EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCANG00000042201 (Gene tree)
Gene ID: 105512198
Gene Symbol: SF1
Alias: ZCCHC25|ZFM1|ZNF162
Full Name: splicing factor 1
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Plus strand
Length: 14896 bases
Position: chrKN980607.1:5386975-5401870
Accession: 105512198
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000037081	KH_1	PF00013.29	1.9e-07	1	1
ENSCANP00000037060	KH_1	PF00013.29	3.8e-07	1	1
ENSCANP00000037068	KH_1	PF00013.29	3.8e-07	1	1
ENSCANP00000037081	zf-CCHC	PF00098.23	0.00017	1	1
ENSCANP00000037068	zf-CCHC	PF00098.23	0.00026	1	1
ENSCANP00000037060	zf-CCHC	PF00098.23	0.00026	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000060331	SF1-203	1254	-	ENSCANP00000037081	417 (aa)	-	A0A2K5K7L4
ENSCANT00000060318	SF1-202	3415	XM_011942559	ENSCANP00000037068	638 (aa)	XP_011797949	A0A2K5K7L1
ENSCANT00000060310	SF1-201	3847	XM_011942558	ENSCANP00000037060	639 (aa)	XP_011797948	A0A2K5K7I5
ENSCANT00000060335	SF1-204	333	-	ENSCANP00000037085	110 (aa)	-	A0A2K5K7K8

Gene Model

Click here to download ENSCANG00000042201's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000042201's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000042201	SF1	91	80.928	ENSAPOG00000012341	sf1	56	80.307	Acanthochromis_polyacanthus
ENSCANG00000042201	SF1	99	91.757	ENSAMEG00000017828	SF1	91	94.737	Ailuropoda_melanoleuca
ENSCANG00000042201	SF1	89	82.713	ENSACIG00000016514	sf1	62	78.043	Amphilophus_citrinellus
ENSCANG00000042201	SF1	91	80.412	ENSAOCG00000010934	sf1	61	75.878	Amphiprion_ocellaris
ENSCANG00000042201	SF1	91	80.412	ENSAPEG00000009498	sf1	61	75.878	Amphiprion_percula
ENSCANG00000042201	SF1	89	81.579	ENSATEG00000001894	sf1	60	77.327	Anabas_testudineus
ENSCANG00000042201	SF1	96	87.255	ENSANAG00000022607	-	99	87.562	Aotus_nancymaae
ENSCANG00000042201	SF1	100	99.844	ENSANAG00000026664	-	100	99.844	Aotus_nancymaae
ENSCANG00000042201	SF1	88	84.282	ENSACLG00000007633	sf1	61	79.562	Astatotilapia_calliptera
ENSCANG00000042201	SF1	88	85.829	ENSAMXG00000003630	sf1	50	79.218	Astyanax_mexicanus
ENSCANG00000042201	SF1	100	100.000	ENSBTAG00000001035	SF1	100	100.000	Bos_taurus
ENSCANG00000042201	SF1	100	100.000	ENSCJAG00000002780	SF1	100	100.000	Callithrix_jacchus
ENSCANG00000042201	SF1	100	100.000	ENSCAFG00000014239	SF1	100	100.000	Canis_familiaris
ENSCANG00000042201	SF1	100	100.000	ENSCAFG00020014381	SF1	100	100.000	Canis_lupus_dingo
ENSCANG00000042201	SF1	100	100.000	ENSCHIG00000025867	SF1	100	100.000	Capra_hircus
ENSCANG00000042201	SF1	82	98.925	ENSTSYG00000033618	SF1	98	98.925	Carlito_syrichta
