EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCANG00000042688 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: protein strawberry notch homolog 1-like
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Plus strand
Length: 4215 bases
Position: chrKN980040.1:7181718-7185932
Accession: 105508170
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000038017	ResIII	PF04851.15	9.7e-07	1	1
ENSCANP00000038014	ResIII	PF04851.15	1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000061268	-	4077	XM_011936983	ENSCANP00000038014	1358 (aa)	XP_011792373	A0A2K5KA83
ENSCANT00000061271	-	3699	-	ENSCANP00000038017	1232 (aa)	-	A0A2K5KA99

Gene Model

Click here to download ENSCANG00000042688's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000042688's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCANG00000042688	-	77	55.391	ENSCANG00000036745	SBNO2	78	67.120

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000042688	-	100	94.194	ENSG00000139697	SBNO1	100	94.194	Homo_sapiens
ENSCANG00000042688	-	82	76.956	ENSAPOG00000003196	sbno1	98	77.042	Acanthochromis_polyacanthus
ENSCANG00000042688	-	100	92.489	ENSAMEG00000015151	SBNO1	100	92.561	Ailuropoda_melanoleuca
ENSCANG00000042688	-	99	70.795	ENSACIG00000008088	sbno1	99	70.704	Amphilophus_citrinellus
ENSCANG00000042688	-	99	71.368	ENSAOCG00000014859	sbno1	99	71.719	Amphiprion_ocellaris
ENSCANG00000042688	-	99	71.368	ENSAPEG00000006069	sbno1	99	71.719	Amphiprion_percula
ENSCANG00000042688	-	99	72.339	ENSATEG00000006667	sbno1	99	72.479	Anabas_testudineus
ENSCANG00000042688	-	100	86.944	ENSAPLG00000015674	SBNO1	100	87.097	Anas_platyrhynchos
ENSCANG00000042688	-	100	82.599	ENSACAG00000015441	SBNO1	88	82.670	Anolis_carolinensis
ENSCANG00000042688	-	100	93.333	ENSANAG00000029958	-	100	93.333	Aotus_nancymaae
ENSCANG00000042688	-	99	70.437	ENSACLG00000024913	sbno1	99	70.899	Astatotilapia_calliptera
ENSCANG00000042688	-	99	75.018	ENSAMXG00000019473	sbno1	99	75.445	Astyanax_mexicanus
ENSCANG00000042688	-	99	92.539	ENSBTAG00000020505	SBNO1	99	92.611	Bos_taurus
ENSCANG00000042688	-	100	93.620	ENSCJAG00000016599	SBNO1	100	93.620	Callithrix_jacchus
ENSCANG00000042688	-	100	92.555	ENSCAFG00000007503	SBNO1	100	92.627	Canis_familiaris
ENSCANG00000042688	-	100	91.828	ENSCAFG00020015363	SBNO1	100	91.900	Canis_lupus_dingo
ENSCANG00000042688	-	99	92.391	ENSCHIG00000008382	SBNO1	99	92.462	Capra_hircus
ENSCANG00000042688	-	100	92.903	ENSTSYG00000012749	SBNO1	100	92.975	Carlito_syrichta
ENSCANG00000042688	-	95	91.898	ENSCAPG00000000384	SBNO1	100	91.973	Cavia_aperea
ENSCANG00000042688	-	100	91.463	ENSCPOG00000008109	SBNO1	100	91.535	Cavia_porcellus
ENSCANG00000042688	-	100	88.968	ENSCCAG00000035316	SBNO1	100	89.040	Cebus_capucinus
ENSCANG00000042688	-	99	92.451	ENSCATG00000008239	SBNO1	99	94.180	Cercocebus_atys
ENSCANG00000042688	-	100	91.828	ENSCLAG00000008995	SBNO1	100	91.900	Chinchilla_lanigera
ENSCANG00000042688	-	83	94.473	ENSCSAG00000002064	SBNO1	100	94.473	Chlorocebus_sabaeus
ENSCANG00000042688	-	96	91.066	ENSCHOG00000008814	SBNO1	96	91.162	Choloepus_hoffmanni
