EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCANG00000042529 (Gene tree)
Gene ID: 105502597
Gene Symbol: -
Alias: -
Full Name: serine and arginine rich splicing factor 6
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Minus strand
Length: 3142 bases
Position: chrKN985766.1:10279305-10282446
Accession: 105502597
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000037704	RRM_1	PF00076.22	5.9e-21	1	2
ENSCANP00000037704	RRM_1	PF00076.22	5.9e-21	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000060957	-	879	XM_011929201	ENSCANP00000037704	292 (aa)	XP_011784591	A0A2K5K9D7

Gene Model

Click here to download ENSCANG00000042529's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000042529's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCANG00000042529	-	100	84.548	ENSCANG00000037774	-	100	84.548
ENSCANG00000042529	-	50	32.500	ENSCANG00000029726	-	76	34.158

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000042529	-	100	84.884	ENSG00000124193	SRSF6	100	84.884	Homo_sapiens
ENSCANG00000042529	-	100	82.659	ENSAMEG00000003710	SRSF6	100	82.370	Ailuropoda_melanoleuca
ENSCANG00000042529	-	64	55.417	ENSACIG00000020091	-	95	50.394	Amphilophus_citrinellus
ENSCANG00000042529	-	84	49.662	ENSACIG00000023658	-	56	65.363	Amphilophus_citrinellus
ENSCANG00000042529	-	60	53.304	ENSAPEG00000020746	-	66	60.106	Amphiprion_percula
ENSCANG00000042529	-	93	67.183	ENSACAG00000002061	SRSF6	92	70.312	Anolis_carolinensis
ENSCANG00000042529	-	100	84.012	ENSANAG00000024080	SRSF6	100	84.012	Aotus_nancymaae
ENSCANG00000042529	-	100	82.609	ENSBTAG00000008527	SRSF6	100	82.609	Bos_taurus
ENSCANG00000042529	-	74	80.970	ENSCJAG00000048403	SRSF6	99	80.970	Callithrix_jacchus
ENSCANG00000042529	-	100	82.899	ENSCAFG00000009289	SRSF6	100	82.899	Canis_familiaris
ENSCANG00000042529	-	100	82.899	ENSCAFG00020013559	SRSF6	100	82.899	Canis_lupus_dingo
ENSCANG00000042529	-	100	83.188	ENSCHIG00000009148	-	100	83.188	Capra_hircus
ENSCANG00000042529	-	100	83.188	ENSCHIG00000015890	-	100	83.188	Capra_hircus
ENSCANG00000042529	-	100	97.619	ENSTSYG00000026476	SRSF6	100	97.619	Carlito_syrichta
ENSCANG00000042529	-	93	62.346	ENSCPOG00000011761	SRSF6	70	95.652	Cavia_porcellus
ENSCANG00000042529	-	93	58.154	ENSCCAG00000018540	-	62	69.444	Cebus_capucinus
ENSCANG00000042529	-	100	84.302	ENSCCAG00000026018	-	100	84.302	Cebus_capucinus
ENSCANG00000042529	-	100	84.840	ENSCATG00000030794	SRSF6	100	84.840	Cercocebus_atys
ENSCANG00000042529	-	93	79.321	ENSCLAG00000010247	SRSF6	94	82.099	Chinchilla_lanigera
ENSCANG00000042529	-	100	84.840	ENSCSAG00000014022	SRSF6	100	84.840	Chlorocebus_sabaeus
ENSCANG00000042529	-	100	82.899	ENSCHOG00000000561	SRSF6	100	82.899	Choloepus_hoffmanni
ENSCANG00000042529	-	98	83.136	ENSCGRG00001022339	Srsf6	99	83.136	Cricetulus_griseus_chok1gshd
ENSCANG00000042529	-	73	96.729	ENSCGRG00000006618	Srsf6	100	96.729	Cricetulus_griseus_crigri