ENSCANG00000042201	SF1	88	99.457	ENSCAPG00000010762	SF1	100	78.889	Cavia_aperea
ENSCANG00000042201	SF1	98	99.522	ENSCPOG00000012290	SF1	100	99.522	Cavia_porcellus
ENSCANG00000042201	SF1	99	85.851	ENSCCAG00000023781	-	94	85.159	Cebus_capucinus
ENSCANG00000042201	SF1	100	100.000	ENSCCAG00000037881	SF1	100	100.000	Cebus_capucinus
ENSCANG00000042201	SF1	100	100.000	ENSCATG00000011564	SF1	100	100.000	Cercocebus_atys
ENSCANG00000042201	SF1	91	100.000	ENSCSAG00000007258	SF1	97	99.622	Chlorocebus_sabaeus
ENSCANG00000042201	SF1	84	92.571	ENSCHOG00000006008	SF1	79	93.780	Choloepus_hoffmanni
ENSCANG00000042201	SF1	88	92.683	ENSCPBG00000023763	SF1	66	85.135	Chrysemys_picta_bellii
ENSCANG00000042201	SF1	74	67.093	ENSCING00000005564	-	74	60.372	Ciona_intestinalis
ENSCANG00000042201	SF1	86	59.137	ENSCSAVG00000009055	-	72	63.787	Ciona_savignyi
ENSCANG00000042201	SF1	100	99.531	ENSCGRG00001003677	Sf1	100	99.531	Cricetulus_griseus_chok1gshd
ENSCANG00000042201	SF1	88	99.185	ENSCGRG00000001708	Sf1	97	97.905	Cricetulus_griseus_crigri
ENSCANG00000042201	SF1	89	80.628	ENSCSEG00000014375	sf1	53	80.105	Cynoglossus_semilaevis
ENSCANG00000042201	SF1	89	84.324	ENSCVAG00000001670	sf1	63	78.973	Cyprinodon_variegatus
ENSCANG00000042201	SF1	92	82.474	ENSDARG00000008188	sf1	72	78.788	Danio_rerio
ENSCANG00000042201	SF1	91	99.208	ENSDNOG00000001282	SF1	97	99.055	Dasypus_novemcinctus
ENSCANG00000042201	SF1	100	100.000	ENSDORG00000016334	Sf1	100	100.000	Dipodomys_ordii
ENSCANG00000042201	SF1	92	92.479	ENSETEG00000012830	SF1	82	91.453	Echinops_telfairi
ENSCANG00000042201	SF1	91	99.472	ENSEASG00005018272	SF1	97	99.244	Equus_asinus_asinus
ENSCANG00000042201	SF1	91	99.736	ENSECAG00000024544	SF1	97	99.433	Equus_caballus
ENSCANG00000042201	SF1	78	99.077	ENSEEUG00000001058	SF1	100	99.237	Erinaceus_europaeus
ENSCANG00000042201	SF1	88	81.432	ENSELUG00000013225	sf1	54	78.230	Esox_lucius
ENSCANG00000042201	SF1	100	100.000	ENSFCAG00000012231	SF1	100	100.000	Felis_catus
ENSCANG00000042201	SF1	98	91.250	ENSFDAG00000009833	SF1	99	92.006	Fukomys_damarensis
ENSCANG00000042201	SF1	91	80.155	ENSFHEG00000022656	sf1	61	76.102	Fundulus_heteroclitus
ENSCANG00000042201	SF1	79	87.941	ENSGMOG00000007469	sf1	62	87.941	Gadus_morhua
ENSCANG00000042201	SF1	91	83.896	ENSGAFG00000019284	sf1	78	80.238	Gambusia_affinis
ENSCANG00000042201	SF1	92	80.000	ENSGACG00000000826	sf1	66	79.494	Gasterosteus_aculeatus
ENSCANG00000042201	SF1	88	92.683	ENSGAGG00000021691	SF1	72	85.135	Gopherus_agassizii
ENSCANG00000042201	SF1	89	82.895	ENSHBUG00000011598	sf1	61	77.262	Haplochromis_burtoni
ENSCANG00000042201	SF1	100	99.843	ENSHGLG00000009541	SF1	100	99.843	Heterocephalus_glaber_female
