EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000000223 (Gene tree)
Gene ID: -
Gene Symbol: TRUB2
Alias: CLONE24922
Full Name: TruB pseudouridine synthase family member 2
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 6410 bases
Position: chrAVPZ01000200.1:3856081-3862490
Accession: 17170
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000000266	TruB_N	PF01509.18	6.5e-29	1	1
ENSCAPP00000000268	TruB_N	PF01509.18	4.5e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000000271	TRUB2-201	888	-	ENSCAPP00000000266	296 (aa)	-	-
ENSCAPT00000000273	TRUB2-202	474	-	ENSCAPP00000000268	157 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000000223's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000000223's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000000223	TRUB2	97	81.250	ENSG00000167112	TRUB2	87	81.250	Homo_sapiens
ENSCAPG00000000223	TRUB2	69	57.561	ENSAPOG00000015733	trub2	74	57.561	Acanthochromis_polyacanthus
ENSCAPG00000000223	TRUB2	97	79.514	ENSAMEG00000015395	TRUB2	87	79.514	Ailuropoda_melanoleuca
ENSCAPG00000000223	TRUB2	81	55.510	ENSACIG00000016500	trub2	74	55.510	Amphilophus_citrinellus
ENSCAPG00000000223	TRUB2	90	52.113	ENSAOCG00000002330	trub2	73	56.855	Amphiprion_ocellaris
ENSCAPG00000000223	TRUB2	90	52.113	ENSAPEG00000013177	trub2	73	56.855	Amphiprion_percula
ENSCAPG00000000223	TRUB2	90	51.408	ENSATEG00000011371	trub2	79	54.800	Anabas_testudineus
ENSCAPG00000000223	TRUB2	76	67.111	ENSAPLG00000009254	TRUB2	75	67.111	Anas_platyrhynchos
ENSCAPG00000000223	TRUB2	88	67.050	ENSACAG00000007331	TRUB2	79	67.050	Anolis_carolinensis
ENSCAPG00000000223	TRUB2	93	82.482	ENSANAG00000036234	TRUB2	88	82.482	Aotus_nancymaae
ENSCAPG00000000223	TRUB2	89	51.773	ENSACLG00000010793	trub2	75	55.645	Astatotilapia_calliptera
ENSCAPG00000000223	TRUB2	96	50.877	ENSAMXG00000031679	trub2	81	50.877	Astyanax_mexicanus
ENSCAPG00000000223	TRUB2	58	80.117	ENSBTAG00000055269	-	77	80.117	Bos_taurus
ENSCAPG00000000223	TRUB2	81	80.315	ENSBTAG00000004663	TRUB2	77	80.315	Bos_taurus
ENSCAPG00000000223	TRUB2	97	79.861	ENSCJAG00000020009	TRUB2	87	79.861	Callithrix_jacchus
ENSCAPG00000000223	TRUB2	99	78.231	ENSCAFG00000020068	TRUB2	89	78.231	Canis_familiaris
ENSCAPG00000000223	TRUB2	90	80.851	ENSCAFG00020017325	-	79	81.560	Canis_lupus_dingo
ENSCAPG00000000223	TRUB2	97	80.070	ENSCHIG00000021160	TRUB2	86	80.070	Capra_hircus
ENSCAPG00000000223	TRUB2	97	80.556	ENSTSYG00000034163	TRUB2	87	80.556	Carlito_syrichta
ENSCAPG00000000223	TRUB2	100	100.000	ENSCPOG00000013535	TRUB2	89	99.662	Cavia_porcellus
ENSCAPG00000000223	TRUB2	95	79.787	ENSCCAG00000026531	-	86	79.787	Cebus_capucinus
ENSCAPG00000000223	TRUB2	97	78.819	ENSCCAG00000028463	-	89	78.322	Cebus_capucinus
