EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAPG00000002269 (Gene tree)
Gene ID: -
Gene Symbol: RAVER1
Alias: -
Full Name: ribonucleoprotein%2C PTB binding 1
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Minus strand
Length: 11729 bases
Position: chrAVPZ01000298.1:195187-206915
Accession: 30296
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000001267	RRM_1	PF00076.22	5.6e-26	1	2
ENSCAPP00000001267	RRM_1	PF00076.22	5.6e-26	2	2
ENSCAPP00000001266	RRM_1	PF00076.22	9.6e-26	1	2
ENSCAPP00000001266	RRM_1	PF00076.22	9.6e-26	2	2
ENSCAPP00000001261	RRM_1	PF00076.22	1.2e-25	1	2
ENSCAPP00000001261	RRM_1	PF00076.22	1.2e-25	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000002617	RAVER1-203	1788	-	ENSCAPP00000001267	595 (aa)	-	-
ENSCAPT00000002610	RAVER1-202	2004	-	ENSCAPP00000001266	667 (aa)	-	-
ENSCAPT00000002601	RAVER1-201	2157	-	ENSCAPP00000001261	718 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000002269's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000002269's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAPG00000002269	RAVER1	56	54.518	ENSCAPG00000013527	RAVER2	93	54.217

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000002269	RAVER1	100	87.874	ENSG00000161847	RAVER1	90	88.473	Homo_sapiens
ENSCAPG00000002269	RAVER1	79	59.508	ENSAPOG00000017267	raver1	62	76.596	Acanthochromis_polyacanthus
ENSCAPG00000002269	RAVER1	100	89.371	ENSAMEG00000011738	RAVER1	88	88.772	Ailuropoda_melanoleuca
ENSCAPG00000002269	RAVER1	79	58.772	ENSAOCG00000005128	raver1	65	76.596	Amphiprion_ocellaris
ENSCAPG00000002269	RAVER1	75	75.439	ENSAPEG00000010854	raver1	75	78.846	Amphiprion_percula
ENSCAPG00000002269	RAVER1	100	50.957	ENSATEG00000021004	raver1	86	49.356	Anabas_testudineus
ENSCAPG00000002269	RAVER1	71	86.207	ENSACAG00000008386	-	75	86.667	Anolis_carolinensis
ENSCAPG00000002269	RAVER1	100	86.078	ENSANAG00000028226	RAVER1	88	87.275	Aotus_nancymaae
ENSCAPG00000002269	RAVER1	74	85.417	ENSACLG00000018492	raver1	76	85.417	Astatotilapia_calliptera
ENSCAPG00000002269	RAVER1	77	78.333	ENSAMXG00000005132	raver1	73	84.906	Astyanax_mexicanus
ENSCAPG00000002269	RAVER1	100	93.578	ENSBTAG00000015721	RAVER1	86	94.144	Bos_taurus
ENSCAPG00000002269	RAVER1	100	85.778	ENSCJAG00000005671	RAVER1	97	78.003	Callithrix_jacchus
ENSCAPG00000002269	RAVER1	100	86.357	ENSCAFG00000017861	RAVER1	74	82.013	Canis_familiaris
ENSCAPG00000002269	RAVER1	100	86.357	ENSCAFG00020024449	RAVER1	76	82.013	Canis_lupus_dingo
ENSCAPG00000002269	RAVER1	100	85.778	ENSCHIG00000006718	RAVER1	99	79.242	Capra_hircus
ENSCAPG00000002269	RAVER1	91	84.843	ENSTSYG00000027107	RAVER1	99	84.843	Carlito_syrichta
ENSCAPG00000002269	RAVER1	100	96.552	ENSCPOG00000001008	RAVER1	90	96.552	Cavia_porcellus
ENSCAPG00000002269	RAVER1	100	87.275	ENSCCAG00000031723	RAVER1	88	88.024	Cebus_capucinus
ENSCAPG00000002269	RAVER1	100	88.623	ENSCATG00000043863	RAVER1	88	89.222	Cercocebus_atys
