EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAPG00000000237 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 29113 bases
Position: chrAVPZ01000400.1:14684518-14713630
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000000302	IBN_N	PF03810.19	5.5e-09	1	1
ENSCAPP00000000301	IBN_N	PF03810.19	5.6e-09	1	1
ENSCAPP00000000300	IBN_N	PF03810.19	5.9e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000000305	-	2538	-	ENSCAPP00000000300	845 (aa)	-	-
ENSCAPT00000000307	-	2370	-	ENSCAPP00000000302	789 (aa)	-	-
ENSCAPT00000000306	-	2508	-	ENSCAPP00000000301	835 (aa)	-	-
ENSCAPT00000000310	-	1695	-	ENSCAPP00000000305	564 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000000237's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000000237's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAPG00000000237	-	100	71.368	ENSCAPG00000004349	-	100	71.368

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000000237	-	100	80.109	ENSG00000124207	CSE1L	100	80.109	Homo_sapiens
ENSCAPG00000000237	-	100	70.752	ENSAPOG00000015943	cse1l	100	70.649	Acanthochromis_polyacanthus
ENSCAPG00000000237	-	100	78.785	ENSAMEG00000013717	CSE1L	100	78.785	Ailuropoda_melanoleuca
ENSCAPG00000000237	-	100	71.131	ENSACIG00000020004	cse1l	100	71.240	Amphilophus_citrinellus
ENSCAPG00000000237	-	100	71.366	ENSAOCG00000004356	cse1l	100	71.366	Amphiprion_ocellaris
ENSCAPG00000000237	-	100	71.475	ENSAPEG00000016588	cse1l	100	71.366	Amphiprion_percula
ENSCAPG00000000237	-	100	71.148	ENSATEG00000005414	cse1l	100	71.148	Anabas_testudineus
ENSCAPG00000000237	-	100	75.798	ENSAPLG00000010368	CSE1L	100	75.798	Anas_platyrhynchos
ENSCAPG00000000237	-	100	74.871	ENSACAG00000015951	CSE1L	100	74.871	Anolis_carolinensis
ENSCAPG00000000237	-	100	77.899	ENSANAG00000023526	CSE1L	99	80.570	Aotus_nancymaae
ENSCAPG00000000237	-	100	68.898	ENSACLG00000023214	cse1l	99	68.898	Astatotilapia_calliptera
ENSCAPG00000000237	-	100	70.164	ENSAMXG00000016416	cse1l	100	70.164	Astyanax_mexicanus
ENSCAPG00000000237	-	100	78.991	ENSBTAG00000005957	CSE1L	100	78.991	Bos_taurus
ENSCAPG00000000237	-	100	80.000	ENSCJAG00000016296	CSE1L	100	80.000	Callithrix_jacchus
ENSCAPG00000000237	-	100	79.094	ENSCAFG00000011260	CSE1L	99	79.094	Canis_familiaris
ENSCAPG00000000237	-	100	79.672	ENSCAFG00020016114	CSE1L	100	79.672	Canis_lupus_dingo
ENSCAPG00000000237	-	100	78.682	ENSCHIG00000016579	CSE1L	100	78.682	Capra_hircus
ENSCAPG00000000237	-	100	80.000	ENSTSYG00000013400	CSE1L	98	83.721	Carlito_syrichta
ENSCAPG00000000237	-	100	71.053	ENSCPOG00000023180	-	100	71.053	Cavia_porcellus
ENSCAPG00000000237	-	100	80.765	ENSCPOG00000005554	-	100	80.765	Cavia_porcellus
