EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAPG00000000287 (Gene tree)
Gene ID: -
Gene Symbol: SYNJ2
Alias: INPP5H
Full Name: synaptojanin 2
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 83592 bases
Position: chrAVPZ01000356.1:11944555-12028146
Accession: 11504
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000000497	Exo_endo_phos	PF03372.23	3.5e-14	1	1
ENSCAPP00000000489	Exo_endo_phos	PF03372.23	6.6e-14	1	1
ENSCAPP00000000484	Exo_endo_phos	PF03372.23	7.2e-14	1	1
ENSCAPP00000000477	Exo_endo_phos	PF03372.23	9.6e-14	1	1
ENSCAPP00000000474	Exo_endo_phos	PF03372.23	9.8e-14	1	1
ENSCAPP00000000505	DUF1866	PF08952.11	2.4e-61	1	1
ENSCAPP00000000497	DUF1866	PF08952.11	7.4e-61	1	1
ENSCAPP00000000489	DUF1866	PF08952.11	1.2e-60	1	1
ENSCAPP00000000484	DUF1866	PF08952.11	1.3e-60	1	1
ENSCAPP00000000477	DUF1866	PF08952.11	1.7e-60	1	1
ENSCAPP00000000474	DUF1866	PF08952.11	1.7e-60	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000000498	SYNJ2-204	3348	-	ENSCAPP00000000489	1116 (aa)	-	-
ENSCAPT00000000482	SYNJ2-201	4251	-	ENSCAPP00000000474	1417 (aa)	-	-
ENSCAPT00000000492	SYNJ2-203	3579	-	ENSCAPP00000000484	1192 (aa)	-	-
ENSCAPT00000000523	SYNJ2-206	1161	-	ENSCAPP00000000505	386 (aa)	-	-
ENSCAPT00000000485	SYNJ2-202	4116	-	ENSCAPP00000000477	1372 (aa)	-	-
ENSCAPT00000000509	SYNJ2-205	2451	-	ENSCAPP00000000497	817 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000000287's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000000287's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAPG00000000287	SYNJ2	77	48.769	ENSCAPG00000014483	SYNJ1	66	48.039

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000000287	SYNJ2	100	83.299	ENSG00000078269	SYNJ2	99	82.049	Homo_sapiens
ENSCAPG00000000287	SYNJ2	96	85.851	ENSAMEG00000009581	SYNJ2	99	79.286	Ailuropoda_melanoleuca
ENSCAPG00000000287	SYNJ2	95	75.300	ENSAPLG00000002563	SYNJ2	96	68.334	Anas_platyrhynchos
ENSCAPG00000000287	SYNJ2	95	72.470	ENSACAG00000004945	SYNJ2	91	67.788	Anolis_carolinensis
ENSCAPG00000000287	SYNJ2	95	89.773	ENSANAG00000026575	SYNJ2	98	83.782	Aotus_nancymaae
ENSCAPG00000000287	SYNJ2	96	85.863	ENSBTAG00000000817	SYNJ2	96	79.834	Bos_taurus
ENSCAPG00000000287	SYNJ2	100	83.024	ENSCJAG00000003570	SYNJ2	93	88.113	Callithrix_jacchus
ENSCAPG00000000287	SYNJ2	96	87.326	ENSCAFG00000000644	SYNJ2	99	82.145	Canis_familiaris
