EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCANG00000041843 (Gene tree)
Gene ID
105509107
Gene Symbol
PUF60
Alias
FIR|RoBPI|SIAHBP1
Full Name
poly(U) binding splicing factor 60
Gene Type
protein_coding
Species
Colobus_angolensis_palliatus
Status
putative
Strand
Plus strand
Length
10324 bases
Position
chrKN980162.1:1327046-1337369
Accession
105509107
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCANP00000036299RRM_1PF00076.224.8e-3812
ENSCANP00000036299RRM_1PF00076.224.8e-3822
ENSCANP00000036304RRM_1PF00076.225.3e-3812
ENSCANP00000036304RRM_1PF00076.225.3e-3822
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCANT00000059553PUF60-2021305XM_011938215ENSCANP00000036304435 (aa)XP_011793605A0A2K5K5D5
ENSCANT00000059548PUF60-2011505-ENSCANP00000036299417 (aa)-A0A2K5K5D1
Gene Model
Click here to download ENSCANG00000041843's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000041843's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCANG00000041843PUF605031.481ENSCANG00000037677PABPC4L9331.977
ENSCANG00000041843PUF605031.034ENSCANG00000036233-9531.073
ENSCANG00000041843PUF605031.776ENSCANG00000034177PABPC45832.558
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCANG00000041843PUF60100100.000ENSG00000179950PUF6096100.000Homo_sapiens
ENSCANG00000041843PUF6010085.782ENSAPOG00000001713puf60b8085.782Acanthochromis_polyacanthus
ENSCANG00000041843PUF6010096.882ENSAMEG00000006406PUF608193.142Ailuropoda_melanoleuca
ENSCANG00000041843PUF6010075.355ENSACIG00000003263-8075.887Amphilophus_citrinellus
ENSCANG00000041843PUF6010084.834ENSACIG00000021705puf60b8184.834Amphilophus_citrinellus
ENSCANG00000041843PUF6010081.948ENSAOCG00000015558-7882.660Amphiprion_ocellaris
ENSCANG00000041843PUF6010085.782ENSAOCG00000005395puf60b8185.782Amphiprion_ocellaris
ENSCANG00000041843PUF608878.706ENSAPEG00000001836-7183.616Amphiprion_percula
ENSCANG00000041843PUF6010078.910ENSAPEG00000011923puf60b7981.311Amphiprion_percula
ENSCANG00000041843PUF6010081.429ENSATEG00000006303-7881.905Anabas_testudineus
ENSCANG00000041843PUF6010085.545ENSATEG00000001730puf60b7985.545Anabas_testudineus
ENSCANG00000041843PUF6010098.082ENSAPLG00000010150PUF608098.082Anas_platyrhynchos
ENSCANG00000041843PUF6010096.429ENSACAG00000001645PUF607896.429Anolis_carolinensis
ENSCANG00000041843PUF6010099.760ENSANAG00000018626PUF608199.760Aotus_nancymaae
ENSCANG00000041843PUF6010084.834ENSACLG00000004462puf60b8184.834Astatotilapia_calliptera
ENSCANG00000041843PUF608886.339ENSAMXG00000041030puf60b6886.575Astyanax_mexicanus
ENSCANG00000041843PUF6010083.565ENSAMXG00000036570puf60a7883.495Astyanax_mexicanus
ENSCANG00000041843PUF6010099.281ENSBTAG00000037493PUF608098.630Bos_taurus
ENSCANG00000041843PUF607250.000WBGene00004389rnp-68650.962Caenorhabditis_elegans
ENSCANG00000041843PUF6010099.760ENSCJAG00000021485PUF607999.760Callithrix_jacchus
ENSCANG00000041843PUF6010099.312ENSCAFG00000001400PUF608099.312Canis_familiaris
ENSCANG00000041843PUF6010099.520ENSCAFG00020018754PUF608099.312Canis_lupus_dingo
ENSCANG00000041843PUF6010099.281ENSCHIG00000001618PUF607595.354Capra_hircus
ENSCANG00000041843PUF6010099.520ENSTSYG00000011912PUF608199.520Carlito_syrichta
ENSCANG00000041843PUF6010099.520ENSCPOG00000014613PUF608099.085Cavia_porcellus