ENSCAPG00000000237	-	100	80.000	ENSCCAG00000014373	CSE1L	100	80.000	Cebus_capucinus
ENSCAPG00000000237	-	100	80.109	ENSCATG00000039153	CSE1L	99	83.598	Cercocebus_atys
ENSCAPG00000000237	-	100	78.734	ENSCLAG00000006169	CSE1L	100	78.734	Chinchilla_lanigera
ENSCAPG00000000237	-	100	79.197	ENSCSAG00000014977	CSE1L	100	79.197	Chlorocebus_sabaeus
ENSCAPG00000000237	-	100	76.416	ENSCHOG00000004640	CSE1L	100	76.416	Choloepus_hoffmanni
ENSCAPG00000000237	-	100	75.798	ENSCPBG00000026743	CSE1L	100	75.798	Chrysemys_picta_bellii
ENSCAPG00000000237	-	98	51.136	ENSCING00000002277	-	99	50.620	Ciona_intestinalis
ENSCAPG00000000237	-	98	50.570	ENSCSAVG00000003299	-	98	50.410	Ciona_savignyi
ENSCAPG00000000237	-	100	80.799	ENSCANG00000041300	CSE1L	99	84.991	Colobus_angolensis_palliatus
ENSCAPG00000000237	-	100	79.672	ENSCGRG00001005670	Cse1l	100	79.672	Cricetulus_griseus_chok1gshd
ENSCAPG00000000237	-	100	79.672	ENSCGRG00000012164	Cse1l	100	79.672	Cricetulus_griseus_crigri
ENSCAPG00000000237	-	100	69.783	ENSCSEG00000002471	cse1l	100	69.783	Cynoglossus_semilaevis
ENSCAPG00000000237	-	100	70.929	ENSCVAG00000004319	cse1l	100	70.929	Cyprinodon_variegatus
ENSCAPG00000000237	-	100	68.795	ENSDARG00000006963	cse1l	100	68.795	Danio_rerio
ENSCAPG00000000237	-	100	79.094	ENSDNOG00000014906	CSE1L	100	79.094	Dasypus_novemcinctus
ENSCAPG00000000237	-	89	85.670	ENSDORG00000013960	Cse1l	99	85.670	Dipodomys_ordii
ENSCAPG00000000237	-	87	47.896	FBgn0022213	Cse1	83	47.896	Drosophila_melanogaster
ENSCAPG00000000237	-	71	68.710	ENSEBUG00000011135	cse1l	89	69.345	Eptatretus_burgeri
ENSCAPG00000000237	-	100	79.672	ENSEASG00005023345	CSE1L	98	83.126	Equus_asinus_asinus
ENSCAPG00000000237	-	100	78.579	ENSECAG00000015543	CSE1L	97	78.579	Equus_caballus
ENSCAPG00000000237	-	100	70.820	ENSELUG00000001309	cse1l	100	70.820	Esox_lucius
ENSCAPG00000000237	-	100	80.109	ENSFCAG00000001446	CSE1L	100	80.109	Felis_catus
ENSCAPG00000000237	-	100	75.592	ENSFALG00000012932	CSE1L	97	75.592	Ficedula_albicollis
ENSCAPG00000000237	-	100	79.891	ENSFDAG00000005180	CSE1L	100	79.891	Fukomys_damarensis
ENSCAPG00000000237	-	100	62.460	ENSFHEG00000005939	cse1l	100	62.460	Fundulus_heteroclitus
ENSCAPG00000000237	-	100	68.177	ENSGMOG00000007944	cse1l	100	68.177	Gadus_morhua
ENSCAPG00000000237	-	100	75.592	ENSGALG00000004707	CSE1L	100	75.592	Gallus_gallus
ENSCAPG00000000237	-	100	70.820	ENSGAFG00000021631	cse1l	100	70.820	Gambusia_affinis
ENSCAPG00000000237	-	100	69.619	ENSGACG00000000963	cse1l	100	69.516	Gasterosteus_aculeatus
ENSCAPG00000000237	-	97	75.080	ENSGAGG00000012815	CSE1L	99	75.080	Gopherus_agassizii