ENSCAPG00000002269	RAVER1	100	90.882	ENSCLAG00000009336	RAVER1	90	90.135	Chinchilla_lanigera
ENSCAPG00000002269	RAVER1	100	88.772	ENSCSAG00000007317	RAVER1	75	89.371	Chlorocebus_sabaeus
ENSCAPG00000002269	RAVER1	93	69.789	ENSCPBG00000005349	-	63	89.655	Chrysemys_picta_bellii
ENSCAPG00000002269	RAVER1	100	88.922	ENSCANG00000008337	RAVER1	88	89.521	Colobus_angolensis_palliatus
ENSCAPG00000002269	RAVER1	100	88.640	ENSCGRG00001013260	-	90	88.042	Cricetulus_griseus_chok1gshd
ENSCAPG00000002269	RAVER1	100	88.640	ENSCGRG00000015138	-	90	88.042	Cricetulus_griseus_crigri
ENSCAPG00000002269	RAVER1	73	78.846	ENSCSEG00000021092	raver1	70	78.846	Cynoglossus_semilaevis
ENSCAPG00000002269	RAVER1	100	50.659	ENSCVAG00000013971	raver1	77	59.300	Cyprinodon_variegatus
ENSCAPG00000002269	RAVER1	79	60.497	ENSDARG00000052617	raver1	79	54.737	Danio_rerio
ENSCAPG00000002269	RAVER1	63	91.892	ENSDNOG00000035742	-	62	91.935	Dasypus_novemcinctus
ENSCAPG00000002269	RAVER1	100	79.825	ENSDORG00000010106	-	99	72.131	Dipodomys_ordii
ENSCAPG00000002269	RAVER1	90	69.759	ENSETEG00000008201	-	84	93.296	Echinops_telfairi
ENSCAPG00000002269	RAVER1	97	74.957	ENSEASG00005010544	-	89	82.955	Equus_asinus_asinus
ENSCAPG00000002269	RAVER1	100	89.820	ENSECAG00000024966	RAVER1	97	79.757	Equus_caballus
ENSCAPG00000002269	RAVER1	100	51.714	ENSELUG00000023287	raver1	86	52.430	Esox_lucius
ENSCAPG00000002269	RAVER1	100	88.772	ENSFCAG00000009435	RAVER1	87	92.727	Felis_catus
ENSCAPG00000002269	RAVER1	100	88.939	ENSFDAG00000015113	RAVER1	99	80.217	Fukomys_damarensis
ENSCAPG00000002269	RAVER1	81	59.649	ENSGMOG00000003649	raver1	76	59.130	Gadus_morhua
ENSCAPG00000002269	RAVER1	100	50.585	ENSGAFG00000015944	raver1	67	78.846	Gambusia_affinis
ENSCAPG00000002269	RAVER1	59	70.764	ENSGACG00000013818	raver1	75	55.748	Gasterosteus_aculeatus
ENSCAPG00000002269	RAVER1	100	61.080	ENSGAGG00000011748	-	83	78.095	Gopherus_agassizii
ENSCAPG00000002269	RAVER1	100	87.575	ENSGGOG00000006015	RAVER1	88	88.174	Gorilla_gorilla
ENSCAPG00000002269	RAVER1	75	82.353	ENSHBUG00000021210	raver1	76	82.353	Haplochromis_burtoni
ENSCAPG00000002269	RAVER1	100	89.238	ENSHGLG00000015460	RAVER1	90	88.939	Heterocephalus_glaber_female
ENSCAPG00000002269	RAVER1	100	89.238	ENSHGLG00100000812	RAVER1	90	88.939	Heterocephalus_glaber_male
ENSCAPG00000002269	RAVER1	79	60.494	ENSHCOG00000000449	raver1	84	49.407	Hippocampus_comes
ENSCAPG00000002269	RAVER1	98	50.208	ENSIPUG00000013153	raver1	76	87.755	Ictalurus_punctatus
ENSCAPG00000002269	RAVER1	100	89.387	ENSSTOG00000003241	RAVER1	90	88.341	Ictidomys_tridecemlineatus
ENSCAPG00000002269	RAVER1	100	87.779	ENSJJAG00000018219	-	90	86.736	Jaculus_jaculus
ENSCAPG00000002269	RAVER1	100	50.808	ENSKMAG00000017355	raver1	73	59.020	Kryptolebias_marmoratus
ENSCAPG00000002269	RAVER1	61	68.144	ENSLBEG00000008268	raver1	63	58.531	Labrus_bergylta
ENSCAPG00000002269	RAVER1	100	58.849	ENSLACG00000005809	-	89	70.248	Latimeria_chalumnae