ENSCANG00000041843PUF6010099.520ENSCCAG00000007744PUF608098.633Cebus_capucinus
ENSCANG00000041843PUF60100100.000ENSCATG00000035405PUF6080100.000Cercocebus_atys
ENSCANG00000041843PUF6010099.520ENSCLAG00000009154PUF608098.409Chinchilla_lanigera
ENSCANG00000041843PUF60100100.000ENSCSAG00000008878PUF6081100.000Chlorocebus_sabaeus
ENSCANG00000041843PUF6010098.082ENSCPBG00000005595PUF607998.082Chrysemys_picta_bellii
ENSCANG00000041843PUF609846.462ENSCING00000008436-7846.698Ciona_intestinalis
ENSCANG00000041843PUF607959.882ENSCING00000002156-8763.043Ciona_intestinalis
ENSCANG00000041843PUF609745.926ENSCSAVG00000004765-7547.287Ciona_savignyi
ENSCANG00000041843PUF609753.302ENSCSAVG00000001385-8152.844Ciona_savignyi
ENSCANG00000041843PUF6010098.801ENSCGRG00001017442Puf608097.500Cricetulus_griseus_chok1gshd
ENSCANG00000041843PUF6010098.801ENSCGRG00000003717Puf608193.217Cricetulus_griseus_crigri
ENSCANG00000041843PUF6010071.226ENSCSEG00000014845-7177.150Cynoglossus_semilaevis
ENSCANG00000041843PUF6010084.834ENSCSEG00000019887puf60b7484.597Cynoglossus_semilaevis
ENSCANG00000041843PUF6010083.649ENSCVAG00000009386puf60b8185.071Cyprinodon_variegatus
ENSCANG00000041843PUF608978.457ENSCVAG00000001560-7778.133Cyprinodon_variegatus
ENSCANG00000041843PUF609878.404ENSDARG00000001241puf60b9996.032Danio_rerio
ENSCANG00000041843PUF6010086.279ENSDARG00000032175puf60a9994.043Danio_rerio
ENSCANG00000041843PUF609880.147ENSDNOG00000043278PUF607973.684Dasypus_novemcinctus
ENSCANG00000041843PUF6010099.310ENSDORG00000004585Puf608199.310Dipodomys_ordii
ENSCANG00000041843PUF607063.103FBgn0028577hfp6158.683Drosophila_melanogaster
ENSCANG00000041843PUF6010058.452ENSEBUG00000014291puf60b7064.076Eptatretus_burgeri
ENSCANG00000041843PUF609768.889ENSEBUG00000005470-6971.392Eptatretus_burgeri
ENSCANG00000041843PUF6010099.520ENSEASG00005009695PUF608099.312Equus_asinus_asinus
ENSCANG00000041843PUF6010099.520ENSECAG00000024681PUF608099.085Equus_caballus
ENSCANG00000041843PUF6010082.660ENSELUG00000006507puf60b8278.076Esox_lucius
ENSCANG00000041843PUF6010084.706ENSELUG00000018443-8084.559Esox_lucius
ENSCANG00000041843PUF6010099.041ENSFCAG00000001045PUF608199.041Felis_catus
ENSCANG00000041843PUF6010082.734ENSFALG00000001136PUF607984.173Ficedula_albicollis
ENSCANG00000041843PUF6010099.520ENSFDAG00000017177PUF608098.182Fukomys_damarensis
ENSCANG00000041843PUF6010084.123ENSFHEG00000020046puf60b8185.545Fundulus_heteroclitus
ENSCANG00000041843PUF609578.446ENSFHEG00000021687PUF607979.487Fundulus_heteroclitus
ENSCANG00000041843PUF6010067.681ENSGMOG00000006392puf60b8065.871Gadus_morhua
ENSCANG00000041843PUF608297.965ENSGALG00000039901PUF609497.965Gallus_gallus
ENSCANG00000041843PUF609979.856ENSGAFG00000004334-8179.000Gambusia_affinis
ENSCANG00000041843PUF6010083.175ENSGAFG00000021040puf60b8184.834Gambusia_affinis
ENSCANG00000041843PUF6010070.519ENSGACG00000004717puf60b7969.668Gasterosteus_aculeatus
ENSCANG00000041843PUF6010070.379ENSGACG00000001484-8069.121Gasterosteus_aculeatus
ENSCANG00000041843PUF6010098.082ENSGAGG00000013289PUF607497.783Gopherus_agassizii
ENSCANG00000041843PUF60100100.000ENSGGOG00000004646PUF6080100.000Gorilla_gorilla
ENSCANG00000041843PUF6010084.834ENSHBUG00000015118puf60b8184.834Haplochromis_burtoni
ENSCANG00000041843PUF6010081.991ENSHBUG00000009634-8081.728Haplochromis_burtoni