ENSCAPG00000000237	-	100	80.109	ENSGGOG00000010875	CSE1L	100	80.109	Gorilla_gorilla
ENSCAPG00000000237	-	100	71.038	ENSHBUG00000013599	cse1l	100	71.038	Haplochromis_burtoni
ENSCAPG00000000237	-	100	73.563	ENSHGLG00000014944	-	100	73.772	Heterocephalus_glaber_female
ENSCAPG00000000237	-	100	80.109	ENSHGLG00000009067	CSE1L	100	80.109	Heterocephalus_glaber_female
ENSCAPG00000000237	-	100	73.459	ENSHGLG00100014942	-	100	73.668	Heterocephalus_glaber_male
ENSCAPG00000000237	-	100	80.109	ENSHGLG00100001243	CSE1L	100	80.109	Heterocephalus_glaber_male
ENSCAPG00000000237	-	100	70.492	ENSHCOG00000005034	cse1l	100	70.492	Hippocampus_comes
ENSCAPG00000000237	-	100	70.273	ENSIPUG00000023752	cse1l	100	70.383	Ictalurus_punctatus
ENSCAPG00000000237	-	100	79.891	ENSSTOG00000003600	CSE1L	100	79.891	Ictidomys_tridecemlineatus
ENSCAPG00000000237	-	100	79.672	ENSJJAG00000016509	Cse1l	100	79.672	Jaculus_jaculus
ENSCAPG00000000237	-	100	71.061	ENSKMAG00000021099	cse1l	100	70.958	Kryptolebias_marmoratus
ENSCAPG00000000237	-	100	69.945	ENSLBEG00000012480	cse1l	100	69.945	Labrus_bergylta
ENSCAPG00000000237	-	100	72.091	ENSLACG00000015970	CSE1L	100	72.091	Latimeria_chalumnae
ENSCAPG00000000237	-	100	70.958	ENSLOCG00000003099	cse1l	100	70.958	Lepisosteus_oculatus
ENSCAPG00000000237	-	100	77.881	ENSLAFG00000006607	CSE1L	100	78.601	Loxodonta_africana
ENSCAPG00000000237	-	100	80.109	ENSMFAG00000034230	CSE1L	99	83.598	Macaca_fascicularis
ENSCAPG00000000237	-	100	80.109	ENSMMUG00000019636	CSE1L	100	80.109	Macaca_mulatta
ENSCAPG00000000237	-	100	80.109	ENSMNEG00000031340	CSE1L	99	83.598	Macaca_nemestrina
ENSCAPG00000000237	-	91	87.500	ENSMLEG00000042388	CSE1L	100	87.500	Mandrillus_leucophaeus
ENSCAPG00000000237	-	100	69.516	ENSMAMG00000023931	cse1l	100	69.516	Mastacembelus_armatus
ENSCAPG00000000237	-	100	70.820	ENSMZEG00005010674	cse1l	100	70.820	Maylandia_zebra
ENSCAPG00000000237	-	100	79.781	ENSMAUG00000001362	Cse1l	100	79.781	Mesocricetus_auratus
ENSCAPG00000000237	-	100	79.253	ENSMICG00000001988	CSE1L	100	79.253	Microcebus_murinus
ENSCAPG00000000237	-	100	79.563	ENSMOCG00000013597	Cse1l	100	79.563	Microtus_ochrogaster
ENSCAPG00000000237	-	100	69.873	ENSMMOG00000021787	cse1l	100	69.873	Mola_mola
ENSCAPG00000000237	-	100	76.828	ENSMODG00000016269	CSE1L	100	76.828	Monodelphis_domestica
ENSCAPG00000000237	-	100	69.617	ENSMALG00000017385	cse1l	100	69.617	Monopterus_albus
ENSCAPG00000000237	-	100	79.454	MGP_CAROLIEiJ_G0024698	Cse1l	100	79.454	Mus_caroli
ENSCAPG00000000237	-	100	79.454	ENSMUSG00000002718	Cse1l	100	79.454	Mus_musculus
ENSCAPG00000000237	-	100	79.126	MGP_PahariEiJ_G0026140	Cse1l	100	79.126	Mus_pahari