ENSCAPG00000000223	TRUB2	97	81.250	ENSCATG00000038234	TRUB2	87	81.250	Cercocebus_atys
ENSCAPG00000000223	TRUB2	100	91.083	ENSCLAG00000001702	TRUB2	88	88.927	Chinchilla_lanigera
ENSCAPG00000000223	TRUB2	97	76.389	ENSCSAG00000014117	TRUB2	87	76.389	Chlorocebus_sabaeus
ENSCAPG00000000223	TRUB2	99	80.612	ENSCHOG00000001555	TRUB2	89	80.612	Choloepus_hoffmanni
ENSCAPG00000000223	TRUB2	88	64.615	ENSCPBG00000025186	TRUB2	77	64.751	Chrysemys_picta_bellii
ENSCAPG00000000223	TRUB2	83	36.090	ENSCSAVG00000003930	-	78	34.252	Ciona_savignyi
ENSCAPG00000000223	TRUB2	97	73.264	ENSCANG00000016135	TRUB2	86	73.264	Colobus_angolensis_palliatus
ENSCAPG00000000223	TRUB2	97	80.769	ENSCGRG00001024441	Trub2	86	80.769	Cricetulus_griseus_chok1gshd
ENSCAPG00000000223	TRUB2	97	80.769	ENSCGRG00000005633	Trub2	86	80.769	Cricetulus_griseus_crigri
ENSCAPG00000000223	TRUB2	82	50.781	ENSCSEG00000001331	trub2	70	53.617	Cynoglossus_semilaevis
ENSCAPG00000000223	TRUB2	85	52.632	ENSCVAG00000009901	trub2	72	56.017	Cyprinodon_variegatus
ENSCAPG00000000223	TRUB2	89	53.901	ENSDARG00000028379	trub2	70	54.435	Danio_rerio
ENSCAPG00000000223	TRUB2	97	79.167	ENSDNOG00000045679	-	87	79.167	Dasypus_novemcinctus
ENSCAPG00000000223	TRUB2	97	59.091	ENSDNOG00000043967	-	87	59.091	Dasypus_novemcinctus
ENSCAPG00000000223	TRUB2	98	79.110	ENSDORG00000016222	Trub2	86	82.418	Dipodomys_ordii
ENSCAPG00000000223	TRUB2	76	33.047	FBgn0033060	CG7849	74	33.047	Drosophila_melanogaster
ENSCAPG00000000223	TRUB2	99	76.109	ENSETEG00000009114	TRUB2	89	76.109	Echinops_telfairi
ENSCAPG00000000223	TRUB2	71	42.478	ENSEBUG00000015723	trub2	63	47.561	Eptatretus_burgeri
ENSCAPG00000000223	TRUB2	99	80.612	ENSEASG00005016819	TRUB2	89	80.612	Equus_asinus_asinus
ENSCAPG00000000223	TRUB2	99	80.952	ENSECAG00000023520	TRUB2	89	80.952	Equus_caballus
ENSCAPG00000000223	TRUB2	92	82.721	ENSEEUG00000008908	TRUB2	83	82.721	Erinaceus_europaeus
ENSCAPG00000000223	TRUB2	89	50.649	ENSELUG00000002376	trub2	82	54.023	Esox_lucius
ENSCAPG00000000223	TRUB2	95	79.298	ENSFCAG00000005839	TRUB2	88	79.298	Felis_catus
ENSCAPG00000000223	TRUB2	88	64.751	ENSFALG00000001364	TRUB2	84	65.517	Ficedula_albicollis
ENSCAPG00000000223	TRUB2	100	89.809	ENSFDAG00000021374	TRUB2	88	85.567	Fukomys_damarensis
ENSCAPG00000000223	TRUB2	81	50.413	ENSFHEG00000014655	trub2	71	50.413	Fundulus_heteroclitus
ENSCAPG00000000223	TRUB2	69	56.373	ENSGMOG00000000981	trub2	81	56.373	Gadus_morhua
ENSCAPG00000000223	TRUB2	88	62.452	ENSGALG00000004920	TRUB2	64	62.452	Gallus_gallus
ENSCAPG00000000223	TRUB2	89	50.000	ENSGAFG00000010107	trub2	76	53.755	Gambusia_affinis
ENSCAPG00000000223	TRUB2	94	51.246	ENSGACG00000001476	trub2	83	51.246	Gasterosteus_aculeatus
ENSCAPG00000000223	TRUB2	90	65.248	ENSGAGG00000022872	TRUB2	81	65.900	Gopherus_agassizii
