EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAPG00000000384 (Gene tree)
Gene ID: -
Gene Symbol: SBNO1
Alias: FLJ10701|FLJ10833|MOP3|Sno
Full Name: strawberry notch homolog 1
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 41902 bases
Position: chrAVPZ01000018.1:379471-421372
Accession: 22973
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000000561	ResIII	PF04851.15	4.5e-08	1	1
ENSCAPP00000000553	ResIII	PF04851.15	5.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000000613	SBNO1-201	3996	-	ENSCAPP00000000553	1331 (aa)	-	-
ENSCAPT00000000630	SBNO1-202	3711	-	ENSCAPP00000000561	1236 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000000384's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000000384's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAPG00000000384	SBNO1	83	58.111	ENSCAPG00000005731	SBNO2	78	68.481

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000000384	SBNO1	100	97.521	ENSG00000139697	SBNO1	96	97.521	Homo_sapiens
ENSCAPG00000000384	SBNO1	86	83.393	ENSAPOG00000003196	sbno1	98	80.911	Acanthochromis_polyacanthus
ENSCAPG00000000384	SBNO1	100	97.976	ENSAMEG00000015151	SBNO1	96	97.976	Ailuropoda_melanoleuca
ENSCAPG00000000384	SBNO1	99	82.105	ENSACIG00000008088	sbno1	98	76.236	Amphilophus_citrinellus
ENSCAPG00000000384	SBNO1	99	82.679	ENSAOCG00000014859	sbno1	89	82.679	Amphiprion_ocellaris
ENSCAPG00000000384	SBNO1	99	82.679	ENSAPEG00000006069	sbno1	89	82.679	Amphiprion_percula
ENSCAPG00000000384	SBNO1	99	84.991	ENSATEG00000006667	sbno1	90	84.991	Anabas_testudineus
ENSCAPG00000000384	SBNO1	99	94.756	ENSAPLG00000015674	SBNO1	96	92.412	Anas_platyrhynchos
ENSCAPG00000000384	SBNO1	99	93.548	ENSACAG00000015441	SBNO1	86	89.395	Anolis_carolinensis
ENSCAPG00000000384	SBNO1	99	98.734	ENSANAG00000029958	-	96	98.734	Aotus_nancymaae
ENSCAPG00000000384	SBNO1	98	77.217	ENSACLG00000024913	sbno1	97	77.432	Astatotilapia_calliptera
ENSCAPG00000000384	SBNO1	99	87.027	ENSAMXG00000019473	sbno1	96	81.413	Astyanax_mexicanus
ENSCAPG00000000384	SBNO1	99	98.045	ENSBTAG00000020505	SBNO1	97	97.731	Bos_taurus
ENSCAPG00000000384	SBNO1	99	99.096	ENSCJAG00000016599	SBNO1	96	97.446	Callithrix_jacchus
ENSCAPG00000000384	SBNO1	100	98.050	ENSCAFG00000007503	SBNO1	100	95.553	Canis_familiaris
ENSCAPG00000000384	SBNO1	100	97.295	ENSCAFG00020015363	SBNO1	97	97.961	Canis_lupus_dingo
ENSCAPG00000000384	SBNO1	99	98.133	ENSCHIG00000008382	SBNO1	97	98.739	Capra_hircus
ENSCAPG00000000384	SBNO1	99	99.458	ENSTSYG00000012749	SBNO1	97	97.808	Carlito_syrichta