ENSCAPG00000002269	RAVER1	100	56.143	ENSLOCG00000007500	raver1	87	54.728	Lepisosteus_oculatus
ENSCAPG00000002269	RAVER1	100	87.294	ENSLAFG00000003664	-	91	93.750	Loxodonta_africana
ENSCAPG00000002269	RAVER1	100	88.473	ENSMFAG00000037977	RAVER1	88	89.072	Macaca_fascicularis
ENSCAPG00000002269	RAVER1	100	88.623	ENSMMUG00000014897	RAVER1	90	88.889	Macaca_mulatta
ENSCAPG00000002269	RAVER1	100	88.623	ENSMNEG00000028390	RAVER1	88	89.222	Macaca_nemestrina
ENSCAPG00000002269	RAVER1	100	88.623	ENSMLEG00000041959	RAVER1	88	89.222	Mandrillus_leucophaeus
ENSCAPG00000002269	RAVER1	75	77.358	ENSMAMG00000012059	raver1	71	77.358	Mastacembelus_armatus
ENSCAPG00000002269	RAVER1	74	85.417	ENSMZEG00005019002	raver1	76	85.417	Maylandia_zebra
ENSCAPG00000002269	RAVER1	100	88.077	ENSMAUG00000017948	-	90	86.885	Mesocricetus_auratus
ENSCAPG00000002269	RAVER1	99	85.886	ENSMICG00000010326	RAVER1	90	86.486	Microcebus_murinus
ENSCAPG00000002269	RAVER1	100	88.789	ENSMOCG00000015553	-	90	88.042	Microtus_ochrogaster
ENSCAPG00000002269	RAVER1	100	50.592	ENSMMOG00000012093	raver1	68	85.417	Mola_mola
ENSCAPG00000002269	RAVER1	96	74.308	ENSMODG00000005584	-	79	73.960	Monodelphis_domestica
ENSCAPG00000002269	RAVER1	93	48.763	ENSMALG00000016569	raver1	75	56.438	Monopterus_albus
ENSCAPG00000002269	RAVER1	100	86.815	MGP_CAROLIEiJ_G0031860	-	90	85.481	Mus_caroli
ENSCAPG00000002269	RAVER1	100	86.815	ENSMUSG00000010205	Raver1	90	86.370	Mus_musculus
ENSCAPG00000002269	RAVER1	100	85.272	MGP_PahariEiJ_G0014726	-	90	84.831	Mus_pahari
ENSCAPG00000002269	RAVER1	100	86.667	MGP_SPRETEiJ_G0032984	-	90	86.222	Mus_spretus
ENSCAPG00000002269	RAVER1	100	88.323	ENSMPUG00000006712	RAVER1	88	87.725	Mustela_putorius_furo
ENSCAPG00000002269	RAVER1	100	85.757	ENSMLUG00000012328	RAVER1	69	89.372	Myotis_lucifugus
ENSCAPG00000002269	RAVER1	100	86.826	ENSNGAG00000001260	-	99	77.673	Nannospalax_galili
ENSCAPG00000002269	RAVER1	79	61.250	ENSNBRG00000010139	raver1	67	82.692	Neolamprologus_brichardi
ENSCAPG00000002269	RAVER1	100	87.874	ENSNLEG00000012181	RAVER1	88	88.473	Nomascus_leucogenys
ENSCAPG00000002269	RAVER1	100	74.294	ENSMEUG00000003281	-	100	72.917	Notamacropus_eugenii
ENSCAPG00000002269	RAVER1	100	90.419	ENSODEG00000016260	RAVER1	99	82.730	Octodon_degus
ENSCAPG00000002269	RAVER1	79	60.000	ENSONIG00000001559	raver1	79	82.353	Oreochromis_niloticus
ENSCAPG00000002269	RAVER1	100	78.261	ENSOCUG00000020918	RAVER1	99	71.622	Oryctolagus_cuniculus
ENSCAPG00000002269	RAVER1	67	69.318	ENSORLG00000005458	raver1	67	62.716	Oryzias_latipes
ENSCAPG00000002269	RAVER1	67	69.318	ENSORLG00020004392	raver1	71	62.469	Oryzias_latipes_hni
ENSCAPG00000002269	RAVER1	67	69.034	ENSORLG00015017222	raver1	67	62.222	Oryzias_latipes_hsok
ENSCAPG00000002269	RAVER1	62	81.633	ENSOMEG00000023956	raver1	67	81.633	Oryzias_melastigma
ENSCAPG00000002269	RAVER1	100	88.606	ENSOGAG00000011071	RAVER1	88	88.606	Otolemur_garnettii
ENSCAPG00000002269	RAVER1	100	83.136	ENSOARG00000015886	RAVER1	97	74.899	Ovis_aries