ENSCANG00000041843PUF6010099.520ENSHGLG00000006111PUF608098.182Heterocephalus_glaber_female
ENSCANG00000041843PUF6010099.520ENSHGLG00100012362PUF608098.182Heterocephalus_glaber_male
ENSCANG00000041843PUF608872.554ENSHCOG00000000378-7271.768Hippocampus_comes
ENSCANG00000041843PUF6010081.222ENSHCOG00000015541puf60b8180.726Hippocampus_comes
ENSCANG00000041843PUF608888.219ENSIPUG00000004660puf60b6988.219Ictalurus_punctatus
ENSCANG00000041843PUF6010080.465ENSIPUG00000002453puf60a8180.930Ictalurus_punctatus
ENSCANG00000041843PUF6010099.520ENSSTOG00000025037PUF608195.575Ictidomys_tridecemlineatus
ENSCANG00000041843PUF6010099.041ENSJJAG00000001076Puf608098.402Jaculus_jaculus
ENSCANG00000041843PUF6010084.123ENSKMAG00000016745puf60b8185.545Kryptolebias_marmoratus
ENSCANG00000041843PUF6010076.744ENSKMAG00000010106-8173.684Kryptolebias_marmoratus
ENSCANG00000041843PUF6010082.227ENSLBEG00000012505puf60b8180.963Labrus_bergylta
ENSCANG00000041843PUF608294.509ENSLACG00000005456PUF609593.064Latimeria_chalumnae
ENSCANG00000041843PUF6010091.429ENSLOCG00000010106puf60b7990.238Lepisosteus_oculatus
ENSCANG00000041843PUF6010097.842ENSLAFG00000022929PUF608192.920Loxodonta_africana
ENSCANG00000041843PUF60100100.000ENSMFAG00000043373PUF6080100.000Macaca_fascicularis
ENSCANG00000041843PUF60100100.000ENSMMUG00000013558PUF608999.543Macaca_mulatta
ENSCANG00000041843PUF60100100.000ENSMNEG00000031099PUF6080100.000Macaca_nemestrina
ENSCANG00000041843PUF60100100.000ENSMLEG00000040009PUF6081100.000Mandrillus_leucophaeus
ENSCANG00000041843PUF6010083.412ENSMAMG00000019476-7982.701Mastacembelus_armatus
ENSCANG00000041843PUF6010085.308ENSMAMG00000010394puf60b8182.569Mastacembelus_armatus
ENSCANG00000041843PUF6010084.834ENSMZEG00005018515puf60b8184.834Maylandia_zebra
ENSCANG00000041843PUF6010081.991ENSMZEG00005019425-7981.991Maylandia_zebra
ENSCANG00000041843PUF6010098.082ENSMGAG00000013070PUF609598.547Meleagris_gallopavo
ENSCANG00000041843PUF609578.250ENSMAUG00000018549-7482.031Mesocricetus_auratus
ENSCANG00000041843PUF608698.889ENSMAUG00000014267-9897.389Mesocricetus_auratus
ENSCANG00000041843PUF6010099.520ENSMICG00000012226PUF607999.520Microcebus_murinus
ENSCANG00000041843PUF6010099.041ENSMOCG00000018780Puf608097.727Microtus_ochrogaster
ENSCANG00000041843PUF6010085.071ENSMMOG00000004217puf60b8185.071Mola_mola
ENSCANG00000041843PUF6010071.531ENSMMOG00000018059-7776.261Mola_mola
ENSCANG00000041843PUF609999.277ENSMODG00000009161PUF608097.471Monodelphis_domestica
ENSCANG00000041843PUF6010080.806ENSMALG00000000200-7979.059Monopterus_albus
ENSCANG00000041843PUF6010076.066ENSMALG00000006797puf60b7776.066Monopterus_albus
ENSCANG00000041843PUF6010099.041MGP_CAROLIEiJ_G0019910Puf608097.727Mus_caroli
ENSCANG00000041843PUF6010099.041ENSMUSG00000002524Puf608097.727Mus_musculus
ENSCANG00000041843PUF6010099.041MGP_PahariEiJ_G0019920Puf608097.727Mus_pahari
ENSCANG00000041843PUF6010099.041MGP_SPRETEiJ_G0020812Puf608097.727Mus_spretus
ENSCANG00000041843PUF6010099.281ENSMPUG00000008137PUF608095.133Mustela_putorius_furo
ENSCANG00000041843PUF609999.274ENSMLUG00000000238-8095.312Myotis_lucifugus
ENSCANG00000041843PUF6010091.127ENSMLUG00000013032-7995.074Myotis_lucifugus
ENSCANG00000041843PUF6010099.041ENSNGAG00000000712Puf608199.041Nannospalax_galili