ENSCAPG00000000384	SBNO1	100	99.925	ENSCPOG00000008109	SBNO1	97	100.000	Cavia_porcellus
ENSCAPG00000000384	SBNO1	99	94.638	ENSCCAG00000035316	SBNO1	97	92.447	Cebus_capucinus
ENSCAPG00000000384	SBNO1	99	99.277	ENSCATG00000008239	SBNO1	98	99.277	Cercocebus_atys
ENSCAPG00000000384	SBNO1	99	99.640	ENSCLAG00000008995	SBNO1	97	99.640	Chinchilla_lanigera
ENSCAPG00000000384	SBNO1	87	98.100	ENSCSAG00000002064	SBNO1	100	98.100	Chlorocebus_sabaeus
ENSCAPG00000000384	SBNO1	95	99.024	ENSCHOG00000008814	SBNO1	91	94.070	Choloepus_hoffmanni
ENSCAPG00000000384	SBNO1	99	94.964	ENSCPBG00000025968	SBNO1	96	92.331	Chrysemys_picta_bellii
ENSCAPG00000000384	SBNO1	100	91.973	ENSCANG00000042688	-	95	91.898	Colobus_angolensis_palliatus
ENSCAPG00000000384	SBNO1	99	97.879	ENSCGRG00001017470	Sbno1	97	98.011	Cricetulus_griseus_chok1gshd
ENSCAPG00000000384	SBNO1	99	97.879	ENSCGRG00000004756	Sbno1	97	98.011	Cricetulus_griseus_crigri
ENSCAPG00000000384	SBNO1	99	83.363	ENSCSEG00000011919	sbno1	96	76.510	Cynoglossus_semilaevis
ENSCAPG00000000384	SBNO1	99	83.303	ENSCVAG00000007038	sbno1	91	83.303	Cyprinodon_variegatus
ENSCAPG00000000384	SBNO1	99	86.438	ENSDARG00000099080	sbno1	96	80.896	Danio_rerio
ENSCAPG00000000384	SBNO1	100	96.622	ENSDNOG00000017147	SBNO1	97	97.275	Dasypus_novemcinctus
ENSCAPG00000000384	SBNO1	94	97.865	ENSDORG00000015261	Sbno1	95	96.835	Dipodomys_ordii
ENSCAPG00000000384	SBNO1	93	91.223	ENSETEG00000005620	SBNO1	89	91.223	Echinops_telfairi
ENSCAPG00000000384	SBNO1	71	84.729	ENSEBUG00000013823	sbno1	75	84.729	Eptatretus_burgeri
ENSCAPG00000000384	SBNO1	51	96.530	ENSEASG00005012595	-	87	97.966	Equus_asinus_asinus
ENSCAPG00000000384	SBNO1	100	98.272	ENSECAG00000006127	SBNO1	98	98.272	Equus_caballus
ENSCAPG00000000384	SBNO1	80	99.451	ENSEEUG00000003793	SBNO1	77	99.451	Erinaceus_europaeus
ENSCAPG00000000384	SBNO1	99	86.667	ENSELUG00000002886	sbno1	91	86.667	Esox_lucius
ENSCAPG00000000384	SBNO1	99	98.396	ENSFCAG00000015331	SBNO1	95	98.271	Felis_catus
ENSCAPG00000000384	SBNO1	99	94.937	ENSFALG00000009273	SBNO1	96	92.267	Ficedula_albicollis
ENSCAPG00000000384	SBNO1	99	96.692	ENSFDAG00000014232	SBNO1	97	96.290	Fukomys_damarensis
ENSCAPG00000000384	SBNO1	99	83.483	ENSFHEG00000007360	sbno1	91	83.483	Fundulus_heteroclitus
ENSCAPG00000000384	SBNO1	98	84.404	ENSGMOG00000018229	sbno1	99	78.479	Gadus_morhua
ENSCAPG00000000384	SBNO1	86	96.447	ENSGALG00000003392	SBNO1	94	92.564	Gallus_gallus
ENSCAPG00000000384	SBNO1	99	83.662	ENSGAFG00000003960	sbno1	92	83.393	Gambusia_affinis
