EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAPG00000001482 (Gene tree)
Gene ID: -
Gene Symbol: DDX54
Alias: APR-5|DP97|MGC2835
Full Name: DEAD-box helicase 54
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Minus strand
Length: 12080 bases
Position: chrAVPZ01000116.1:41042-53121
Accession: 20084
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000001001	DBP10CT	PF08147.12	4.1e-18	1	1
ENSCAPP00000001001	ResIII	PF04851.15	2.2e-06	1	1
ENSCAPP00000001008	ResIII	PF04851.15	2.3e-06	1	1
ENSCAPP00000001008	DEAD	PF00270.29	1.8e-50	1	1
ENSCAPP00000001001	DEAD	PF00270.29	2e-50	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000001782	DDX54-201	2556	-	ENSCAPP00000001001	851 (aa)	-	-
ENSCAPT00000001795	DDX54-202	2370	-	ENSCAPP00000001008	789 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000001482's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000001482's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAPG00000001482	DDX54	55	32.511	ENSCAPG00000004039	DDX18	70	32.438

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000001482	DDX54	99	81.873	ENSG00000123064	DDX54	100	96.154	Homo_sapiens
ENSCAPG00000001482	DDX54	94	60.809	ENSAPOG00000008602	ddx54	98	60.172	Acanthochromis_polyacanthus
ENSCAPG00000001482	DDX54	99	82.805	ENSAMEG00000008775	DDX54	93	86.463	Ailuropoda_melanoleuca
ENSCAPG00000001482	DDX54	99	60.684	ENSACIG00000019104	ddx54	95	61.836	Amphilophus_citrinellus
ENSCAPG00000001482	DDX54	94	60.330	ENSAOCG00000008449	ddx54	95	61.697	Amphiprion_ocellaris
ENSCAPG00000001482	DDX54	94	60.330	ENSAPEG00000014287	ddx54	95	61.697	Amphiprion_percula
ENSCAPG00000001482	DDX54	99	58.525	ENSATEG00000018529	ddx54	95	61.501	Anabas_testudineus
ENSCAPG00000001482	DDX54	95	69.325	ENSAPLG00000013191	DDX54	100	69.571	Anas_platyrhynchos
ENSCAPG00000001482	DDX54	95	68.176	ENSACAG00000004703	DDX54	96	67.980	Anolis_carolinensis
ENSCAPG00000001482	DDX54	94	72.786	ENSANAG00000032241	-	95	76.240	Aotus_nancymaae
ENSCAPG00000001482	DDX54	99	72.376	ENSANAG00000032761	-	93	75.937	Aotus_nancymaae
ENSCAPG00000001482	DDX54	99	59.562	ENSACLG00000013176	ddx54	95	62.027	Astatotilapia_calliptera
ENSCAPG00000001482	DDX54	99	56.763	ENSAMXG00000009189	ddx54	95	59.951	Astyanax_mexicanus
ENSCAPG00000001482	DDX54	95	86.430	ENSBTAG00000011930	DDX54	88	86.430	Bos_taurus
ENSCAPG00000001482	DDX54	92	42.323	WBGene00022378	Y94H6A.5	92	45.161	Caenorhabditis_elegans
ENSCAPG00000001482	DDX54	88	87.698	ENSCJAG00000010039	DDX54	82	87.698	Callithrix_jacchus
ENSCAPG00000001482	DDX54	66	81.371	ENSCAFG00000009029	DDX54	99	81.722	Canis_familiaris
ENSCAPG00000001482	DDX54	99	82.641	ENSCAFG00020017643	DDX54	93	86.186	Canis_lupus_dingo