ENSCAPG00000000223	TRUB2	97	81.944	ENSGGOG00000014780	TRUB2	87	81.944	Gorilla_gorilla
ENSCAPG00000000223	TRUB2	89	51.773	ENSHBUG00000022384	trub2	75	56.452	Haplochromis_burtoni
ENSCAPG00000000223	TRUB2	99	83.673	ENSHGLG00000016715	TRUB2	89	83.673	Heterocephalus_glaber_female
ENSCAPG00000000223	TRUB2	99	83.673	ENSHGLG00100016548	TRUB2	89	83.673	Heterocephalus_glaber_male
ENSCAPG00000000223	TRUB2	91	50.000	ENSHCOG00000017748	trub2	74	56.017	Hippocampus_comes
ENSCAPG00000000223	TRUB2	99	80.272	ENSSTOG00000008024	-	89	80.272	Ictidomys_tridecemlineatus
ENSCAPG00000000223	TRUB2	99	79.932	ENSSTOG00000022617	-	90	79.932	Ictidomys_tridecemlineatus
ENSCAPG00000000223	TRUB2	97	73.077	ENSJJAG00000019181	Trub2	85	73.077	Jaculus_jaculus
ENSCAPG00000000223	TRUB2	89	50.000	ENSKMAG00000007861	trub2	74	53.441	Kryptolebias_marmoratus
ENSCAPG00000000223	TRUB2	92	48.905	ENSLBEG00000000907	trub2	80	48.905	Labrus_bergylta
ENSCAPG00000000223	TRUB2	89	62.143	ENSLACG00000001515	TRUB2	76	62.646	Latimeria_chalumnae
ENSCAPG00000000223	TRUB2	89	56.643	ENSLOCG00000000885	trub2	86	57.252	Lepisosteus_oculatus
ENSCAPG00000000223	TRUB2	90	84.397	ENSLAFG00000002174	TRUB2	87	84.030	Loxodonta_africana
ENSCAPG00000000223	TRUB2	97	80.769	ENSMFAG00000000881	TRUB2	86	80.769	Macaca_fascicularis
ENSCAPG00000000223	TRUB2	97	80.420	ENSMMUG00000014146	TRUB2	86	80.420	Macaca_mulatta
ENSCAPG00000000223	TRUB2	97	80.420	ENSMNEG00000011189	TRUB2	86	80.420	Macaca_nemestrina
ENSCAPG00000000223	TRUB2	97	81.185	ENSMLEG00000037270	TRUB2	87	81.185	Mandrillus_leucophaeus
ENSCAPG00000000223	TRUB2	86	53.676	ENSMAMG00000023643	trub2	80	57.025	Mastacembelus_armatus
ENSCAPG00000000223	TRUB2	89	51.773	ENSMZEG00005016018	trub2	75	56.048	Maylandia_zebra
ENSCAPG00000000223	TRUB2	67	65.829	ENSMGAG00000003894	TRUB2	99	65.829	Meleagris_gallopavo
ENSCAPG00000000223	TRUB2	100	86.624	ENSMAUG00000010403	Trub2	86	81.119	Mesocricetus_auratus
ENSCAPG00000000223	TRUB2	97	79.514	ENSMICG00000047032	TRUB2	87	79.514	Microcebus_murinus
ENSCAPG00000000223	TRUB2	90	86.620	ENSMOCG00000014291	Trub2	86	86.641	Microtus_ochrogaster
ENSCAPG00000000223	TRUB2	91	54.815	ENSMMOG00000021674	trub2	81	54.815	Mola_mola
ENSCAPG00000000223	TRUB2	88	71.815	ENSMODG00000005940	TRUB2	88	71.815	Monodelphis_domestica
ENSCAPG00000000223	TRUB2	86	53.237	ENSMALG00000021231	trub2	72	57.551	Monopterus_albus
ENSCAPG00000000223	TRUB2	99	79.932	MGP_CAROLIEiJ_G0023368	Trub2	89	79.932	Mus_caroli
ENSCAPG00000000223	TRUB2	99	80.272	ENSMUSG00000039826	Trub2	89	80.272	Mus_musculus
ENSCAPG00000000223	TRUB2	100	84.076	MGP_PahariEiJ_G0024826	Trub2	89	79.592	Mus_pahari
ENSCAPG00000000223	TRUB2	100	84.713	MGP_SPRETEiJ_G0024286	Trub2	89	80.612	Mus_spretus
ENSCAPG00000000223	TRUB2	99	75.850	ENSMPUG00000013206	TRUB2	81	75.850	Mustela_putorius_furo