ENSCAPG00000000287	SYNJ2	96	87.326	ENSCAFG00020015809	SYNJ2	98	83.939	Canis_lupus_dingo
ENSCAPG00000000287	SYNJ2	96	85.013	ENSCHIG00000011077	SYNJ2	96	79.899	Capra_hircus
ENSCAPG00000000287	SYNJ2	96	87.425	ENSTSYG00000014342	SYNJ2	93	87.947	Carlito_syrichta
ENSCAPG00000000287	SYNJ2	100	99.482	ENSCPOG00000009144	SYNJ2	100	99.482	Cavia_porcellus
ENSCAPG00000000287	SYNJ2	95	89.520	ENSCCAG00000025484	SYNJ2	93	87.781	Cebus_capucinus
ENSCAPG00000000287	SYNJ2	100	82.600	ENSCATG00000042943	SYNJ2	99	82.100	Cercocebus_atys
ENSCAPG00000000287	SYNJ2	100	97.409	ENSCLAG00000004730	SYNJ2	93	97.575	Chinchilla_lanigera
ENSCAPG00000000287	SYNJ2	100	82.737	ENSCSAG00000013130	SYNJ2	96	83.368	Chlorocebus_sabaeus
ENSCAPG00000000287	SYNJ2	96	75.533	ENSCPBG00000016273	SYNJ2	95	69.262	Chrysemys_picta_bellii
ENSCAPG00000000287	SYNJ2	100	83.437	ENSCANG00000040349	SYNJ2	96	87.458	Colobus_angolensis_palliatus
ENSCAPG00000000287	SYNJ2	95	90.139	ENSCGRG00001004257	Synj2	97	90.392	Cricetulus_griseus_chok1gshd
ENSCAPG00000000287	SYNJ2	100	90.155	ENSCGRG00000001656	Synj2	100	90.415	Cricetulus_griseus_crigri
ENSCAPG00000000287	SYNJ2	96	78.017	ENSDNOG00000015900	SYNJ2	97	80.884	Dasypus_novemcinctus
ENSCAPG00000000287	SYNJ2	95	88.622	ENSDORG00000014128	Synj2	97	82.032	Dipodomys_ordii
ENSCAPG00000000287	SYNJ2	85	91.304	ENSETEG00000017418	SYNJ2	81	91.304	Echinops_telfairi
ENSCAPG00000000287	SYNJ2	96	87.587	ENSEASG00005018902	SYNJ2	96	83.160	Equus_asinus_asinus
ENSCAPG00000000287	SYNJ2	96	87.934	ENSECAG00000012646	SYNJ2	90	83.507	Equus_caballus
ENSCAPG00000000287	SYNJ2	61	78.571	ENSEEUG00000015796	-	57	78.571	Erinaceus_europaeus
ENSCAPG00000000287	SYNJ2	97	85.568	ENSFCAG00000010854	SYNJ2	93	86.862	Felis_catus
ENSCAPG00000000287	SYNJ2	95	73.864	ENSFALG00000012593	SYNJ2	98	66.574	Ficedula_albicollis
ENSCAPG00000000287	SYNJ2	100	95.337	ENSFDAG00000016352	SYNJ2	100	95.337	Fukomys_damarensis
ENSCAPG00000000287	SYNJ2	95	75.303	ENSGALG00000013727	SYNJ2	95	66.481	Gallus_gallus
ENSCAPG00000000287	SYNJ2	96	75.298	ENSGAGG00000009857	SYNJ2	95	68.900	Gopherus_agassizii
ENSCAPG00000000287	SYNJ2	100	83.437	ENSGGOG00000012210	SYNJ2	93	87.708	Gorilla_gorilla
ENSCAPG00000000287	SYNJ2	100	96.632	ENSHGLG00000007534	SYNJ2	97	93.193	Heterocephalus_glaber_female
ENSCAPG00000000287	SYNJ2	100	96.632	ENSHGLG00100009973	SYNJ2	100	96.632	Heterocephalus_glaber_male
ENSCAPG00000000287	SYNJ2	96	89.655	ENSSTOG00000016474	SYNJ2	99	85.312	Ictidomys_tridecemlineatus
