EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCANG00000043380 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Plus strand
Length: 5385 bases
Position: chrKN979619.1:9190580-9195964
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000039433	RRM_1	PF00076.22	5.1e-22	1	2
ENSCANP00000039433	RRM_1	PF00076.22	5.1e-22	2	2
ENSCANP00000039434	RRM_1	PF00076.22	6.9e-22	1	2
ENSCANP00000039434	RRM_1	PF00076.22	6.9e-22	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000062693	-	630	-	ENSCANP00000039434	209 (aa)	-	A0A2K5KEB3
ENSCANT00000062692	-	501	-	ENSCANP00000039433	166 (aa)	-	A0A2K5KEA6

Gene Model

Click here to download ENSCANG00000043380's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000043380's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCANG00000043380	-	100	83.178	ENSCANG00000021868	RBM4B	99	81.560
ENSCANG00000043380	-	100	78.972	ENSCANG00000028611	RBM14	97	81.159

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000043380	-	99	74.648	ENSACAG00000007777	-	60	74.648	Anolis_carolinensis
ENSCANG00000043380	-	79	68.613	ENSANAG00000033951	-	100	68.613	Aotus_nancymaae
ENSCANG00000043380	-	96	73.939	ENSTSYG00000036089	-	99	73.939	Carlito_syrichta
ENSCANG00000043380	-	82	69.504	ENSTSYG00000035012	-	96	68.531	Carlito_syrichta
ENSCANG00000043380	-	100	69.626	ENSCCAG00000029710	-	99	71.429	Cebus_capucinus
ENSCANG00000043380	-	80	63.768	ENSCCAG00000021719	-	96	63.768	Cebus_capucinus
ENSCANG00000043380	-	79	66.176	ENSCCAG00000024345	-	100	66.176	Cebus_capucinus
ENSCANG00000043380	-	100	78.947	ENSGGOG00000025398	-	99	72.535	Gorilla_gorilla
ENSCANG00000043380	-	83	76.923	ENSHGLG00000007708	-	95	78.261	Heterocephalus_glaber_female
ENSCANG00000043380	-	80	68.116	ENSHGLG00000003890	-	96	67.143	Heterocephalus_glaber_female
ENSCANG00000043380	-	94	67.662	ENSHGLG00000007536	-	62	67.662	Heterocephalus_glaber_female
ENSCANG00000043380	-	80	80.000	ENSHGLG00100012753	-	89	78.986	Heterocephalus_glaber_male
ENSCANG00000043380	-	94	67.662	ENSHGLG00100011767	-	96	64.740	Heterocephalus_glaber_male
ENSCANG00000043380	-	83	76.923	ENSHGLG00100011999	-	95	78.261	Heterocephalus_glaber_male
ENSCANG00000043380	-	80	71.223	ENSJJAG00000014755	-	89	71.429	Jaculus_jaculus
ENSCANG00000043380	-	95	74.847	ENSJJAG00000011978	-	100	74.847	Jaculus_jaculus
ENSCANG00000043380	-	100	94.737	ENSMFAG00000041731	-	92	94.737	Macaca_fascicularis
ENSCANG00000043380	-	100	94.737	ENSMMUG00000003366	-	69	94.737	Macaca_mulatta
ENSCANG00000043380	-	81	82.734	ENSMMUG00000010577	-	95	82.734	Macaca_mulatta
ENSCANG00000043380	-	100	94.737	ENSMNEG00000036946	-	92	94.737	Macaca_nemestrina
ENSCANG00000043380	-	100	94.258	ENSMLEG00000038589	-	92	94.258	Mandrillus_leucophaeus
ENSCANG00000043380	-	80	82.609	ENSNGAG00000012575	-	100	82.014	Nannospalax_galili
ENSCANG00000043380	-	100	70.813	ENSNLEG00000027654	-	56	70.813	Nomascus_leucogenys
ENSCANG00000043380	-	98	74.510	ENSPPAG00000040796	-	59	74.510	Pan_paniscus
ENSCANG00000043380	-	98	74.510	ENSPTRG00000046155	-	59	74.510	Pan_troglodytes
ENSCANG00000043380	-	100	93.301	ENSPANG00000018676	-	92	93.301	Papio_anubis
ENSCANG00000043380	-	99	81.221	ENSPCAG00000003414	-	59	81.221	Procavia_capensis
ENSCANG00000043380	-	97	91.304	ENSRBIG00000035855	-	99	91.304	Rhinopithecus_bieti
ENSCANG00000043380	-	97	90.683	ENSRROG00000038956	-	99	90.683	Rhinopithecus_roxellana
ENSCANG00000043380	-	81	66.429	ENSSBOG00000025871	-	97	66.429	Saimiri_boliviensis_boliviensis
ENSCANG00000043380	-	82	74.468	ENSSPUG00000005889	-	93	74.468	Sphenodon_punctatus
ENSCANG00000043380	-	100	82.710	ENSSSCG00000038304	-	60	82.710	Sus_scrofa
ENSCANG00000043380	-	80	82.609	ENSUMAG00000011745	-	62	82.609	Ursus_maritimus