ENSCAPG00000000237	-	100	79.454	MGP_SPRETEiJ_G0025618	Cse1l	100	79.454	Mus_spretus
ENSCAPG00000000237	-	100	78.682	ENSMPUG00000017586	CSE1L	99	78.682	Mustela_putorius_furo
ENSCAPG00000000237	-	100	76.828	ENSMLUG00000008368	CSE1L	100	76.828	Myotis_lucifugus
ENSCAPG00000000237	-	100	78.498	ENSNGAG00000001115	Cse1l	100	78.498	Nannospalax_galili
ENSCAPG00000000237	-	100	70.929	ENSNBRG00000005053	cse1l	100	70.929	Neolamprologus_brichardi
ENSCAPG00000000237	-	100	78.689	ENSNLEG00000006945	CSE1L	97	82.180	Nomascus_leucogenys
ENSCAPG00000000237	-	66	97.959	ENSMEUG00000005658	-	62	97.959	Notamacropus_eugenii
ENSCAPG00000000237	-	95	77.073	ENSOPRG00000014530	CSE1L	90	77.073	Ochotona_princeps
ENSCAPG00000000237	-	100	79.891	ENSODEG00000006918	-	100	79.891	Octodon_degus
ENSCAPG00000000237	-	100	70.546	ENSONIG00000018970	cse1l	100	70.546	Oreochromis_niloticus
ENSCAPG00000000237	-	100	75.695	ENSOANG00000006402	CSE1L	99	75.695	Ornithorhynchus_anatinus
ENSCAPG00000000237	-	100	78.498	ENSOCUG00000005459	CSE1L	100	78.498	Oryctolagus_cuniculus
ENSCAPG00000000237	-	100	69.928	ENSORLG00000000603	cse1l	97	74.679	Oryzias_latipes
ENSCAPG00000000237	-	100	68.197	ENSORLG00020007653	cse1l	100	68.087	Oryzias_latipes_hni
ENSCAPG00000000237	-	60	74.312	ENSORLG00015003694	cse1l	97	74.679	Oryzias_latipes_hsok
ENSCAPG00000000237	-	100	70.443	ENSOMEG00000014357	cse1l	100	70.443	Oryzias_melastigma
ENSCAPG00000000237	-	100	77.002	ENSOGAG00000002126	CSE1L	100	77.002	Otolemur_garnettii
ENSCAPG00000000237	-	100	78.704	ENSOARG00000012031	CSE1L	100	78.704	Ovis_aries
ENSCAPG00000000237	-	100	80.109	ENSPPAG00000038391	CSE1L	100	80.109	Pan_paniscus
ENSCAPG00000000237	-	100	80.109	ENSPPRG00000022681	CSE1L	100	80.109	Panthera_pardus
ENSCAPG00000000237	-	100	80.109	ENSPTIG00000011919	CSE1L	100	80.109	Panthera_tigris_altaica
ENSCAPG00000000237	-	100	80.109	ENSPTRG00000013599	CSE1L	100	80.109	Pan_troglodytes
ENSCAPG00000000237	-	100	79.730	ENSPANG00000026147	CSE1L	100	79.730	Papio_anubis
ENSCAPG00000000237	-	100	71.038	ENSPKIG00000024520	cse1l	100	71.038	Paramormyrops_kingsleyae
ENSCAPG00000000237	-	100	76.107	ENSPSIG00000010864	CSE1L	99	76.107	Pelodiscus_sinensis
ENSCAPG00000000237	-	100	79.891	ENSPEMG00000000944	Cse1l	100	79.891	Peromyscus_maniculatus_bairdii
ENSCAPG00000000237	-	100	77.705	ENSPCIG00000023472	CSE1L	100	77.705	Phascolarctos_cinereus
ENSCAPG00000000237	-	100	70.752	ENSPFOG00000001989	cse1l	100	70.752	Poecilia_formosa
ENSCAPG00000000237	-	100	71.257	ENSPLAG00000015012	cse1l	100	71.257	Poecilia_latipinna
ENSCAPG00000000237	-	100	70.752	ENSPMEG00000022671	cse1l	100	70.752	Poecilia_mexicana
ENSCAPG00000000237	-	100	70.546	ENSPREG00000009081	cse1l	100	70.546	Poecilia_reticulata