ENSCAPG00000001482	DDX54	95	85.000	ENSCHIG00000026798	DDX54	93	85.000	Capra_hircus
ENSCAPG00000001482	DDX54	99	79.440	ENSTSYG00000007898	DDX54	94	82.968	Carlito_syrichta
ENSCAPG00000001482	DDX54	99	93.057	ENSCPOG00000020649	DDX54	94	96.472	Cavia_porcellus
ENSCAPG00000001482	DDX54	99	82.460	ENSCCAG00000022625	DDX54	93	86.569	Cebus_capucinus
ENSCAPG00000001482	DDX54	99	81.896	ENSCATG00000041943	DDX54	93	85.541	Cercocebus_atys
ENSCAPG00000001482	DDX54	95	91.111	ENSCLAG00000010748	DDX54	93	91.111	Chinchilla_lanigera
ENSCAPG00000001482	DDX54	95	83.879	ENSCSAG00000002432	DDX54	90	84.121	Chlorocebus_sabaeus
ENSCAPG00000001482	DDX54	76	64.580	ENSCPBG00000017982	DDX54	85	64.417	Chrysemys_picta_bellii
ENSCAPG00000001482	DDX54	93	49.629	ENSCING00000004789	-	93	51.621	Ciona_intestinalis
ENSCAPG00000001482	DDX54	92	47.644	ENSCSAVG00000008916	-	98	66.265	Ciona_savignyi
ENSCAPG00000001482	DDX54	93	96.170	ENSCANG00000020637	DDX54	99	96.170	Colobus_angolensis_palliatus
ENSCAPG00000001482	DDX54	99	80.464	ENSCGRG00001014803	Ddx54	93	84.191	Cricetulus_griseus_chok1gshd
ENSCAPG00000001482	DDX54	99	80.268	ENSCGRG00000002827	Ddx54	93	83.985	Cricetulus_griseus_crigri
ENSCAPG00000001482	DDX54	92	59.715	ENSCSEG00000016462	ddx54	95	60.073	Cynoglossus_semilaevis
ENSCAPG00000001482	DDX54	99	58.354	ENSCVAG00000022404	ddx54	95	61.529	Cyprinodon_variegatus
ENSCAPG00000001482	DDX54	99	59.538	ENSDARG00000105286	ddx54	95	62.652	Danio_rerio
ENSCAPG00000001482	DDX54	95	84.521	ENSDNOG00000032913	DDX54	93	84.578	Dasypus_novemcinctus
ENSCAPG00000001482	DDX54	81	81.007	ENSDORG00000003399	Ddx54	95	81.143	Dipodomys_ordii
ENSCAPG00000001482	DDX54	89	42.932	FBgn0052344	CG32344	88	45.308	Drosophila_melanogaster
ENSCAPG00000001482	DDX54	56	97.241	ENSETEG00000008430	-	53	97.241	Echinops_telfairi
ENSCAPG00000001482	DDX54	83	60.061	ENSEBUG00000008886	ddx54	93	60.061	Eptatretus_burgeri
ENSCAPG00000001482	DDX54	88	83.071	ENSEASG00005009501	DDX54	100	76.220	Equus_asinus_asinus
ENSCAPG00000001482	DDX54	99	82.339	ENSECAG00000012890	DDX54	93	86.236	Equus_caballus
ENSCAPG00000001482	DDX54	63	94.937	ENSEEUG00000008296	-	68	94.937	Erinaceus_europaeus
ENSCAPG00000001482	DDX54	99	58.974	ENSELUG00000013533	ddx54	95	60.432	Esox_lucius
ENSCAPG00000001482	DDX54	99	81.907	ENSFCAG00000027806	DDX54	93	85.575	Felis_catus
ENSCAPG00000001482	DDX54	96	66.918	ENSFALG00000007737	DDX54	100	70.417	Ficedula_albicollis
ENSCAPG00000001482	DDX54	89	92.233	ENSFDAG00000019953	DDX54	93	92.233	Fukomys_damarensis
ENSCAPG00000001482	DDX54	99	59.058	ENSFHEG00000018425	ddx54	95	61.071	Fundulus_heteroclitus
ENSCAPG00000001482	DDX54	94	58.854	ENSGMOG00000011746	ddx54	95	61.323	Gadus_morhua