ENSCAPG00000000287	SYNJ2	94	89.691	ENSJJAG00000014436	Synj2	100	83.161	Jaculus_jaculus
ENSCAPG00000000287	SYNJ2	84	70.529	ENSLACG00000007316	SYNJ2	98	66.197	Latimeria_chalumnae
ENSCAPG00000000287	SYNJ2	95	87.231	ENSLAFG00000011979	SYNJ2	99	80.643	Loxodonta_africana
ENSCAPG00000000287	SYNJ2	100	78.685	ENSMFAG00000040552	SYNJ2	96	85.207	Macaca_fascicularis
ENSCAPG00000000287	SYNJ2	95	84.689	ENSMMUG00000007153	SYNJ2	96	87.154	Macaca_mulatta
ENSCAPG00000000287	SYNJ2	95	89.507	ENSMNEG00000017211	SYNJ2	99	82.259	Macaca_nemestrina
ENSCAPG00000000287	SYNJ2	100	79.574	ENSMLEG00000024911	SYNJ2	96	80.193	Mandrillus_leucophaeus
ENSCAPG00000000287	SYNJ2	95	73.917	ENSMGAG00000012839	SYNJ2	99	71.186	Meleagris_gallopavo
ENSCAPG00000000287	SYNJ2	100	90.415	ENSMAUG00000022212	Synj2	100	90.674	Mesocricetus_auratus
ENSCAPG00000000287	SYNJ2	100	82.231	ENSMICG00000015804	SYNJ2	99	80.681	Microcebus_murinus
ENSCAPG00000000287	SYNJ2	100	91.451	ENSMOCG00000020054	Synj2	100	91.451	Microtus_ochrogaster
ENSCAPG00000000287	SYNJ2	96	83.362	ENSMODG00000007783	SYNJ2	96	76.479	Monodelphis_domestica
ENSCAPG00000000287	SYNJ2	100	88.601	MGP_CAROLIEiJ_G0021026	Synj2	100	88.601	Mus_caroli
ENSCAPG00000000287	SYNJ2	100	88.860	ENSMUSG00000023805	Synj2	100	88.860	Mus_musculus
ENSCAPG00000000287	SYNJ2	100	89.637	MGP_PahariEiJ_G0023344	Synj2	100	89.637	Mus_pahari
ENSCAPG00000000287	SYNJ2	100	87.824	MGP_SPRETEiJ_G0021931	Synj2	100	87.824	Mus_spretus
ENSCAPG00000000287	SYNJ2	97	83.518	ENSMPUG00000005323	SYNJ2	95	83.017	Mustela_putorius_furo
ENSCAPG00000000287	SYNJ2	96	85.677	ENSMLUG00000000324	SYNJ2	99	80.156	Myotis_lucifugus
ENSCAPG00000000287	SYNJ2	100	91.451	ENSNGAG00000014859	Synj2	100	91.451	Nannospalax_galili
ENSCAPG00000000287	SYNJ2	100	81.142	ENSNLEG00000010750	SYNJ2	93	84.934	Nomascus_leucogenys
ENSCAPG00000000287	SYNJ2	95	79.655	ENSMEUG00000003493	SYNJ2	94	79.655	Notamacropus_eugenii
ENSCAPG00000000287	SYNJ2	90	84.230	ENSOPRG00000009648	SYNJ2	89	76.572	Ochotona_princeps
ENSCAPG00000000287	SYNJ2	100	95.337	ENSODEG00000007709	SYNJ2	100	95.337	Octodon_degus
ENSCAPG00000000287	SYNJ2	90	65.000	ENSOANG00000029828	-	99	60.693	Ornithorhynchus_anatinus
ENSCAPG00000000287	SYNJ2	100	80.453	ENSOCUG00000004762	SYNJ2	99	80.812	Oryctolagus_cuniculus
ENSCAPG00000000287	SYNJ2	95	82.725	ENSOGAG00000000488	SYNJ2	99	86.352	Otolemur_garnettii