ENSCANG00000042529	-	93	77.469	ENSDNOG00000008410	SRSF6	94	80.247	Dasypus_novemcinctus
ENSCANG00000042529	-	100	83.188	ENSDORG00000028378	Srsf6	100	83.188	Dipodomys_ordii
ENSCANG00000042529	-	91	78.370	ENSETEG00000006221	SRSF6	94	79.503	Echinops_telfairi
ENSCANG00000042529	-	100	82.319	ENSEASG00005023429	SRSF6	100	82.319	Equus_asinus_asinus
ENSCANG00000042529	-	100	82.319	ENSECAG00000023932	SRSF6	100	82.319	Equus_caballus
ENSCANG00000042529	-	66	93.846	ENSEEUG00000002324	SRSF6	90	94.416	Erinaceus_europaeus
ENSCANG00000042529	-	100	82.899	ENSFCAG00000032814	SRSF6	100	82.899	Felis_catus
ENSCANG00000042529	-	100	96.599	ENSFDAG00000012191	SRSF6	100	96.599	Fukomys_damarensis
ENSCANG00000042529	-	85	56.393	ENSFHEG00000023065	srsf6a	55	66.120	Fundulus_heteroclitus
ENSCANG00000042529	-	66	49.576	ENSGMOG00000006105	srsf6a	62	56.471	Gadus_morhua
ENSCANG00000042529	-	91	69.325	ENSGALG00000000990	SRSF6	94	67.879	Gallus_gallus
ENSCANG00000042529	-	85	46.291	ENSGACG00000006084	srsf6a	53	61.828	Gasterosteus_aculeatus
ENSCANG00000042529	-	100	84.884	ENSGGOG00000009808	SRSF6	100	84.884	Gorilla_gorilla
ENSCANG00000042529	-	51	93.919	ENSGGOG00000043139	-	99	87.912	Gorilla_gorilla
ENSCANG00000042529	-	57	56.250	ENSHBUG00000006386	-	58	63.889	Haplochromis_burtoni
ENSCANG00000042529	-	93	79.321	ENSHGLG00000007348	SRSF6	94	82.099	Heterocephalus_glaber_female
ENSCANG00000042529	-	88	64.901	ENSHGLG00000007701	-	58	58.824	Heterocephalus_glaber_female
ENSCANG00000042529	-	100	96.939	ENSHGLG00100005043	SRSF6	100	96.939	Heterocephalus_glaber_male
ENSCANG00000042529	-	100	83.673	ENSSTOG00000010866	SRSF6	100	83.673	Ictidomys_tridecemlineatus
ENSCANG00000042529	-	65	96.335	ENSJJAG00000020690	Srsf6	91	96.373	Jaculus_jaculus
ENSCANG00000042529	-	87	67.419	ENSLACG00000005466	SRSF6	54	67.568	Latimeria_chalumnae
ENSCANG00000042529	-	81	95.397	ENSLAFG00000006682	SRSF6	92	95.798	Loxodonta_africana
ENSCANG00000042529	-	100	84.840	ENSMFAG00000036925	SRSF6	100	84.840	Macaca_fascicularis
ENSCANG00000042529	-	100	84.840	ENSMMUG00000006742	SRSF6	100	84.840	Macaca_mulatta
ENSCANG00000042529	-	100	83.965	ENSMNEG00000038270	-	100	83.965	Macaca_nemestrina
ENSCANG00000042529	-	100	84.840	ENSMNEG00000027392	-	100	84.840	Macaca_nemestrina
ENSCANG00000042529	-	73	99.533	ENSMLEG00000031524	SRSF6	100	99.533	Mandrillus_leucophaeus
ENSCANG00000042529	-	56	54.626	ENSMZEG00005008032	-	57	63.889	Maylandia_zebra
ENSCANG00000042529	-	100	82.948	ENSMICG00000008537	SRSF6	100	82.948	Microcebus_murinus
ENSCANG00000042529	-	73	96.729	ENSMOCG00000018738	Srsf6	100	96.729	Microtus_ochrogaster
ENSCANG00000042529	-	93	79.503	MGP_CAROLIEiJ_G0024606	Srsf6	95	81.988	Mus_caroli
ENSCANG00000042529	-	98	82.544	ENSMUSG00000016921	Srsf6	99	82.544	Mus_musculus
ENSCANG00000042529	-	93	79.503	MGP_PahariEiJ_G0026050	Srsf6	95	81.988	Mus_pahari
ENSCANG00000042529	-	98	82.544	MGP_SPRETEiJ_G0025528	Srsf6	99	82.544	Mus_spretus