ENSCAPG00000000223	TRUB2	93	84.307	ENSMLUG00000005256	TRUB2	83	84.307	Myotis_lucifugus
ENSCAPG00000000223	TRUB2	97	81.119	ENSNGAG00000018679	Trub2	86	81.119	Nannospalax_galili
ENSCAPG00000000223	TRUB2	89	52.817	ENSNBRG00000016294	trub2	75	56.225	Neolamprologus_brichardi
ENSCAPG00000000223	TRUB2	97	80.903	ENSNLEG00000017556	TRUB2	87	80.903	Nomascus_leucogenys
ENSCAPG00000000223	TRUB2	88	74.131	ENSMEUG00000000484	TRUB2	84	74.131	Notamacropus_eugenii
ENSCAPG00000000223	TRUB2	95	79.643	ENSOPRG00000001981	TRUB2	85	79.643	Ochotona_princeps
ENSCAPG00000000223	TRUB2	100	87.261	ENSODEG00000017292	TRUB2	88	86.111	Octodon_degus
ENSCAPG00000000223	TRUB2	89	51.773	ENSONIG00000004230	trub2	75	55.645	Oreochromis_niloticus
ENSCAPG00000000223	TRUB2	90	79.433	ENSOANG00000029023	-	83	79.032	Ornithorhynchus_anatinus
ENSCAPG00000000223	TRUB2	97	80.836	ENSOCUG00000026296	TRUB2	79	80.836	Oryctolagus_cuniculus
ENSCAPG00000000223	TRUB2	89	51.321	ENSORLG00000020011	trub2	79	51.321	Oryzias_latipes
ENSCAPG00000000223	TRUB2	89	51.515	ENSORLG00020011028	trub2	77	51.515	Oryzias_latipes_hni
ENSCAPG00000000223	TRUB2	89	51.515	ENSORLG00015007494	trub2	80	51.515	Oryzias_latipes_hsok
ENSCAPG00000000223	TRUB2	90	52.113	ENSOMEG00000006702	trub2	75	56.048	Oryzias_melastigma
ENSCAPG00000000223	TRUB2	76	82.353	ENSOGAG00000003511	-	73	82.353	Otolemur_garnettii
ENSCAPG00000000223	TRUB2	82	78.279	ENSOARG00000003785	-	97	78.279	Ovis_aries
ENSCAPG00000000223	TRUB2	97	80.420	ENSOARG00000010579	-	86	80.420	Ovis_aries
ENSCAPG00000000223	TRUB2	97	81.944	ENSPPAG00000043146	TRUB2	87	81.944	Pan_paniscus
ENSCAPG00000000223	TRUB2	95	79.298	ENSPPRG00000006307	TRUB2	88	79.298	Panthera_pardus
ENSCAPG00000000223	TRUB2	95	78.947	ENSPTIG00000012366	TRUB2	88	78.947	Panthera_tigris_altaica
ENSCAPG00000000223	TRUB2	97	81.944	ENSPTRG00000021423	TRUB2	87	81.944	Pan_troglodytes
ENSCAPG00000000223	TRUB2	97	81.944	ENSPTRG00000052151	-	87	81.944	Pan_troglodytes
ENSCAPG00000000223	TRUB2	97	81.533	ENSPANG00000025856	TRUB2	87	81.533	Papio_anubis
ENSCAPG00000000223	TRUB2	89	50.355	ENSPKIG00000019769	trub2	81	52.227	Paramormyrops_kingsleyae
ENSCAPG00000000223	TRUB2	88	61.597	ENSPSIG00000015701	TRUB2	87	61.597	Pelodiscus_sinensis
ENSCAPG00000000223	TRUB2	90	47.917	ENSPMGG00000010206	trub2	78	52.000	Periophthalmus_magnuspinnatus
ENSCAPG00000000223	TRUB2	97	81.661	ENSPEMG00000017893	Trub2	87	81.661	Peromyscus_maniculatus_bairdii
ENSCAPG00000000223	TRUB2	88	75.290	ENSPCIG00000026731	TRUB2	84	75.290	Phascolarctos_cinereus
ENSCAPG00000000223	TRUB2	89	50.714	ENSPFOG00000018018	trub2	67	53.360	Poecilia_formosa
ENSCAPG00000000223	TRUB2	89	50.714	ENSPLAG00000010484	trub2	72	53.360	Poecilia_latipinna
