EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCANG00000043435 (Gene tree)
Gene ID: 105502487
Gene Symbol: CHD6
Alias: CHD5|FLJ22369|KIAA1335|RIGB|dJ620E11.1
Full Name: chromodomain helicase DNA binding protein 6
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Plus strand
Length: 167759 bases
Position: chrKN985766.1:12214478-12382236
Accession: 105502487
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000039558	ResIII	PF04851.15	1.9e-08	1	1
ENSCANP00000039557	ResIII	PF04851.15	1.1e-07	1	1
ENSCANP00000039553	ResIII	PF04851.15	1.1e-07	1	1
ENSCANP00000039556	ResIII	PF04851.15	1.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000062790	CHD6-201	1119	-	ENSCANP00000039531	372 (aa)	-	A0A2K5KEM3
ENSCANT00000062816	CHD6-203	8142	-	ENSCANP00000039556	2713 (aa)	-	A0A2K5KEP3
ENSCANT00000062813	CHD6-202	10169	XM_011929036	ENSCANP00000039553	2714 (aa)	XP_011784426	A0A2K5KEM6
ENSCANT00000062817	CHD6-204	8106	-	ENSCANP00000039557	2701 (aa)	-	A0A2K5KEN3
ENSCANT00000062818	CHD6-205	1641	-	ENSCANP00000039558	546 (aa)	-	A0A2K5KEN4

Gene Model

Click here to download ENSCANG00000043435's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000043435's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCANG00000043435	CHD6	99	72.344	ENSCANG00000042948	CHD8	70	62.777
ENSCANG00000043435	CHD6	99	71.743	ENSCANG00000030349	CHD9	91	46.667
ENSCANG00000043435	CHD6	99	72.894	ENSCANG00000041382	CHD7	71	65.443
ENSCANG00000043435	CHD6	68	40.526	ENSCANG00000020239	CHD1L	82	36.047
ENSCANG00000043435	CHD6	93	42.125	ENSCANG00000035317	-	51	36.128
ENSCANG00000043435	CHD6	77	31.078	ENSCANG00000003556	SMARCAD1	84	35.385
ENSCANG00000043435	CHD6	75	40.048	ENSCANG00000007183	SMARCA1	50	41.385
ENSCANG00000043435	CHD6	68	34.899	ENSCANG00000037736	HELLS	83	37.789
ENSCANG00000043435	CHD6	85	40.164	ENSCANG00000038126	-	57	33.426

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000043435	CHD6	100	98.196	ENSG00000124177	CHD6	100	100.000	Homo_sapiens
ENSCANG00000043435	CHD6	99	82.418	ENSAPOG00000013736	chd6	64	75.764	Acanthochromis_polyacanthus
ENSCANG00000043435	CHD6	99	93.394	ENSAMEG00000009496	CHD6	100	91.510	Ailuropoda_melanoleuca
ENSCANG00000043435	CHD6	99	82.051	ENSATEG00000005608	chd6	62	77.395	Anabas_testudineus
ENSCANG00000043435	CHD6	99	89.541	ENSAPLG00000015592	CHD6	100	72.594	Anas_platyrhynchos
ENSCANG00000043435	CHD6	99	80.926	ENSACAG00000006842	CHD6	99	67.977	Anolis_carolinensis
ENSCANG00000043435	CHD6	100	100.000	ENSANAG00000037548	CHD6	100	100.000	Aotus_nancymaae
ENSCANG00000043435	CHD6	94	86.408	ENSAMXG00000009576	chd6	77	70.097	Astyanax_mexicanus