ENSCAPG00000001482	DDX54	95	69.458	ENSGALG00000007490	DDX54	97	69.410	Gallus_gallus
ENSCAPG00000001482	DDX54	99	58.896	ENSGAFG00000010336	ddx54	95	61.029	Gambusia_affinis
ENSCAPG00000001482	DDX54	99	56.190	ENSGACG00000016793	ddx54	95	57.701	Gasterosteus_aculeatus
ENSCAPG00000001482	DDX54	95	69.127	ENSGAGG00000022803	DDX54	100	69.182	Gopherus_agassizii
ENSCAPG00000001482	DDX54	99	82.017	ENSGGOG00000010414	DDX54	93	85.176	Gorilla_gorilla
ENSCAPG00000001482	DDX54	99	84.493	ENSHGLG00000014411	DDX54	93	87.775	Heterocephalus_glaber_female
ENSCAPG00000001482	DDX54	99	84.597	ENSHGLG00100018511	DDX54	93	87.882	Heterocephalus_glaber_male
ENSCAPG00000001482	DDX54	99	58.987	ENSHCOG00000019287	ddx54	95	61.145	Hippocampus_comes
ENSCAPG00000001482	DDX54	99	58.303	ENSIPUG00000015556	Ddx54	95	61.212	Ictalurus_punctatus
ENSCAPG00000001482	DDX54	89	84.625	ENSSTOG00000004068	DDX54	100	84.755	Ictidomys_tridecemlineatus
ENSCAPG00000001482	DDX54	95	85.749	ENSJJAG00000015712	Ddx54	93	85.907	Jaculus_jaculus
ENSCAPG00000001482	DDX54	99	58.191	ENSKMAG00000017520	ddx54	95	61.104	Kryptolebias_marmoratus
ENSCAPG00000001482	DDX54	99	56.936	ENSLBEG00000019480	ddx54	95	59.660	Labrus_bergylta
ENSCAPG00000001482	DDX54	93	65.920	ENSLACG00000008944	DDX54	92	65.934	Latimeria_chalumnae
ENSCAPG00000001482	DDX54	99	60.922	ENSLOCG00000008485	ddx54	95	64.093	Lepisosteus_oculatus
ENSCAPG00000001482	DDX54	94	70.075	ENSLAFG00000027782	DDX54	100	73.940	Loxodonta_africana
ENSCAPG00000001482	DDX54	99	82.039	ENSMFAG00000043636	DDX54	93	85.680	Macaca_fascicularis
ENSCAPG00000001482	DDX54	99	80.970	ENSMMUG00000021795	DDX54	93	84.606	Macaca_mulatta
ENSCAPG00000001482	DDX54	99	74.182	ENSMNEG00000043605	DDX54	93	77.939	Macaca_nemestrina
ENSCAPG00000001482	DDX54	99	77.306	ENSMLEG00000038981	DDX54	93	80.947	Mandrillus_leucophaeus
ENSCAPG00000001482	DDX54	99	58.993	ENSMAMG00000012784	ddx54	95	61.372	Mastacembelus_armatus
ENSCAPG00000001482	DDX54	99	59.440	ENSMZEG00005018773	ddx54	95	61.736	Maylandia_zebra
ENSCAPG00000001482	DDX54	95	67.597	ENSMGAG00000009183	DDX54	100	67.235	Meleagris_gallopavo
ENSCAPG00000001482	DDX54	99	81.074	ENSMAUG00000011051	Ddx54	93	84.926	Mesocricetus_auratus
ENSCAPG00000001482	DDX54	99	80.952	ENSMICG00000012217	DDX54	93	84.963	Microcebus_murinus
ENSCAPG00000001482	DDX54	99	80.220	ENSMOCG00000010835	Ddx54	93	84.069	Microtus_ochrogaster
ENSCAPG00000001482	DDX54	94	59.027	ENSMMOG00000009634	ddx54	95	59.681	Mola_mola
ENSCAPG00000001482	DDX54	99	70.574	ENSMODG00000003413	DDX54	97	74.907	Monodelphis_domestica
ENSCAPG00000001482	DDX54	99	59.367	ENSMALG00000022098	ddx54	95	61.858	Monopterus_albus
ENSCAPG00000001482	DDX54	99	80.098	MGP_CAROLIEiJ_G0027665	Ddx54	93	84.044	Mus_caroli