ENSCAPG00000000223	TRUB2	91	52.045	ENSPMEG00000012913	trub2	79	52.045	Poecilia_mexicana
ENSCAPG00000000223	TRUB2	89	48.571	ENSPREG00000002549	trub2	81	49.643	Poecilia_reticulata
ENSCAPG00000000223	TRUB2	97	80.903	ENSPPYG00000019650	TRUB2	88	80.903	Pongo_abelii
ENSCAPG00000000223	TRUB2	99	81.293	ENSPCAG00000015068	TRUB2	89	81.293	Procavia_capensis
ENSCAPG00000000223	TRUB2	97	81.944	ENSPCOG00000017100	TRUB2	87	81.944	Propithecus_coquereli
ENSCAPG00000000223	TRUB2	96	82.042	ENSPVAG00000001224	TRUB2	95	82.042	Pteropus_vampyrus
ENSCAPG00000000223	TRUB2	89	51.773	ENSPNYG00000013666	trub2	75	56.048	Pundamilia_nyererei
ENSCAPG00000000223	TRUB2	94	50.538	ENSPNAG00000017292	trub2	79	50.538	Pygocentrus_nattereri
ENSCAPG00000000223	TRUB2	94	79.286	ENSRNOG00000043189	Trub2	87	79.286	Rattus_norvegicus
ENSCAPG00000000223	TRUB2	97	74.306	ENSRBIG00000006965	TRUB2	86	74.306	Rhinopithecus_bieti
ENSCAPG00000000223	TRUB2	97	82.986	ENSRROG00000042928	TRUB2	87	82.986	Rhinopithecus_roxellana
ENSCAPG00000000223	TRUB2	97	80.556	ENSSBOG00000022439	TRUB2	87	80.556	Saimiri_boliviensis_boliviensis
ENSCAPG00000000223	TRUB2	89	50.000	ENSSFOG00015013391	trub2	80	53.815	Scleropages_formosus
ENSCAPG00000000223	TRUB2	90	52.817	ENSSMAG00000020820	trub2	75	56.048	Scophthalmus_maximus
ENSCAPG00000000223	TRUB2	90	50.704	ENSSDUG00000016928	trub2	74	55.242	Seriola_dumerili
ENSCAPG00000000223	TRUB2	86	53.676	ENSSLDG00000024701	trub2	74	55.645	Seriola_lalandi_dorsalis
ENSCAPG00000000223	TRUB2	88	62.069	ENSSPUG00000015515	TRUB2	78	62.069	Sphenodon_punctatus
ENSCAPG00000000223	TRUB2	85	57.353	ENSSPAG00000017865	trub2	73	59.016	Stegastes_partitus
ENSCAPG00000000223	TRUB2	97	80.139	ENSSSCG00000005645	TRUB2	97	80.139	Sus_scrofa
ENSCAPG00000000223	TRUB2	88	65.134	ENSTGUG00000003704	TRUB2	99	65.134	Taeniopygia_guttata
ENSCAPG00000000223	TRUB2	95	45.098	ENSTRUG00000015499	trub2	76	52.823	Takifugu_rubripes
ENSCAPG00000000223	TRUB2	90	49.306	ENSTNIG00000014721	trub2	85	53.815	Tetraodon_nigroviridis
ENSCAPG00000000223	TRUB2	74	77.169	ENSTBEG00000000586	TRUB2	97	77.169	Tupaia_belangeri
ENSCAPG00000000223	TRUB2	90	83.688	ENSTTRG00000016486	TRUB2	87	76.389	Tursiops_truncatus
ENSCAPG00000000223	TRUB2	94	81.362	ENSUAMG00000020276	TRUB2	82	81.362	Ursus_americanus
ENSCAPG00000000223	TRUB2	94	81.362	ENSUMAG00000022051	TRUB2	82	81.362	Ursus_maritimus
ENSCAPG00000000223	TRUB2	89	70.714	ENSVPAG00000005793	TRUB2	88	61.649	Vicugna_pacos
ENSCAPG00000000223	TRUB2	93	79.927	ENSVVUG00000013451	TRUB2	78	79.927	Vulpes_vulpes
ENSCAPG00000000223	TRUB2	95	57.295	ENSXETG00000003973	trub2	86	57.295	Xenopus_tropicalis
ENSCAPG00000000223	TRUB2	89	50.000	ENSXCOG00000008759	trub2	74	54.032	Xiphophorus_couchianus
ENSCAPG00000000223	TRUB2	89	49.286	ENSXMAG00000015478	trub2	74	53.629	Xiphophorus_maculatus