ENSCAPG00000002269	RAVER1	100	87.874	ENSPPAG00000002611	RAVER1	88	88.473	Pan_paniscus
ENSCAPG00000002269	RAVER1	100	89.222	ENSPPRG00000009912	RAVER1	87	94.545	Panthera_pardus
ENSCAPG00000002269	RAVER1	100	87.874	ENSPTRG00000010466	RAVER1	88	88.473	Pan_troglodytes
ENSCAPG00000002269	RAVER1	100	88.473	ENSPANG00000004122	RAVER1	88	89.072	Papio_anubis
ENSCAPG00000002269	RAVER1	100	88.209	ENSPEMG00000016411	-	90	88.060	Peromyscus_maniculatus_bairdii
ENSCAPG00000002269	RAVER1	100	75.483	ENSPCIG00000018695	-	88	83.871	Phascolarctos_cinereus
ENSCAPG00000002269	RAVER1	100	49.282	ENSPFOG00000007016	raver1	61	65.940	Poecilia_formosa
ENSCAPG00000002269	RAVER1	53	80.000	ENSPLAG00000020793	raver1	50	68.451	Poecilia_latipinna
ENSCAPG00000002269	RAVER1	100	51.170	ENSPMEG00000011220	raver1	61	68.362	Poecilia_mexicana
ENSCAPG00000002269	RAVER1	72	88.372	ENSPREG00000006864	raver1	70	88.372	Poecilia_reticulata
ENSCAPG00000002269	RAVER1	100	86.807	ENSPPYG00000010514	RAVER1	75	87.874	Pongo_abelii
ENSCAPG00000002269	RAVER1	100	88.806	ENSPCOG00000026605	RAVER1	88	88.358	Propithecus_coquereli
ENSCAPG00000002269	RAVER1	100	88.906	ENSPVAG00000003689	RAVER1	90	88.906	Pteropus_vampyrus
ENSCAPG00000002269	RAVER1	65	82.353	ENSPNYG00000013284	raver1	66	82.353	Pundamilia_nyererei
ENSCAPG00000002269	RAVER1	100	51.836	ENSPNAG00000015476	raver1	92	49.322	Pygocentrus_nattereri
ENSCAPG00000002269	RAVER1	100	86.815	ENSRNOG00000020710	Raver1	90	85.926	Rattus_norvegicus
ENSCAPG00000002269	RAVER1	100	88.024	ENSRBIG00000034702	RAVER1	88	89.072	Rhinopithecus_bieti
ENSCAPG00000002269	RAVER1	100	85.778	ENSRROG00000031186	RAVER1	88	86.228	Rhinopithecus_roxellana
ENSCAPG00000002269	RAVER1	100	84.281	ENSSBOG00000023423	RAVER1	88	84.880	Saimiri_boliviensis_boliviensis
ENSCAPG00000002269	RAVER1	100	74.742	ENSSHAG00000008181	-	90	74.742	Sarcophilus_harrisii
ENSCAPG00000002269	RAVER1	74	83.673	ENSSMAG00000004546	raver1	68	83.673	Scophthalmus_maximus
ENSCAPG00000002269	RAVER1	79	60.938	ENSSDUG00000021063	raver1	73	82.000	Seriola_dumerili
ENSCAPG00000002269	RAVER1	79	60.714	ENSSLDG00000014505	raver1	67	82.000	Seriola_lalandi_dorsalis
ENSCAPG00000002269	RAVER1	79	60.714	ENSSPAG00000000688	raver1	86	50.570	Stegastes_partitus
ENSCAPG00000002269	RAVER1	100	88.456	ENSSSCG00000013650	-	88	88.306	Sus_scrofa
ENSCAPG00000002269	RAVER1	93	49.493	ENSTRUG00000025641	raver1	73	57.871	Takifugu_rubripes
ENSCAPG00000002269	RAVER1	100	89.505	ENSTTRG00000009552	RAVER1	90	89.505	Tursiops_truncatus
ENSCAPG00000002269	RAVER1	100	89.820	ENSUAMG00000020385	RAVER1	88	89.222	Ursus_americanus
ENSCAPG00000002269	RAVER1	100	86.357	ENSVVUG00000028976	RAVER1	74	81.799	Vulpes_vulpes
ENSCAPG00000002269	RAVER1	100	56.515	ENSXETG00000011622	raver1	91	53.945	Xenopus_tropicalis
ENSCAPG00000002269	RAVER1	100	50.363	ENSXCOG00000016368	raver1	60	67.714	Xiphophorus_couchianus
ENSCAPG00000002269	RAVER1	100	50.363	ENSXMAG00000000217	raver1	60	67.714	Xiphophorus_maculatus