ENSCAPG00000000384	SBNO1	98	84.672	ENSGACG00000015633	sbno1	94	84.672	Gasterosteus_aculeatus
ENSCAPG00000000384	SBNO1	99	95.144	ENSGAGG00000001065	SBNO1	96	95.118	Gopherus_agassizii
ENSCAPG00000000384	SBNO1	99	98.399	ENSGGOG00000015000	SBNO1	97	99.281	Gorilla_gorilla
ENSCAPG00000000384	SBNO1	98	71.157	ENSHBUG00000011910	sbno1	97	71.407	Haplochromis_burtoni
ENSCAPG00000000384	SBNO1	99	99.640	ENSHGLG00000014165	-	96	99.638	Heterocephalus_glaber_female
ENSCAPG00000000384	SBNO1	89	85.178	ENSHCOG00000003246	sbno1	92	85.178	Hippocampus_comes
ENSCAPG00000000384	SBNO1	99	86.151	ENSIPUG00000015830	Sbno1	87	89.516	Ictalurus_punctatus
ENSCAPG00000000384	SBNO1	100	97.971	ENSSTOG00000023221	SBNO1	97	99.458	Ictidomys_tridecemlineatus
ENSCAPG00000000384	SBNO1	100	97.596	ENSJJAG00000001741	Sbno1	96	97.596	Jaculus_jaculus
ENSCAPG00000000384	SBNO1	99	84.545	ENSKMAG00000009696	sbno1	91	84.545	Kryptolebias_marmoratus
ENSCAPG00000000384	SBNO1	99	85.533	ENSLBEG00000007623	sbno1	90	85.533	Labrus_bergylta
ENSCAPG00000000384	SBNO1	95	87.122	ENSLACG00000017227	SBNO1	95	84.484	Latimeria_chalumnae
ENSCAPG00000000384	SBNO1	99	88.669	ENSLOCG00000005725	sbno1	89	88.669	Lepisosteus_oculatus
ENSCAPG00000000384	SBNO1	100	97.220	ENSLAFG00000002135	SBNO1	96	97.220	Loxodonta_africana
ENSCAPG00000000384	SBNO1	100	97.370	ENSMFAG00000031429	SBNO1	96	97.370	Macaca_fascicularis
ENSCAPG00000000384	SBNO1	100	97.370	ENSMMUG00000011496	SBNO1	96	97.370	Macaca_mulatta
ENSCAPG00000000384	SBNO1	99	99.277	ENSMLEG00000033260	SBNO1	97	99.277	Mandrillus_leucophaeus
ENSCAPG00000000384	SBNO1	99	85.172	ENSMAMG00000005473	sbno1	90	85.172	Mastacembelus_armatus
ENSCAPG00000000384	SBNO1	99	95.118	ENSMGAG00000003274	SBNO1	96	92.417	Meleagris_gallopavo
ENSCAPG00000000384	SBNO1	50	98.217	ENSMAUG00000004834	-	95	97.138	Mesocricetus_auratus
ENSCAPG00000000384	SBNO1	100	96.769	ENSMICG00000006573	-	97	96.523	Microcebus_murinus
ENSCAPG00000000384	SBNO1	99	98.042	ENSMOCG00000009390	Sbno1	97	98.381	Microtus_ochrogaster
ENSCAPG00000000384	SBNO1	98	84.107	ENSMMOG00000008691	sbno1	91	83.750	Mola_mola
ENSCAPG00000000384	SBNO1	99	97.101	ENSMODG00000012470	SBNO1	94	94.662	Monodelphis_domestica
ENSCAPG00000000384	SBNO1	99	83.485	ENSMALG00000001056	sbno1	90	83.485	Monopterus_albus
ENSCAPG00000000384	SBNO1	99	99.094	MGP_CAROLIEiJ_G0027749	Sbno1	95	98.684	Mus_caroli
ENSCAPG00000000384	SBNO1	99	98.217	ENSMUSG00000038095	Sbno1	96	97.444	Mus_musculus
ENSCAPG00000000384	SBNO1	99	98.564	MGP_PahariEiJ_G0024329	Sbno1	95	98.684	Mus_pahari
ENSCAPG00000000384	SBNO1	99	99.094	MGP_SPRETEiJ_G0028747	Sbno1	95	98.684	Mus_spretus