ENSCANG00000042688	-	100	87.168	ENSCPBG00000025968	SBNO1	99	87.097	Chrysemys_picta_bellii
ENSCANG00000042688	-	100	91.900	ENSCGRG00001017470	Sbno1	100	91.971	Cricetulus_griseus_chok1gshd
ENSCANG00000042688	-	100	91.900	ENSCGRG00000004756	Sbno1	100	91.971	Cricetulus_griseus_crigri
ENSCANG00000042688	-	99	70.807	ENSCSEG00000011919	sbno1	99	71.459	Cynoglossus_semilaevis
ENSCANG00000042688	-	99	71.972	ENSCVAG00000007038	sbno1	99	72.320	Cyprinodon_variegatus
ENSCANG00000042688	-	99	74.893	ENSDARG00000099080	sbno1	99	75.535	Danio_rerio
ENSCANG00000042688	-	100	92.609	ENSDNOG00000017147	SBNO1	98	94.051	Dasypus_novemcinctus
ENSCANG00000042688	-	95	91.802	ENSDORG00000015261	Sbno1	99	91.802	Dipodomys_ordii
ENSCANG00000042688	-	89	95.467	ENSETEG00000005620	SBNO1	88	95.184	Echinops_telfairi
ENSCANG00000042688	-	76	62.104	ENSEBUG00000013823	sbno1	77	85.787	Eptatretus_burgeri
ENSCANG00000042688	-	54	93.304	ENSEASG00005012595	-	91	93.750	Equus_asinus_asinus
ENSCANG00000042688	-	100	93.047	ENSECAG00000006127	SBNO1	100	93.047	Equus_caballus
ENSCANG00000042688	-	83	96.703	ENSEEUG00000003793	SBNO1	82	96.703	Erinaceus_europaeus
ENSCANG00000042688	-	99	74.173	ENSELUG00000002886	sbno1	99	74.314	Esox_lucius
ENSCANG00000042688	-	99	92.826	ENSFCAG00000015331	SBNO1	99	92.898	Felis_catus
ENSCANG00000042688	-	100	86.944	ENSFALG00000009273	SBNO1	100	87.168	Ficedula_albicollis
ENSCANG00000042688	-	99	90.785	ENSFDAG00000014232	SBNO1	99	90.857	Fukomys_damarensis
ENSCANG00000042688	-	99	72.226	ENSFHEG00000007360	sbno1	99	72.222	Fundulus_heteroclitus
ENSCANG00000042688	-	94	74.088	ENSGMOG00000018229	sbno1	99	74.905	Gadus_morhua
ENSCANG00000042688	-	88	86.780	ENSGALG00000003392	SBNO1	99	86.861	Gallus_gallus
ENSCANG00000042688	-	99	72.163	ENSGAFG00000003960	sbno1	99	72.211	Gambusia_affinis
ENSCANG00000042688	-	94	74.638	ENSGACG00000015633	sbno1	99	74.943	Gasterosteus_aculeatus
ENSCANG00000042688	-	100	86.237	ENSGAGG00000001065	SBNO1	100	86.165	Gopherus_agassizii
ENSCANG00000042688	-	100	94.261	ENSGGOG00000015000	SBNO1	100	94.261	Gorilla_gorilla
ENSCANG00000042688	-	99	67.394	ENSHBUG00000011910	sbno1	99	67.803	Haplochromis_burtoni
ENSCANG00000042688	-	100	91.900	ENSHGLG00000014165	-	100	91.971	Heterocephalus_glaber_female
ENSCANG00000042688	-	91	77.996	ENSHCOG00000003246	sbno1	95	73.425	Hippocampus_comes
ENSCANG00000042688	-	99	74.592	ENSIPUG00000015830	Sbno1	98	74.450	Ictalurus_punctatus
ENSCANG00000042688	-	100	92.755	ENSSTOG00000023221	SBNO1	100	92.826	Ictidomys_tridecemlineatus
ENSCANG00000042688	-	100	92.043	ENSJJAG00000001741	Sbno1	100	92.043	Jaculus_jaculus
ENSCANG00000042688	-	99	71.963	ENSKMAG00000009696	sbno1	99	72.171	Kryptolebias_marmoratus
ENSCANG00000042688	-	99	71.858	ENSLBEG00000007623	sbno1	99	72.067	Labrus_bergylta
ENSCANG00000042688	-	96	79.345	ENSLACG00000017227	SBNO1	99	78.560	Latimeria_chalumnae
ENSCANG00000042688	-	99	77.699	ENSLOCG00000005725	sbno1	97	77.841	Lepisosteus_oculatus
ENSCANG00000042688	-	100	91.541	ENSLAFG00000002135	SBNO1	100	91.613	Loxodonta_africana