ENSCANG00000042201	SF1	88	100.000	ENSHGLG00100013879	-	99	88.226	Heterocephalus_glaber_male
ENSCANG00000042201	SF1	92	89.005	ENSHGLG00100008255	-	94	86.555	Heterocephalus_glaber_male
ENSCANG00000042201	SF1	73	93.399	ENSHGLG00100008076	-	87	87.037	Heterocephalus_glaber_male
ENSCANG00000042201	SF1	91	79.639	ENSHCOG00000011388	sf1	58	77.193	Hippocampus_comes
ENSCANG00000042201	SF1	98	100.000	ENSSTOG00000009790	-	100	100.000	Ictidomys_tridecemlineatus
ENSCANG00000042201	SF1	88	89.431	ENSSTOG00000024353	-	83	96.667	Ictidomys_tridecemlineatus
ENSCANG00000042201	SF1	100	99.844	ENSJJAG00000011788	Sf1	100	99.844	Jaculus_jaculus
ENSCANG00000042201	SF1	91	81.841	ENSKMAG00000005854	sf1	63	77.283	Kryptolebias_marmoratus
ENSCANG00000042201	SF1	89	82.199	ENSLBEG00000019836	sf1	59	81.152	Labrus_bergylta
ENSCANG00000042201	SF1	90	81.053	ENSLACG00000018493	SF1	74	78.554	Latimeria_chalumnae
ENSCANG00000042201	SF1	88	85.294	ENSLOCG00000002130	sf1	57	84.946	Lepisosteus_oculatus
ENSCANG00000042201	SF1	99	95.659	ENSLAFG00000007201	SF1	100	95.659	Loxodonta_africana
ENSCANG00000042201	SF1	100	100.000	ENSMFAG00000033122	SF1	100	100.000	Macaca_fascicularis
ENSCANG00000042201	SF1	100	100.000	ENSMMUG00000022606	SF1	100	100.000	Macaca_mulatta
ENSCANG00000042201	SF1	100	100.000	ENSMNEG00000037901	SF1	100	100.000	Macaca_nemestrina
ENSCANG00000042201	SF1	100	98.086	ENSMLEG00000040706	SF1	100	98.086	Mandrillus_leucophaeus
ENSCANG00000042201	SF1	91	80.928	ENSMAMG00000001780	sf1	58	77.966	Mastacembelus_armatus
ENSCANG00000042201	SF1	89	82.632	ENSMZEG00005009196	sf1	61	77.030	Maylandia_zebra
ENSCANG00000042201	SF1	100	99.216	ENSMAUG00000014064	Sf1	100	99.216	Mesocricetus_auratus
ENSCANG00000042201	SF1	100	99.844	ENSMICG00000001202	SF1	100	99.844	Microcebus_murinus
ENSCANG00000042201	SF1	100	99.216	ENSMOCG00000022038	Sf1	100	99.216	Microtus_ochrogaster
ENSCANG00000042201	SF1	88	81.720	ENSMMOG00000020474	sf1	60	76.399	Mola_mola
ENSCANG00000042201	SF1	89	98.391	ENSMODG00000029407	SF1	97	94.407	Monodelphis_domestica
ENSCANG00000042201	SF1	89	82.888	ENSMALG00000020521	sf1	63	79.328	Monopterus_albus
ENSCANG00000042201	SF1	100	99.374	MGP_CAROLIEiJ_G0022607	Sf1	100	99.625	Mus_caroli
ENSCANG00000042201	SF1	100	99.374	ENSMUSG00000024949	Sf1	100	99.625	Mus_musculus
ENSCANG00000042201	SF1	100	99.374	MGP_PahariEiJ_G0014101	Sf1	100	99.625	Mus_pahari
ENSCANG00000042201	SF1	100	99.374	MGP_SPRETEiJ_G0023518	Sf1	100	99.625	Mus_spretus
ENSCANG00000042201	SF1	100	98.748	ENSMPUG00000012684	SF1	100	98.748	Mustela_putorius_furo
ENSCANG00000042201	SF1	99	99.683	ENSMLUG00000015217	-	99	99.683	Myotis_lucifugus
