TNRC6C	100	88.149	Sus_scrofa
ENSCANG00000041771	TNRC6C	100	88.232	ENSTGUG00000007733	TNRC6C	100	85.794	Taeniopygia_guttata
ENSCANG00000041771	TNRC6C	79	54.986	ENSTRUG00000011685	tnrc6c1	100	49.945	Takifugu_rubripes
ENSCANG00000041771	TNRC6C	88	53.007	ENSTNIG00000005273	tnrc6c1	100	61.176	Tetraodon_nigroviridis
ENSCANG00000041771	TNRC6C	67	81.970	ENSTBEG00000005046	TNRC6C	100	82.322	Tupaia_belangeri
ENSCANG00000041771	TNRC6C	100	90.597	ENSTTRG00000010828	TNRC6C	97	90.656	Tursiops_truncatus
ENSCANG00000041771	TNRC6C	100	89.062	ENSUMAG00000013614	TNRC6C	99	89.520	Ursus_maritimus
ENSCANG00000041771	TNRC6C	52	81.093	ENSVPAG00000006765	-	99	81.100	Vicugna_pacos
ENSCANG00000041771	TNRC6C	100	91.543	ENSVVUG00000015268	TNRC6C	100	91.543	Vulpes_vulpes
ENSCANG00000041771	TNRC6C	100	75.264	ENSXETG00000019470	tnrc6c	100	74.618	Xenopus_tropicalis
ENSCANG00000041771	TNRC6C	100	49.971	ENSXMAG00000025971	tnrc6c1	100	49.089	Xiphophorus_maculatus