ENSCANG00000042688	-	100	94.337	ENSMFAG00000031429	SBNO1	100	94.337	Macaca_fascicularis
ENSCANG00000042688	-	100	94.337	ENSMMUG00000011496	SBNO1	100	94.337	Macaca_mulatta
ENSCANG00000042688	-	100	92.545	ENSMLEG00000033260	SBNO1	100	92.545	Mandrillus_leucophaeus
ENSCANG00000042688	-	99	71.952	ENSMAMG00000005473	sbno1	99	72.234	Mastacembelus_armatus
ENSCANG00000042688	-	100	87.016	ENSMGAG00000003274	SBNO1	100	87.240	Meleagris_gallopavo
ENSCANG00000042688	-	53	93.072	ENSMAUG00000004834	-	99	93.675	Mesocricetus_auratus
ENSCANG00000042688	-	100	91.613	ENSMICG00000006573	-	100	91.685	Microcebus_murinus
ENSCANG00000042688	-	100	88.691	ENSMOCG00000009390	Sbno1	99	90.597	Microtus_ochrogaster
ENSCANG00000042688	-	99	67.794	ENSMMOG00000008691	sbno1	99	68.006	Mola_mola
ENSCANG00000042688	-	99	89.885	ENSMODG00000012470	SBNO1	98	89.742	Monodelphis_domestica
ENSCANG00000042688	-	99	71.659	ENSMALG00000001056	sbno1	99	71.888	Monopterus_albus
ENSCANG00000042688	-	99	91.966	MGP_CAROLIEiJ_G0027749	Sbno1	99	94.127	Mus_caroli
ENSCANG00000042688	-	99	91.966	ENSMUSG00000038095	Sbno1	99	93.976	Mus_musculus
ENSCANG00000042688	-	99	92.037	MGP_PahariEiJ_G0024329	Sbno1	99	93.675	Mus_pahari
ENSCANG00000042688	-	99	91.750	MGP_SPRETEiJ_G0028747	Sbno1	99	93.976	Mus_spretus
ENSCANG00000042688	-	100	92.760	ENSMPUG00000001658	SBNO1	100	92.832	Mustela_putorius_furo
ENSCANG00000042688	-	100	92.186	ENSMLUG00000017159	SBNO1	100	92.258	Myotis_lucifugus
ENSCANG00000042688	-	100	93.047	ENSNGAG00000012620	Sbno1	100	93.047	Nannospalax_galili
ENSCANG00000042688	-	99	70.529	ENSNBRG00000019189	sbno1	99	70.991	Neolamprologus_brichardi
ENSCANG00000042688	-	100	91.715	ENSNLEG00000001502	SBNO1	100	91.787	Nomascus_leucogenys
ENSCANG00000042688	-	61	91.398	ENSMEUG00000008768	-	93	86.076	Notamacropus_eugenii
ENSCANG00000042688	-	100	89.327	ENSOPRG00000011054	SBNO1	100	89.327	Ochotona_princeps
ENSCANG00000042688	-	100	91.894	ENSODEG00000009997	SBNO1	100	91.966	Octodon_degus
ENSCANG00000042688	-	99	72.042	ENSONIG00000015348	sbno1	99	72.491	Oreochromis_niloticus
ENSCANG00000042688	-	98	90.889	ENSOCUG00000002441	SBNO1	95	90.962	Oryctolagus_cuniculus
ENSCANG00000042688	-	99	71.217	ENSORLG00000001593	sbno1	99	71.469	Oryzias_latipes
ENSCANG00000042688	-	99	71.338	ENSORLG00020015216	sbno1	99	71.449	Oryzias_latipes_hni
ENSCANG00000042688	-	99	71.338	ENSORLG00015002726	sbno1	99	71.519	Oryzias_latipes_hsok
ENSCANG00000042688	-	99	71.921	ENSOMEG00000019313	sbno1	99	72.011	Oryzias_melastigma
ENSCANG00000042688	-	53	91.114	ENSOGAG00000010781	-	99	91.114	Otolemur_garnettii
ENSCANG00000042688	-	99	92.186	ENSOARG00000004404	SBNO1	99	92.258	Ovis_aries
ENSCANG00000042688	-	100	94.050	ENSPPAG00000024635	SBNO1	100	94.050	Pan_paniscus
ENSCANG00000042688	-	99	92.826	ENSPPRG00000022092	SBNO1	99	92.898	Panthera_pardus
ENSCANG00000042688	-	100	92.258	ENSPTIG00000017803	SBNO1	100	92.616	Panthera_tigris_altaica
ENSCANG00000042688	-	100	94.122	ENSPTRG00000005597	SBNO1	100	94.122	Pan_troglodytes
ENSCANG00000042688	-	100	94.405	ENSPANG00000011640	SBNO1	100	94.405	Papio_anubis
ENSCANG00000042688	-	99	75.997	ENSPKIG00000001441	sbno1	99	76.353	Paramormyrops_kingsleyae