ENSCAPG00000000287	SYNJ2	96	85.863	ENSOARG00000004304	SYNJ2	99	79.749	Ovis_aries
ENSCAPG00000000287	SYNJ2	100	83.333	ENSPPAG00000028831	SYNJ2	96	82.989	Pan_paniscus
ENSCAPG00000000287	SYNJ2	97	85.482	ENSPPRG00000009068	SYNJ2	93	86.778	Panthera_pardus
ENSCAPG00000000287	SYNJ2	97	85.312	ENSPTIG00000018780	SYNJ2	93	86.611	Panthera_tigris_altaica
ENSCAPG00000000287	SYNJ2	95	89.886	ENSPTRG00000018739	SYNJ2	96	87.490	Pan_troglodytes
ENSCAPG00000000287	SYNJ2	95	89.760	ENSPANG00000010755	SYNJ2	93	87.791	Papio_anubis
ENSCAPG00000000287	SYNJ2	95	75.430	ENSPSIG00000014659	SYNJ2	98	68.244	Pelodiscus_sinensis
ENSCAPG00000000287	SYNJ2	100	91.451	ENSPEMG00000006247	Synj2	100	91.451	Peromyscus_maniculatus_bairdii
ENSCAPG00000000287	SYNJ2	95	85.227	ENSPCIG00000010179	SYNJ2	99	76.638	Phascolarctos_cinereus
ENSCAPG00000000287	SYNJ2	100	83.703	ENSPPYG00000017130	SYNJ2	96	83.495	Pongo_abelii
ENSCAPG00000000287	SYNJ2	86	88.710	ENSPCAG00000009217	SYNJ2	82	88.710	Procavia_capensis
ENSCAPG00000000287	SYNJ2	96	88.103	ENSPCOG00000026910	SYNJ2	93	88.362	Propithecus_coquereli
ENSCAPG00000000287	SYNJ2	100	78.720	ENSPVAG00000006131	SYNJ2	96	78.611	Pteropus_vampyrus
ENSCAPG00000000287	SYNJ2	100	89.378	ENSRNOG00000017114	Synj2	97	86.538	Rattus_norvegicus
ENSCAPG00000000287	SYNJ2	100	81.969	ENSRBIG00000044126	SYNJ2	97	81.692	Rhinopithecus_bieti
ENSCAPG00000000287	SYNJ2	100	83.575	ENSRROG00000027755	SYNJ2	93	87.625	Rhinopithecus_roxellana
ENSCAPG00000000287	SYNJ2	100	82.474	ENSSBOG00000034876	SYNJ2	99	83.002	Saimiri_boliviensis_boliviensis
ENSCAPG00000000287	SYNJ2	96	83.448	ENSSHAG00000018881	SYNJ2	99	76.818	Sarcophilus_harrisii
ENSCAPG00000000287	SYNJ2	96	74.182	ENSSPUG00000000491	SYNJ2	92	70.244	Sphenodon_punctatus
ENSCAPG00000000287	SYNJ2	97	85.824	ENSSSCG00000012315	SYNJ2	93	86.946	Sus_scrofa
ENSCAPG00000000287	SYNJ2	94	73.374	ENSTGUG00000011082	SYNJ2	98	71.299	Taeniopygia_guttata
ENSCAPG00000000287	SYNJ2	79	89.655	ENSTBEG00000015827	SYNJ2	84	76.506	Tupaia_belangeri
ENSCAPG00000000287	SYNJ2	100	76.736	ENSTTRG00000009677	SYNJ2	96	76.784	Tursiops_truncatus
ENSCAPG00000000287	SYNJ2	90	78.061	ENSUAMG00000021958	-	97	77.691	Ursus_americanus
ENSCAPG00000000287	SYNJ2	97	85.856	ENSUMAG00000012826	SYNJ2	96	82.420	Ursus_maritimus
ENSCAPG00000000287	SYNJ2	89	92.105	ENSVVUG00000007407	SYNJ2	99	84.328	Vulpes_vulpes
ENSCAPG00000000287	SYNJ2	96	65.043	ENSXETG00000034066	synj2	82	65.514	Xenopus_tropicalis