ENSCANG00000042201	SF1	92	95.288	ENSMLUG00000029800	-	78	94.934	Myotis_lucifugus
ENSCANG00000042201	SF1	100	99.687	ENSNGAG00000005550	Sf1	100	99.687	Nannospalax_galili
ENSCANG00000042201	SF1	88	84.282	ENSNBRG00000017606	sf1	60	79.562	Neolamprologus_brichardi
ENSCANG00000042201	SF1	100	100.000	ENSNLEG00000005236	-	100	100.000	Nomascus_leucogenys
ENSCANG00000042201	SF1	88	98.630	ENSMEUG00000013424	SF1	97	98.246	Notamacropus_eugenii
ENSCANG00000042201	SF1	78	99.692	ENSOPRG00000005008	SF1	96	99.158	Ochotona_princeps
ENSCANG00000042201	SF1	100	89.676	ENSODEG00000006102	-	100	87.827	Octodon_degus
ENSCANG00000042201	SF1	89	82.895	ENSONIG00000015728	sf1	61	77.262	Oreochromis_niloticus
ENSCANG00000042201	SF1	72	88.119	ENSOANG00000002909	SF1	96	87.724	Ornithorhynchus_anatinus
ENSCANG00000042201	SF1	99	99.841	ENSOCUG00000026486	SF1	100	99.841	Oryctolagus_cuniculus
ENSCANG00000042201	SF1	89	81.102	ENSORLG00000011853	sf1	58	76.499	Oryzias_latipes
ENSCANG00000042201	SF1	91	79.744	ENSORLG00020011834	sf1	60	75.352	Oryzias_latipes_hni
ENSCANG00000042201	SF1	89	80.577	ENSORLG00015012855	sf1	59	76.259	Oryzias_latipes_hsok
ENSCANG00000042201	SF1	91	80.256	ENSOMEG00000005210	sf1	60	77.458	Oryzias_melastigma
ENSCANG00000042201	SF1	100	99.843	ENSOGAG00000016196	SF1	100	99.843	Otolemur_garnettii
ENSCANG00000042201	SF1	91	100.000	ENSOARG00000009166	SF1	97	95.126	Ovis_aries
ENSCANG00000042201	SF1	99	99.513	ENSPPAG00000002799	-	100	100.000	Pan_paniscus
ENSCANG00000042201	SF1	98	100.000	ENSPPRG00000013566	SF1	100	100.000	Panthera_pardus
ENSCANG00000042201	SF1	90	99.200	ENSPTIG00000016141	SF1	80	98.876	Panthera_tigris_altaica
ENSCANG00000042201	SF1	100	100.000	ENSPTRG00000003846	SF1	100	100.000	Pan_troglodytes
ENSCANG00000042201	SF1	100	99.761	ENSPANG00000020754	SF1	100	99.761	Papio_anubis
ENSCANG00000042201	SF1	74	80.831	ENSPKIG00000012116	sf1	88	74.499	Paramormyrops_kingsleyae
ENSCANG00000042201	SF1	63	90.566	ENSPSIG00000003610	SF1	97	75.490	Pelodiscus_sinensis
ENSCANG00000042201	SF1	100	99.373	ENSPEMG00000010463	Sf1	100	99.373	Peromyscus_maniculatus_bairdii
ENSCANG00000042201	SF1	81	72.107	ENSPMAG00000008272	sf1	53	66.488	Petromyzon_marinus
ENSCANG00000042201	SF1	100	98.905	ENSPCIG00000018173	SF1	100	98.905	Phascolarctos_cinereus
ENSCANG00000042201	SF1	91	85.752	ENSPFOG00000013683	sf1	68	81.146	Poecilia_formosa
ENSCANG00000042201	SF1	88	83.862	ENSPLAG00000018076	sf1	61	79.187	Poecilia_latipinna
ENSCANG00000042201	SF1	88	83.862	ENSPMEG00000005726	sf1	62	79.426	Poecilia_mexicana
ENSCANG00000042201	SF1	90	82.292	ENSPREG00000004155	sf1	59	78.708	Poecilia_reticulata