ENSCAPG00000000384	SBNO1	100	98.399	ENSMPUG00000001658	SBNO1	96	98.197	Mustela_putorius_furo
ENSCAPG00000000384	SBNO1	100	97.671	ENSMLUG00000017159	SBNO1	96	97.671	Myotis_lucifugus
ENSCAPG00000000384	SBNO1	100	97.746	ENSNGAG00000012620	Sbno1	95	99.211	Nannospalax_galili
ENSCAPG00000000384	SBNO1	98	77.005	ENSNBRG00000019189	sbno1	97	77.069	Neolamprologus_brichardi
ENSCAPG00000000384	SBNO1	99	94.638	ENSNLEG00000001502	SBNO1	97	94.101	Nomascus_leucogenys
ENSCAPG00000000384	SBNO1	58	95.699	ENSMEUG00000008768	-	86	85.443	Notamacropus_eugenii
ENSCAPG00000000384	SBNO1	99	97.473	ENSOPRG00000011054	SBNO1	95	94.069	Ochotona_princeps
ENSCAPG00000000384	SBNO1	99	99.640	ENSODEG00000009997	SBNO1	97	98.702	Octodon_degus
ENSCAPG00000000384	SBNO1	99	83.574	ENSONIG00000015348	sbno1	95	76.600	Oreochromis_niloticus
ENSCAPG00000000384	SBNO1	98	96.045	ENSOCUG00000002441	SBNO1	90	95.951	Oryctolagus_cuniculus
ENSCAPG00000000384	SBNO1	99	83.002	ENSORLG00000001593	sbno1	96	76.475	Oryzias_latipes
ENSCAPG00000000384	SBNO1	99	83.002	ENSORLG00020015216	sbno1	89	83.002	Oryzias_latipes_hni
ENSCAPG00000000384	SBNO1	99	83.183	ENSORLG00015002726	sbno1	96	76.531	Oryzias_latipes_hsok
ENSCAPG00000000384	SBNO1	99	83.303	ENSOMEG00000019313	sbno1	96	76.832	Oryzias_melastigma
ENSCAPG00000000384	SBNO1	99	97.861	ENSOARG00000004404	SBNO1	95	97.673	Ovis_aries
ENSCAPG00000000384	SBNO1	100	97.521	ENSPPAG00000024635	SBNO1	97	99.101	Pan_paniscus
ENSCAPG00000000384	SBNO1	99	98.396	ENSPPRG00000022092	SBNO1	95	98.271	Panthera_pardus
ENSCAPG00000000384	SBNO1	100	98.272	ENSPTIG00000017803	SBNO1	96	98.272	Panthera_tigris_altaica
ENSCAPG00000000384	SBNO1	100	97.596	ENSPTRG00000005597	SBNO1	97	99.281	Pan_troglodytes
ENSCAPG00000000384	SBNO1	99	99.277	ENSPANG00000011640	SBNO1	97	99.277	Papio_anubis
ENSCAPG00000000384	SBNO1	99	86.486	ENSPKIG00000001441	sbno1	95	81.668	Paramormyrops_kingsleyae
ENSCAPG00000000384	SBNO1	99	94.424	ENSPSIG00000009572	-	97	91.925	Pelodiscus_sinensis
ENSCAPG00000000384	SBNO1	90	91.216	ENSPSIG00000009256	-	95	88.327	Pelodiscus_sinensis
ENSCAPG00000000384	SBNO1	100	96.844	ENSPEMG00000016087	Sbno1	97	98.011	Peromyscus_maniculatus_bairdii
ENSCAPG00000000384	SBNO1	99	96.739	ENSPCIG00000010985	SBNO1	97	93.958	Phascolarctos_cinereus
ENSCAPG00000000384	SBNO1	99	83.662	ENSPFOG00000005069	sbno1	91	83.662	Poecilia_formosa
ENSCAPG00000000384	SBNO1	99	83.662	ENSPLAG00000015015	sbno1	91	83.662	Poecilia_latipinna
ENSCAPG00000000384	SBNO1	99	83.662	ENSPMEG00000021212	sbno1	96	77.379	Poecilia_mexicana