ENSCANG00000043435	CHD6	99	93.211	ENSBTAG00000005733	CHD6	100	88.326	Bos_taurus
ENSCANG00000043435	CHD6	100	99.817	ENSCJAG00000017920	CHD6	100	99.817	Callithrix_jacchus
ENSCANG00000043435	CHD6	99	93.394	ENSCAFG00000009236	CHD6	100	91.581	Canis_familiaris
ENSCANG00000043435	CHD6	100	97.985	ENSCAFG00020012906	CHD6	100	97.985	Canis_lupus_dingo
ENSCANG00000043435	CHD6	99	93.578	ENSCHIG00000017606	CHD6	100	88.436	Capra_hircus
ENSCANG00000043435	CHD6	84	93.023	ENSTSYG00000014635	CHD6	100	93.023	Carlito_syrichta
ENSCANG00000043435	CHD6	99	93.394	ENSCPOG00000015641	CHD6	100	91.290	Cavia_porcellus
ENSCANG00000043435	CHD6	100	100.000	ENSCCAG00000036828	CHD6	100	100.000	Cebus_capucinus
ENSCANG00000043435	CHD6	100	100.000	ENSCATG00000039248	CHD6	100	100.000	Cercocebus_atys
ENSCANG00000043435	CHD6	99	93.211	ENSCLAG00000013743	CHD6	100	91.309	Chinchilla_lanigera
ENSCANG00000043435	CHD6	100	99.153	ENSCSAG00000013997	CHD6	100	99.153	Chlorocebus_sabaeus
ENSCANG00000043435	CHD6	99	87.156	ENSCHOG00000012647	CHD6	95	89.789	Choloepus_hoffmanni
ENSCANG00000043435	CHD6	99	89.358	ENSCPBG00000019382	CHD6	99	73.998	Chrysemys_picta_bellii
ENSCANG00000043435	CHD6	99	91.376	ENSCGRG00001002694	Chd6	100	89.702	Cricetulus_griseus_chok1gshd
ENSCANG00000043435	CHD6	100	97.253	ENSCGRG00000006749	-	100	97.253	Cricetulus_griseus_crigri
ENSCANG00000043435	CHD6	91	88.956	ENSDARG00000017244	chd6	79	73.678	Danio_rerio
ENSCANG00000043435	CHD6	99	92.844	ENSDNOG00000004176	CHD6	99	90.748	Dasypus_novemcinctus
ENSCANG00000043435	CHD6	100	98.352	ENSEASG00005023433	CHD6	100	98.352	Equus_asinus_asinus
ENSCANG00000043435	CHD6	99	93.394	ENSECAG00000011761	CHD6	100	92.718	Equus_caballus
ENSCANG00000043435	CHD6	94	85.243	ENSELUG00000012309	chd6	92	80.139	Esox_lucius
ENSCANG00000043435	CHD6	99	93.394	ENSFCAG00000003572	CHD6	100	91.731	Felis_catus
ENSCANG00000043435	CHD6	99	88.991	ENSFALG00000012563	CHD6	95	77.555	Ficedula_albicollis
ENSCANG00000043435	CHD6	99	92.661	ENSFDAG00000013791	CHD6	99	91.661	Fukomys_damarensis
ENSCANG00000043435	CHD6	89	83.197	ENSGMOG00000011715	chd6	85	69.856	Gadus_morhua
ENSCANG00000043435	CHD6	94	80.233	ENSGACG00000000037	chd6	86	69.420	Gasterosteus_aculeatus
ENSCANG00000043435	CHD6	61	94.012	ENSGAGG00000007475	-	79	94.169	Gopherus_agassizii
ENSCANG00000043435	CHD6	100	100.000	ENSGGOG00000013123	CHD6	100	100.000	Gorilla_gorilla
ENSCANG00000043435	CHD6	99	81.319	ENSHBUG00000014701	chd6	65	73.227	Haplochromis_burtoni
ENSCANG00000043435	CHD6	99	92.844	ENSHGLG00000004548	CHD6	100	91.807	Heterocephalus_glaber_female