ENSCANG00000042201	SF1	100	99.843	ENSPPYG00000003098	-	100	99.843	Pongo_abelii
ENSCANG00000042201	SF1	88	99.187	ENSPCAG00000013631	SF1	78	97.909	Procavia_capensis
ENSCANG00000042201	SF1	100	99.844	ENSPCOG00000027546	SF1	100	99.844	Propithecus_coquereli
ENSCANG00000042201	SF1	88	99.187	ENSPVAG00000016938	SF1	79	97.909	Pteropus_vampyrus
ENSCANG00000042201	SF1	89	82.632	ENSPNYG00000004673	sf1	59	78.199	Pundamilia_nyererei
ENSCANG00000042201	SF1	89	85.185	ENSPNAG00000013072	sf1	55	83.200	Pygocentrus_nattereri
ENSCANG00000042201	SF1	100	99.374	ENSRNOG00000021085	Sf1	100	99.374	Rattus_norvegicus
ENSCANG00000042201	SF1	100	95.931	ENSRBIG00000042818	SF1	100	95.931	Rhinopithecus_bieti
ENSCANG00000042201	SF1	100	98.321	ENSRROG00000045655	SF1	100	98.321	Rhinopithecus_roxellana
ENSCANG00000042201	SF1	70	43.182	YLR116W	MSL5	61	43.182	Saccharomyces_cerevisiae
ENSCANG00000042201	SF1	99	81.010	ENSSBOG00000022267	-	99	81.731	Saimiri_boliviensis_boliviensis
ENSCANG00000042201	SF1	91	91.906	ENSSHAG00000006841	SF1	75	93.171	Sarcophilus_harrisii
ENSCANG00000042201	SF1	88	82.888	ENSSFOG00015021978	sf1	58	77.184	Scleropages_formosus
ENSCANG00000042201	SF1	89	79.896	ENSSMAG00000007549	sf1	63	76.526	Scophthalmus_maximus
ENSCANG00000042201	SF1	91	80.206	ENSSDUG00000003903	sf1	63	76.402	Seriola_dumerili
ENSCANG00000042201	SF1	91	80.206	ENSSLDG00000013075	sf1	61	76.402	Seriola_lalandi_dorsalis
ENSCANG00000042201	SF1	88	94.565	ENSSARG00000008180	SF1	100	95.745	Sorex_araneus
ENSCANG00000042201	SF1	85	92.416	ENSSPUG00000012907	SF1	86	81.226	Sphenodon_punctatus
ENSCANG00000042201	SF1	91	80.670	ENSSPAG00000019060	sf1	61	75.878	Stegastes_partitus
ENSCANG00000042201	SF1	100	99.844	ENSSSCG00000013021	SF1	100	99.844	Sus_scrofa
ENSCANG00000042201	SF1	92	72.265	ENSTNIG00000004820	sf1	80	69.789	Tetraodon_nigroviridis
ENSCANG00000042201	SF1	96	84.804	ENSTBEG00000013133	SF1	79	100.000	Tupaia_belangeri
ENSCANG00000042201	SF1	88	93.750	ENSTTRG00000008857	SF1	96	95.543	Tursiops_truncatus
ENSCANG00000042201	SF1	82	97.137	ENSUAMG00000011977	SF1	100	97.137	Ursus_americanus
ENSCANG00000042201	SF1	91	98.677	ENSUMAG00000007268	SF1	89	100.000	Ursus_maritimus
ENSCANG00000042201	SF1	65	100.000	ENSVPAG00000011912	SF1	66	100.000	Vicugna_pacos
ENSCANG00000042201	SF1	91	100.000	ENSVVUG00000028585	SF1	97	99.622	Vulpes_vulpes
ENSCANG00000042201	SF1	94	82.872	ENSXETG00000008434	sf1	66	84.021	Xenopus_tropicalis
ENSCANG00000042201	SF1	88	84.932	ENSXCOG00000003704	sf1	75	80.941	Xiphophorus_couchianus
ENSCANG00000042201	SF1	89	83.113	ENSXMAG00000007822	sf1	61	79.426	Xiphophorus_maculatus