ENSCAPG00000000384	SBNO1	99	83.303	ENSPREG00000017746	sbno1	96	77.013	Poecilia_reticulata
ENSCAPG00000000384	SBNO1	99	99.277	ENSPPYG00000005084	SBNO1	96	97.220	Pongo_abelii
ENSCAPG00000000384	SBNO1	92	89.908	ENSPCAG00000008634	SBNO1	84	92.331	Procavia_capensis
ENSCAPG00000000384	SBNO1	100	98.047	ENSPCOG00000024277	SBNO1	96	98.909	Propithecus_coquereli
ENSCAPG00000000384	SBNO1	92	99.206	ENSPVAG00000015304	SBNO1	83	99.206	Pteropus_vampyrus
ENSCAPG00000000384	SBNO1	99	83.574	ENSPNYG00000004291	sbno1	95	76.787	Pundamilia_nyererei
ENSCAPG00000000384	SBNO1	99	87.590	ENSPNAG00000015622	sbno1	91	87.590	Pygocentrus_nattereri
ENSCAPG00000000384	SBNO1	99	98.217	ENSRNOG00000001064	Sbno1	97	99.099	Rattus_norvegicus
ENSCAPG00000000384	SBNO1	100	97.521	ENSRROG00000034230	SBNO1	97	99.277	Rhinopithecus_roxellana
ENSCAPG00000000384	SBNO1	100	92.337	ENSSBOG00000015422	SBNO1	99	92.337	Saimiri_boliviensis_boliviensis
ENSCAPG00000000384	SBNO1	99	86.486	ENSSFOG00015019025	sbno1	97	81.208	Scleropages_formosus
ENSCAPG00000000384	SBNO1	99	83.725	ENSSMAG00000013640	sbno1	90	83.725	Scophthalmus_maximus
ENSCAPG00000000384	SBNO1	99	84.810	ENSSDUG00000023480	sbno1	90	84.810	Seriola_dumerili
ENSCAPG00000000384	SBNO1	99	84.810	ENSSLDG00000007928	sbno1	90	84.810	Seriola_lalandi_dorsalis
ENSCAPG00000000384	SBNO1	90	97.865	ENSSARG00000002594	SBNO1	85	98.058	Sorex_araneus
ENSCAPG00000000384	SBNO1	99	93.682	ENSSPUG00000012640	SBNO1	97	90.785	Sphenodon_punctatus
ENSCAPG00000000384	SBNO1	99	83.124	ENSSPAG00000016244	sbno1	91	83.124	Stegastes_partitus
ENSCAPG00000000384	SBNO1	100	98.122	ENSSSCG00000009776	SBNO1	97	97.882	Sus_scrofa
ENSCAPG00000000384	SBNO1	99	95.118	ENSTGUG00000005380	SBNO1	96	92.342	Taeniopygia_guttata
ENSCAPG00000000384	SBNO1	99	84.629	ENSTRUG00000018490	sbno1	91	84.629	Takifugu_rubripes
ENSCAPG00000000384	SBNO1	55	72.245	ENSTNIG00000013506	sbno1	92	72.617	Tetraodon_nigroviridis
ENSCAPG00000000384	SBNO1	100	98.122	ENSUAMG00000019671	SBNO1	96	98.122	Ursus_americanus
ENSCAPG00000000384	SBNO1	100	98.122	ENSUMAG00000004002	SBNO1	96	98.122	Ursus_maritimus
ENSCAPG00000000384	SBNO1	95	95.652	ENSVPAG00000007024	SBNO1	91	95.652	Vicugna_pacos
ENSCAPG00000000384	SBNO1	100	98.272	ENSVVUG00000027807	SBNO1	96	98.272	Vulpes_vulpes
ENSCAPG00000000384	SBNO1	99	91.622	ENSXETG00000031930	SBNO1	89	91.622	Xenopus_tropicalis
ENSCAPG00000000384	SBNO1	86	86.089	ENSXCOG00000011607	sbno1	85	85.864	Xiphophorus_couchianus
ENSCAPG00000000384	SBNO1	99	83.303	ENSXMAG00000002140	sbno1	91	83.303	Xiphophorus_maculatus