ENSCANG00000041843PUF6010084.834ENSNBRG00000013047puf60b9784.834Neolamprologus_brichardi
ENSCANG00000041843PUF6010082.227ENSNBRG00000017223-7982.185Neolamprologus_brichardi
ENSCANG00000041843PUF60100100.000ENSNLEG00000002156PUF6080100.000Nomascus_leucogenys
ENSCANG00000041843PUF607099.659ENSOPRG00000002147PUF605799.659Ochotona_princeps
ENSCANG00000041843PUF609770.588ENSODEG00000015513-7668.825Octodon_degus
ENSCANG00000041843PUF608298.824ENSODEG00000014024-9197.521Octodon_degus
ENSCANG00000041843PUF6010082.227ENSONIG00000014030-7881.754Oreochromis_niloticus
ENSCANG00000041843PUF6010084.834ENSONIG00000006247puf60b7984.834Oreochromis_niloticus
ENSCANG00000041843PUF6010073.810ENSOANG00000006962PUF607974.286Ornithorhynchus_anatinus
ENSCANG00000041843PUF6010077.674ENSORLG00000028655-8177.804Oryzias_latipes
ENSCANG00000041843PUF6010084.597ENSORLG00000012279puf60b8184.123Oryzias_latipes
ENSCANG00000041843PUF6010084.597ENSORLG00020007333puf608184.123Oryzias_latipes_hni
ENSCANG00000041843PUF6010078.404ENSORLG00020018144-7978.538Oryzias_latipes_hni
ENSCANG00000041843PUF6010078.404ENSORLG00015016833-7978.538Oryzias_latipes_hsok
ENSCANG00000041843PUF6010083.491ENSORLG00015007718puf60b8183.962Oryzias_latipes_hsok
ENSCANG00000041843PUF6010081.755ENSOMEG00000001643puf60b8082.741Oryzias_melastigma
ENSCANG00000041843PUF6010080.142ENSOMEG00000022185-7980.142Oryzias_melastigma
ENSCANG00000041843PUF6010099.520ENSOGAG00000006259PUF608195.796Otolemur_garnettii
ENSCANG00000041843PUF6010096.163ENSOARG00000016235PUF607896.163Ovis_aries
ENSCANG00000041843PUF60100100.000ENSPPAG00000029933PUF6080100.000Pan_paniscus
ENSCANG00000041843PUF6010099.041ENSPPRG00000003257PUF608199.041Panthera_pardus
ENSCANG00000041843PUF6010098.621ENSPTIG00000009795PUF608095.704Panthera_tigris_altaica
ENSCANG00000041843PUF6010099.770ENSPTRG00000043963-8099.770Pan_troglodytes
ENSCANG00000041843PUF6010099.770ENSPTRG00000020670PUF608099.770Pan_troglodytes
ENSCANG00000041843PUF60100100.000ENSPANG00000021936PUF6080100.000Papio_anubis
ENSCANG00000041843PUF6010086.936ENSPKIG00000012204puf60b8186.936Paramormyrops_kingsleyae
ENSCANG00000041843PUF6010085.613ENSPKIG00000004295puf60a9992.059Paramormyrops_kingsleyae
ENSCANG00000041843PUF6010098.321ENSPSIG00000004679PUF607998.321Pelodiscus_sinensis
ENSCANG00000041843PUF6010083.765ENSPMGG00000013444puf60b8183.765Periophthalmus_magnuspinnatus
ENSCANG00000041843PUF6010099.041ENSPEMG00000008820Puf608097.727Peromyscus_maniculatus_bairdii
ENSCANG00000041843PUF605087.117ENSPMAG00000009884puf60b10087.117Petromyzon_marinus
ENSCANG00000041843PUF6010099.520ENSPCIG00000020270PUF607999.520Phascolarctos_cinereus
ENSCANG00000041843PUF6010081.190ENSPFOG00000011118-7881.146Poecilia_formosa
ENSCANG00000041843PUF6010084.123ENSPFOG00000019217puf60b8083.855Poecilia_formosa
ENSCANG00000041843PUF6010084.123ENSPLAG00000010754puf60b8185.545Poecilia_latipinna
ENSCANG00000041843PUF6010080.714ENSPLAG00000017025-7280.668Poecilia_latipinna
ENSCANG00000041843PUF6010080.476ENSPMEG00000009767-7281.146Poecilia_mexicana
ENSCANG00000041843PUF6010084.123ENSPMEG00000000838puf60b8185.545Poecilia_mexicana
ENSCANG00000041843PUF6010080.734ENSPREG00000005440puf60b8183.623Poecilia_reticulata
ENSCANG00000041843PUF6010098.321ENSPPYG00000018951-9598.321Pongo_abelii