ENSCANG00000043435	CHD6	99	92.844	ENSHGLG00100006401	CHD6	100	91.807	Heterocephalus_glaber_male
ENSCANG00000043435	CHD6	94	85.631	ENSIPUG00000003692	chd6	74	76.502	Ictalurus_punctatus
ENSCANG00000043435	CHD6	99	93.394	ENSSTOG00000013382	CHD6	100	92.209	Ictidomys_tridecemlineatus
ENSCANG00000043435	CHD6	99	84.404	ENSLACG00000010881	CHD6	86	76.422	Latimeria_chalumnae
ENSCANG00000043435	CHD6	94	86.990	ENSLOCG00000007386	chd6	84	75.664	Lepisosteus_oculatus
ENSCANG00000043435	CHD6	99	93.028	ENSLAFG00000012144	CHD6	100	91.807	Loxodonta_africana
ENSCANG00000043435	CHD6	100	100.000	ENSMFAG00000032830	CHD6	100	100.000	Macaca_fascicularis
ENSCANG00000043435	CHD6	100	100.000	ENSMMUG00000020458	CHD6	100	100.000	Macaca_mulatta
ENSCANG00000043435	CHD6	100	100.000	ENSMNEG00000040847	CHD6	100	100.000	Macaca_nemestrina
ENSCANG00000043435	CHD6	100	100.000	ENSMLEG00000031965	CHD6	100	100.000	Mandrillus_leucophaeus
ENSCANG00000043435	CHD6	99	81.685	ENSMAMG00000013111	chd6	62	77.310	Mastacembelus_armatus
ENSCANG00000043435	CHD6	99	89.011	ENSMGAG00000001121	CHD6	100	72.003	Meleagris_gallopavo
ENSCANG00000043435	CHD6	100	99.084	ENSMICG00000016641	CHD6	100	99.084	Microcebus_murinus
ENSCANG00000043435	CHD6	99	91.560	ENSMOCG00000014004	-	98	93.708	Microtus_ochrogaster
ENSCANG00000043435	CHD6	99	91.743	ENSMODG00000000720	-	99	81.511	Monodelphis_domestica
ENSCANG00000043435	CHD6	99	91.009	MGP_CAROLIEiJ_G0024604	Chd6	100	94.768	Mus_caroli
ENSCANG00000043435	CHD6	99	91.009	ENSMUSG00000057133	Chd6	100	94.684	Mus_musculus
ENSCANG00000043435	CHD6	99	91.193	MGP_PahariEiJ_G0026048	Chd6	100	95.105	Mus_pahari
ENSCANG00000043435	CHD6	99	91.009	MGP_SPRETEiJ_G0025526	Chd6	100	94.768	Mus_spretus
ENSCANG00000043435	CHD6	99	93.394	ENSMPUG00000017695	CHD6	100	90.139	Mustela_putorius_furo
ENSCANG00000043435	CHD6	99	93.028	ENSMLUG00000016247	CHD6	100	91.143	Myotis_lucifugus
ENSCANG00000043435	CHD6	99	81.550	ENSNBRG00000013839	chd6	79	72.969	Neolamprologus_brichardi
ENSCANG00000043435	CHD6	99	96.809	ENSNLEG00000006496	CHD6	99	96.809	Nomascus_leucogenys
ENSCANG00000043435	CHD6	100	87.578	ENSOPRG00000013376	-	100	87.578	Ochotona_princeps
ENSCANG00000043435	CHD6	99	81.502	ENSONIG00000000393	chd6	87	73.585	Oreochromis_niloticus
ENSCANG00000043435	CHD6	99	89.541	ENSOANG00000014347	CHD6	99	70.424	Ornithorhynchus_anatinus
ENSCANG00000043435	CHD6	99	93.578	ENSOCUG00000012394	CHD6	100	89.812	Oryctolagus_cuniculus
ENSCANG00000043435	CHD6	96	84.571	ENSORLG00020021891	chd6	99	84.571	Oryzias_latipes_hni
ENSCANG00000043435	CHD6	99	93.211	ENSOGAG00000002427	CHD6	100	91.605	Otolemur_garnettii