ENSCAPG00000001482	DDX54	95	84.069	ENSMUSG00000029599	Ddx54	93	84.191	Mus_musculus
ENSCAPG00000001482	DDX54	99	80.220	MGP_PahariEiJ_G0024247	Ddx54	93	83.902	Mus_pahari
ENSCAPG00000001482	DDX54	99	80.024	MGP_SPRETEiJ_G0028665	Ddx54	93	83.985	Mus_spretus
ENSCAPG00000001482	DDX54	99	82.317	ENSMPUG00000002574	DDX54	93	85.226	Mustela_putorius_furo
ENSCAPG00000001482	DDX54	99	80.340	ENSNGAG00000021313	Ddx54	93	83.639	Nannospalax_galili
ENSCAPG00000001482	DDX54	65	81.967	ENSNBRG00000005588	ddx54	70	81.967	Neolamprologus_brichardi
ENSCAPG00000001482	DDX54	99	82.051	ENSNLEG00000000162	DDX54	93	85.958	Nomascus_leucogenys
ENSCAPG00000001482	DDX54	81	75.907	ENSMEUG00000015392	DDX54	98	77.745	Notamacropus_eugenii
ENSCAPG00000001482	DDX54	87	75.067	ENSOPRG00000012000	DDX54	86	74.934	Ochotona_princeps
ENSCAPG00000001482	DDX54	99	83.130	ENSODEG00000014863	DDX54	93	86.781	Octodon_degus
ENSCAPG00000001482	DDX54	95	83.111	ENSOCUG00000008932	DDX54	93	82.160	Oryctolagus_cuniculus
ENSCAPG00000001482	DDX54	99	58.252	ENSORLG00000007385	ddx54	95	60.880	Oryzias_latipes
ENSCAPG00000001482	DDX54	99	58.566	ENSORLG00020000858	ddx54	95	61.247	Oryzias_latipes_hni
ENSCAPG00000001482	DDX54	99	58.131	ENSORLG00015006956	ddx54	95	60.780	Oryzias_latipes_hsok
ENSCAPG00000001482	DDX54	94	60.687	ENSOMEG00000003663	ddx54	96	61.436	Oryzias_melastigma
ENSCAPG00000001482	DDX54	99	81.907	ENSOGAG00000004210	DDX54	93	85.836	Otolemur_garnettii
ENSCAPG00000001482	DDX54	99	81.707	ENSOARG00000008363	DDX54	93	85.836	Ovis_aries
ENSCAPG00000001482	DDX54	99	80.630	ENSPPAG00000042178	DDX54	93	84.746	Pan_paniscus
ENSCAPG00000001482	DDX54	99	79.829	ENSPPRG00000005223	DDX54	93	83.883	Panthera_pardus
ENSCAPG00000001482	DDX54	61	95.312	ENSPTIG00000019728	DDX54	79	95.312	Panthera_tigris_altaica
ENSCAPG00000001482	DDX54	99	81.166	ENSPTRG00000005483	DDX54	93	85.055	Pan_troglodytes
ENSCAPG00000001482	DDX54	99	80.848	ENSPANG00000008883	DDX54	93	84.485	Papio_anubis
ENSCAPG00000001482	DDX54	99	59.515	ENSPKIG00000018272	ddx54	94	62.530	Paramormyrops_kingsleyae
ENSCAPG00000001482	DDX54	59	80.172	ENSPSIG00000005055	DDX54	96	80.172	Pelodiscus_sinensis
ENSCAPG00000001482	DDX54	99	56.687	ENSPMGG00000010988	ddx54	99	58.282	Periophthalmus_magnuspinnatus
ENSCAPG00000001482	DDX54	99	81.441	ENSPEMG00000016701	Ddx54	93	85.262	Peromyscus_maniculatus_bairdii
ENSCAPG00000001482	DDX54	50	78.372	ENSPMAG00000004337	ddx54	99	78.372	Petromyzon_marinus
ENSCAPG00000001482	DDX54	99	58.809	ENSPFOG00000019822	ddx54	95	61.267	Poecilia_formosa
ENSCAPG00000001482	DDX54	99	58.596	ENSPLAG00000004530	ddx54	95	61.145	Poecilia_latipinna
ENSCAPG00000001482	DDX54	99	58.475	ENSPMEG00000010803	ddx54	95	61.023	Poecilia_mexicana