ENSCANG00000041843PUF6010099.281ENSPCAG00000014837PUF6010099.281Procavia_capensis
ENSCANG00000041843PUF6010099.281ENSPCOG00000027981PUF607999.281Propithecus_coquereli
ENSCANG00000041843PUF60100100.000ENSPVAG00000016167PUF6062100.000Pteropus_vampyrus
ENSCANG00000041843PUF6010084.834ENSPNYG00000002556puf60b8184.834Pundamilia_nyererei
ENSCANG00000041843PUF6010081.991ENSPNYG00000004273-7981.991Pundamilia_nyererei
ENSCANG00000041843PUF609876.386ENSPNAG00000019415puf60b6285.470Pygocentrus_nattereri
ENSCANG00000041843PUF6010081.368ENSPNAG00000019909puf60a8083.293Pygocentrus_nattereri
ENSCANG00000041843PUF6010099.041ENSRNOG00000009960Puf608097.727Rattus_norvegicus
ENSCANG00000041843PUF60100100.000ENSRBIG00000035274PUF6080100.000Rhinopithecus_bieti
ENSCANG00000041843PUF60100100.000ENSRROG00000029360PUF6080100.000Rhinopithecus_roxellana
ENSCANG00000041843PUF6010098.082ENSSBOG00000027089PUF607997.094Saimiri_boliviensis_boliviensis
ENSCANG00000041843PUF6010099.520ENSSHAG00000006668PUF608693.805Sarcophilus_harrisii
ENSCANG00000041843PUF609485.496ENSSFOG00015019619puf60b8085.496Scleropages_formosus
ENSCANG00000041843PUF6010079.866ENSSFOG00015019371puf60a7985.930Scleropages_formosus
ENSCANG00000041843PUF606694.224ENSSMAG00000016381puf60b5394.224Scophthalmus_maximus
ENSCANG00000041843PUF6010082.742ENSSDUG00000007048-7982.979Seriola_dumerili
ENSCANG00000041843PUF6010083.372ENSSDUG00000009935puf60b8084.264Seriola_dumerili
ENSCANG00000041843PUF6010085.545ENSSLDG00000024011puf60b8182.798Seriola_lalandi_dorsalis
ENSCANG00000041843PUF6010079.206ENSSLDG00000007366-8079.673Seriola_lalandi_dorsalis
ENSCANG00000041843PUF608384.971ENSSPUG00000013518PUF609485.460Sphenodon_punctatus
ENSCANG00000041843PUF6010081.797ENSSPAG00000020285-8182.353Stegastes_partitus
ENSCANG00000041843PUF6010082.339ENSSPAG00000012144puf60b8183.028Stegastes_partitus
ENSCANG00000041843PUF6010099.281ENSSSCG00000038800PUF607998.768Sus_scrofa
ENSCANG00000041843PUF6050100.000ENSTGUG00000016423-100100.000Taeniopygia_guttata
ENSCANG00000041843PUF6010094.005ENSTGUG00000012797-8094.005Taeniopygia_guttata
ENSCANG00000041843PUF6010076.499ENSTRUG00000008843-7979.750Takifugu_rubripes
ENSCANG00000041843PUF6010084.123ENSTRUG00000005420puf60b8181.422Takifugu_rubripes
ENSCANG00000041843PUF6010078.897ENSTNIG00000003069-7978.897Tetraodon_nigroviridis
ENSCANG00000041843PUF6010084.123ENSTNIG00000013675puf60b8084.123Tetraodon_nigroviridis
ENSCANG00000041843PUF608881.034ENSTBEG00000001899-8382.414Tupaia_belangeri
ENSCANG00000041843PUF607795.608ENSTBEG00000002751-9995.593Tupaia_belangeri
ENSCANG00000041843PUF6010098.561ENSTTRG00000017088PUF608198.561Tursiops_truncatus
ENSCANG00000041843PUF6010099.520ENSUAMG00000024917PUF608099.310Ursus_americanus
ENSCANG00000041843PUF609598.485ENSUMAG00000000272PUF608798.485Ursus_maritimus
ENSCANG00000041843PUF6010099.520ENSVVUG00000022527PUF608199.520Vulpes_vulpes
ENSCANG00000041843PUF6010094.005ENSXETG00000012469puf608093.827Xenopus_tropicalis
ENSCANG00000041843PUF6010080.095ENSXCOG00000012355puf60b8084.938Xiphophorus_couchianus
ENSCANG00000041843PUF6010084.123ENSXMAG00000001862puf60b8185.545Xiphophorus_maculatus
ENSCANG00000041843PUF6010077.804ENSXMAG00000010507-7979.218Xiphophorus_maculatus

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