ENSCANG00000043435	CHD6	99	93.578	ENSOARG00000002597	CHD6	100	86.150	Ovis_aries
ENSCANG00000043435	CHD6	99	93.394	ENSPPRG00000014756	CHD6	100	91.915	Panthera_pardus
ENSCANG00000043435	CHD6	99	93.394	ENSPTIG00000011094	CHD6	100	91.804	Panthera_tigris_altaica
ENSCANG00000043435	CHD6	100	100.000	ENSPTRG00000013504	CHD6	99	100.000	Pan_troglodytes
ENSCANG00000043435	CHD6	100	99.817	ENSPANG00000025554	CHD6	100	99.817	Papio_anubis
ENSCANG00000043435	CHD6	94	86.990	ENSPKIG00000005578	chd6	79	72.788	Paramormyrops_kingsleyae
ENSCANG00000043435	CHD6	99	82.202	ENSPMGG00000014877	chd6	88	77.188	Periophthalmus_magnuspinnatus
ENSCANG00000043435	CHD6	100	97.253	ENSPEMG00000014672	-	100	97.253	Peromyscus_maniculatus_bairdii
ENSCANG00000043435	CHD6	99	91.743	ENSPCIG00000028037	CHD6	100	81.041	Phascolarctos_cinereus
ENSCANG00000043435	CHD6	99	81.319	ENSPLAG00000003128	chd6	71	73.025	Poecilia_latipinna
ENSCANG00000043435	CHD6	99	81.319	ENSPREG00000022653	chd6	99	86.447	Poecilia_reticulata
ENSCANG00000043435	CHD6	100	98.344	ENSPPYG00000011016	CHD6	100	98.344	Pongo_abelii
ENSCANG00000043435	CHD6	100	99.634	ENSPCOG00000001089	CHD6	100	99.634	Propithecus_coquereli
ENSCANG00000043435	CHD6	99	81.319	ENSPNYG00000022516	chd6	78	74.317	Pundamilia_nyererei
ENSCANG00000043435	CHD6	94	86.990	ENSPNAG00000012825	chd6	79	70.705	Pygocentrus_nattereri
ENSCANG00000043435	CHD6	99	90.826	ENSRNOG00000016744	Chd6	100	87.716	Rattus_norvegicus
ENSCANG00000043435	CHD6	100	100.000	ENSSBOG00000022089	CHD6	99	100.000	Saimiri_boliviensis_boliviensis
ENSCANG00000043435	CHD6	99	91.560	ENSSHAG00000017072	CHD6	100	80.718	Sarcophilus_harrisii
ENSCANG00000043435	CHD6	94	86.990	ENSSFOG00015012920	chd6	81	73.456	Scleropages_formosus
ENSCANG00000043435	CHD6	84	99.782	ENSSARG00000002615	-	61	99.342	Sorex_araneus
ENSCANG00000043435	CHD6	99	93.394	ENSSSCG00000007360	CHD6	100	91.634	Sus_scrofa
ENSCANG00000043435	CHD6	99	89.358	ENSTGUG00000003179	CHD6	95	80.379	Taeniopygia_guttata
ENSCANG00000043435	CHD6	99	80.220	ENSTNIG00000017487	chd6	100	57.450	Tetraodon_nigroviridis
ENSCANG00000043435	CHD6	99	91.376	ENSTTRG00000013438	CHD6	100	87.959	Tursiops_truncatus
ENSCANG00000043435	CHD6	100	97.985	ENSUAMG00000024036	CHD6	100	97.985	Ursus_americanus
ENSCANG00000043435	CHD6	100	97.985	ENSUMAG00000002017	CHD6	100	97.985	Ursus_maritimus
ENSCANG00000043435	CHD6	98	88.037	ENSVPAG00000007941	CHD6	95	90.075	Vicugna_pacos
ENSCANG00000043435	CHD6	99	93.394	ENSVVUG00000029164	CHD6	100	91.621	Vulpes_vulpes
ENSCANG00000043435	CHD6	99	64.037	ENSXETG00000021445	chd6	64	69.726	Xenopus_tropicalis