ENSCAPG00000001482	DDX54	99	58.688	ENSPREG00000014372	ddx54	95	61.247	Poecilia_reticulata
ENSCAPG00000001482	DDX54	99	81.311	ENSPPYG00000004984	DDX54	93	85.194	Pongo_abelii
ENSCAPG00000001482	DDX54	99	75.672	ENSPCAG00000008462	DDX54	93	79.095	Procavia_capensis
ENSCAPG00000001482	DDX54	99	82.173	ENSPCOG00000006050	DDX54	93	84.982	Propithecus_coquereli
ENSCAPG00000001482	DDX54	88	95.259	ENSPVAG00000017347	DDX54	93	74.419	Pteropus_vampyrus
ENSCAPG00000001482	DDX54	95	58.824	ENSPNAG00000014459	ddx54	91	66.158	Pygocentrus_nattereri
ENSCAPG00000001482	DDX54	95	83.333	ENSRNOG00000001377	Ddx54	89	83.211	Rattus_norvegicus
ENSCAPG00000001482	DDX54	99	81.333	ENSRBIG00000032535	DDX54	93	84.970	Rhinopithecus_bieti
ENSCAPG00000001482	DDX54	99	76.755	ENSRROG00000029557	DDX54	93	80.387	Rhinopithecus_roxellana
ENSCAPG00000001482	DDX54	84	37.216	YDL031W	-	78	36.632	Saccharomyces_cerevisiae
ENSCAPG00000001482	DDX54	99	82.095	ENSSBOG00000028194	DDX54	93	85.732	Saimiri_boliviensis_boliviensis
ENSCAPG00000001482	DDX54	95	72.215	ENSSHAG00000015646	DDX54	99	72.583	Sarcophilus_harrisii
ENSCAPG00000001482	DDX54	99	60.267	ENSSFOG00015014981	ddx54	96	62.409	Scleropages_formosus
ENSCAPG00000001482	DDX54	94	58.396	ENSSMAG00000003210	ddx54	95	59.712	Scophthalmus_maximus
ENSCAPG00000001482	DDX54	94	59.227	ENSSDUG00000004474	ddx54	95	60.595	Seriola_dumerili
ENSCAPG00000001482	DDX54	94	59.148	ENSSLDG00000010380	ddx54	95	60.072	Seriola_lalandi_dorsalis
ENSCAPG00000001482	DDX54	95	69.753	ENSSPUG00000014141	DDX54	93	69.098	Sphenodon_punctatus
ENSCAPG00000001482	DDX54	94	57.908	ENSSPAG00000022918	ddx54	97	60.172	Stegastes_partitus
ENSCAPG00000001482	DDX54	99	83.171	ENSSSCG00000009876	DDX54	93	87.073	Sus_scrofa
ENSCAPG00000001482	DDX54	97	65.721	ENSTGUG00000009126	DDX54	100	68.991	Taeniopygia_guttata
ENSCAPG00000001482	DDX54	99	57.605	ENSTRUG00000014939	ddx54	96	60.650	Takifugu_rubripes
ENSCAPG00000001482	DDX54	99	59.394	ENSTNIG00000009037	ddx54	95	61.158	Tetraodon_nigroviridis
ENSCAPG00000001482	DDX54	81	92.701	ENSTBEG00000003783	DDX54	78	92.701	Tupaia_belangeri
ENSCAPG00000001482	DDX54	99	78.883	ENSTTRG00000016678	DDX54	93	82.503	Tursiops_truncatus
ENSCAPG00000001482	DDX54	95	86.414	ENSUAMG00000028387	DDX54	100	83.127	Ursus_americanus
ENSCAPG00000001482	DDX54	85	93.548	ENSUMAG00000010245	DDX54	96	92.308	Ursus_maritimus
ENSCAPG00000001482	DDX54	99	82.763	ENSVVUG00000010212	DDX54	93	86.308	Vulpes_vulpes
ENSCAPG00000001482	DDX54	95	62.077	ENSXETG00000016410	ddx54	96	63.415	Xenopus_tropicalis
ENSCAPG00000001482	DDX54	99	58.924	ENSXCOG00000002909	ddx54	96	61.050	Xiphophorus_couchianus
ENSCAPG00000001482	DDX54	99	59.052	ENSXMAG00000005312	ddx54	96	61.220	Xiphophorus_maculatus