ENSCAPG00000000237	-	100	79.197	ENSPPYG00000011110	CSE1L	100	79.197	Pongo_abelii
ENSCAPG00000000237	-	75	82.752	ENSPCAG00000007508	CSE1L	80	82.752	Procavia_capensis
ENSCAPG00000000237	-	88	86.552	ENSPCOG00000026411	CSE1L	99	86.552	Propithecus_coquereli
ENSCAPG00000000237	-	98	77.453	ENSPVAG00000015014	CSE1L	100	77.453	Pteropus_vampyrus
ENSCAPG00000000237	-	100	71.148	ENSPNYG00000007058	cse1l	100	71.148	Pundamilia_nyererei
ENSCAPG00000000237	-	100	69.836	ENSPNAG00000012903	cse1l	100	69.836	Pygocentrus_nattereri
ENSCAPG00000000237	-	100	77.858	ENSRNOG00000007665	Cse1l	100	77.858	Rattus_norvegicus
ENSCAPG00000000237	-	100	80.109	ENSRBIG00000029361	CSE1L	99	83.598	Rhinopithecus_bieti
ENSCAPG00000000237	-	100	80.109	ENSRROG00000021686	CSE1L	99	83.598	Rhinopithecus_roxellana
ENSCAPG00000000237	-	87	34.852	YGL238W	CSE1	78	36.016	Saccharomyces_cerevisiae
ENSCAPG00000000237	-	100	80.000	ENSSBOG00000021396	CSE1L	100	80.000	Saimiri_boliviensis_boliviensis
ENSCAPG00000000237	-	100	70.492	ENSSFOG00015021428	cse1l	100	70.492	Scleropages_formosus
ENSCAPG00000000237	-	100	69.928	ENSSMAG00000000580	cse1l	96	69.928	Scophthalmus_maximus
ENSCAPG00000000237	-	100	70.649	ENSSDUG00000012110	cse1l	100	70.649	Seriola_dumerili
ENSCAPG00000000237	-	100	70.649	ENSSLDG00000022083	cse1l	100	70.649	Seriola_lalandi_dorsalis
ENSCAPG00000000237	-	100	76.721	ENSSPUG00000017941	CSE1L	100	76.721	Sphenodon_punctatus
ENSCAPG00000000237	-	100	71.148	ENSSPAG00000008182	cse1l	100	71.148	Stegastes_partitus
ENSCAPG00000000237	-	100	79.225	ENSSSCG00000025534	CSE1L	97	82.873	Sus_scrofa
ENSCAPG00000000237	-	100	75.283	ENSTGUG00000008823	CSE1L	100	75.283	Taeniopygia_guttata
ENSCAPG00000000237	-	95	68.245	ENSTRUG00000005496	cse1l	95	68.587	Takifugu_rubripes
ENSCAPG00000000237	-	100	69.516	ENSTNIG00000014631	cse1l	100	69.516	Tetraodon_nigroviridis
ENSCAPG00000000237	-	91	100.000	ENSTBEG00000008338	CSE1L	86	100.000	Tupaia_belangeri
ENSCAPG00000000237	-	90	89.474	ENSTTRG00000004279	CSE1L	91	89.474	Tursiops_truncatus
ENSCAPG00000000237	-	100	78.682	ENSUAMG00000025448	CSE1L	99	78.682	Ursus_americanus
ENSCAPG00000000237	-	100	78.682	ENSUMAG00000024476	CSE1L	99	78.682	Ursus_maritimus
ENSCAPG00000000237	-	100	76.514	ENSVPAG00000001312	CSE1L	100	76.514	Vicugna_pacos
ENSCAPG00000000237	-	100	79.094	ENSVVUG00000022322	CSE1L	99	79.094	Vulpes_vulpes
ENSCAPG00000000237	-	100	70.031	ENSXETG00000001784	cse1l	100	70.031	Xenopus_tropicalis
ENSCAPG00000000237	-	100	71.038	ENSXCOG00000000805	cse1l	100	71.038	Xiphophorus_couchianus
ENSCAPG00000000237	-	100	71.148	ENSXMAG00000001306	cse1l	100	71.148	Xiphophorus_maculatus