ENSCANG00000042688	-	92	82.453	ENSPSIG00000009256	-	100	82.531	Pelodiscus_sinensis
ENSCANG00000042688	-	100	86.214	ENSPSIG00000009572	-	100	86.286	Pelodiscus_sinensis
ENSCANG00000042688	-	100	91.541	ENSPEMG00000016087	Sbno1	100	91.613	Peromyscus_maniculatus_bairdii
ENSCANG00000042688	-	99	89.319	ENSPCIG00000010985	SBNO1	99	89.391	Phascolarctos_cinereus
ENSCANG00000042688	-	99	72.324	ENSPFOG00000005069	sbno1	99	72.370	Poecilia_formosa
ENSCANG00000042688	-	99	72.163	ENSPLAG00000015015	sbno1	99	72.440	Poecilia_latipinna
ENSCANG00000042688	-	99	72.343	ENSPMEG00000021212	sbno1	99	72.390	Poecilia_mexicana
ENSCANG00000042688	-	99	72.062	ENSPREG00000017746	sbno1	98	74.119	Poecilia_reticulata
ENSCANG00000042688	-	100	93.974	ENSPPYG00000005084	SBNO1	100	93.974	Pongo_abelii
ENSCANG00000042688	-	90	95.495	ENSPCAG00000008634	SBNO1	84	95.495	Procavia_capensis
ENSCANG00000042688	-	100	92.688	ENSPCOG00000024277	SBNO1	100	92.760	Propithecus_coquereli
ENSCANG00000042688	-	93	90.675	ENSPVAG00000015304	SBNO1	87	90.675	Pteropus_vampyrus
ENSCANG00000042688	-	99	72.355	ENSPNYG00000004291	sbno1	99	72.593	Pundamilia_nyererei
ENSCANG00000042688	-	99	75.340	ENSPNAG00000015622	sbno1	99	75.411	Pygocentrus_nattereri
ENSCANG00000042688	-	99	92.037	ENSRNOG00000001064	Sbno1	99	92.109	Rattus_norvegicus
ENSCANG00000042688	-	100	94.552	ENSRROG00000034230	SBNO1	100	94.552	Rhinopithecus_roxellana
ENSCANG00000042688	-	96	89.478	ENSSBOG00000015422	SBNO1	100	89.552	Saimiri_boliviensis_boliviensis
ENSCANG00000042688	-	99	75.303	ENSSFOG00015019025	sbno1	99	75.874	Scleropages_formosus
ENSCANG00000042688	-	99	71.932	ENSSMAG00000013640	sbno1	99	72.355	Scophthalmus_maximus
ENSCANG00000042688	-	99	71.899	ENSSDUG00000023480	sbno1	99	72.039	Seriola_dumerili
ENSCANG00000042688	-	99	71.829	ENSSLDG00000007928	sbno1	99	71.969	Seriola_lalandi_dorsalis
ENSCANG00000042688	-	89	92.013	ENSSARG00000002594	SBNO1	89	92.173	Sorex_araneus
ENSCANG00000042688	-	100	84.577	ENSSPUG00000012640	SBNO1	100	84.648	Sphenodon_punctatus
ENSCANG00000042688	-	99	71.329	ENSSPAG00000016244	sbno1	99	71.538	Stegastes_partitus
ENSCANG00000042688	-	100	92.760	ENSSSCG00000009776	SBNO1	100	92.832	Sus_scrofa
ENSCANG00000042688	-	100	86.872	ENSTGUG00000005380	SBNO1	100	87.097	Taeniopygia_guttata
ENSCANG00000042688	-	99	71.890	ENSTRUG00000018490	sbno1	99	72.199	Takifugu_rubripes
ENSCANG00000042688	-	57	68.881	ENSTNIG00000013506	sbno1	99	69.839	Tetraodon_nigroviridis
ENSCANG00000042688	-	100	93.047	ENSUAMG00000019671	SBNO1	100	93.047	Ursus_americanus
ENSCANG00000042688	-	100	93.047	ENSUMAG00000004002	SBNO1	100	93.047	Ursus_maritimus
ENSCANG00000042688	-	95	91.304	ENSVPAG00000007024	SBNO1	95	91.304	Vicugna_pacos
ENSCANG00000042688	-	100	92.688	ENSVVUG00000027807	SBNO1	100	92.760	Vulpes_vulpes
ENSCANG00000042688	-	99	77.295	ENSXETG00000031930	SBNO1	99	77.746	Xenopus_tropicalis
ENSCANG00000042688	-	87	70.968	ENSXCOG00000011607	sbno1	99	68.452	Xiphophorus_couchianus
ENSCANG00000042688	-	99	72.273	ENSXMAG00000002140	sbno1	99	72.390	Xiphophorus_maculatus