ENSCANG00000042529	-	80	79.861	ENSMPUG00000017692	SRSF6	99	79.861	Mustela_putorius_furo
ENSCANG00000042529	-	100	80.580	ENSMLUG00000016618	SRSF6	100	80.580	Myotis_lucifugus
ENSCANG00000042529	-	98	82.249	ENSNGAG00000017560	Srsf6	99	82.249	Nannospalax_galili
ENSCANG00000042529	-	100	84.884	ENSNLEG00000006524	SRSF6	100	84.884	Nomascus_leucogenys
ENSCANG00000042529	-	88	96.525	ENSOPRG00000002017	-	100	96.525	Ochotona_princeps
ENSCANG00000042529	-	81	79.322	ENSOCUG00000009785	-	98	79.322	Oryctolagus_cuniculus
ENSCANG00000042529	-	100	83.382	ENSOARG00000003117	SRSF6	100	83.090	Ovis_aries
ENSCANG00000042529	-	88	74.834	ENSPPAG00000043131	-	100	75.497	Pan_paniscus
ENSCANG00000042529	-	100	85.131	ENSPPAG00000034327	-	100	85.131	Pan_paniscus
ENSCANG00000042529	-	100	82.899	ENSPPRG00000008917	SRSF6	100	82.899	Panthera_pardus
ENSCANG00000042529	-	73	97.222	ENSPTIG00000019153	SRSF6	100	97.222	Panthera_tigris_altaica
ENSCANG00000042529	-	88	74.834	ENSPTRG00000046274	-	100	75.497	Pan_troglodytes
ENSCANG00000042529	-	100	84.593	ENSPTRG00000044686	-	100	84.593	Pan_troglodytes
ENSCANG00000042529	-	89	98.842	ENSPANG00000035224	SRSF6	100	84.840	Papio_anubis
ENSCANG00000042529	-	100	54.467	ENSPKIG00000018463	-	67	65.169	Paramormyrops_kingsleyae
ENSCANG00000042529	-	87	53.398	ENSPMGG00000014963	srsf6a	55	66.304	Periophthalmus_magnuspinnatus
ENSCANG00000042529	-	100	84.884	ENSPPYG00000011019	SRSF6	100	84.884	Pongo_abelii
ENSCANG00000042529	-	100	82.948	ENSPCOG00000026364	SRSF6	100	82.948	Propithecus_coquereli
ENSCANG00000042529	-	93	77.950	ENSPVAG00000015232	SRSF6	94	80.435	Pteropus_vampyrus
ENSCANG00000042529	-	98	82.544	ENSRNOG00000006380	Srsf6	99	82.544	Rattus_norvegicus
ENSCANG00000042529	-	100	85.799	ENSRBIG00000041414	SRSF6	100	85.799	Rhinopithecus_bieti
ENSCANG00000042529	-	100	84.840	ENSRROG00000029989	SRSF6	100	84.840	Rhinopithecus_roxellana
ENSCANG00000042529	-	92	62.662	ENSSBOG00000034078	-	54	61.765	Saimiri_boliviensis_boliviensis
ENSCANG00000042529	-	100	84.012	ENSSBOG00000033708	-	100	84.012	Saimiri_boliviensis_boliviensis
ENSCANG00000042529	-	88	96.139	ENSSARG00000001602	SRSF6	100	96.139	Sorex_araneus
ENSCANG00000042529	-	85	53.000	ENSSPAG00000002362	srsf6a	67	64.021	Stegastes_partitus
ENSCANG00000042529	-	100	82.319	ENSSSCG00000007362	SRSF6	100	82.319	Sus_scrofa
ENSCANG00000042529	-	91	67.492	ENSTGUG00000003455	SRSF6	94	70.642	Taeniopygia_guttata
ENSCANG00000042529	-	85	55.150	ENSTNIG00000001692	srsf6a	57	63.978	Tetraodon_nigroviridis
ENSCANG00000042529	-	89	97.308	ENSTBEG00000013448	SRSF6	83	97.308	Tupaia_belangeri
ENSCANG00000042529	-	88	96.525	ENSTTRG00000015410	SRSF6	100	96.525	Tursiops_truncatus
ENSCANG00000042529	-	100	82.899	ENSUAMG00000003559	SRSF6	100	82.899	Ursus_americanus
ENSCANG00000042529	-	73	97.222	ENSUMAG00000001154	SRSF6	100	97.222	Ursus_maritimus
ENSCANG00000042529	-	97	100.000	ENSVPAG00000003016	SRSF6	83	100.000	Vicugna_pacos