EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAPG00000002354 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Minus strand
Length: 1414 bases
Position: chrAVPZ01000667.1:20160931-20162344
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000001278	RRM_1	PF00076.22	2.2e-22	1	2
ENSCAPP00000001278	RRM_1	PF00076.22	2.2e-22	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000002647	-	1248	-	ENSCAPP00000001278	415 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000002354's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000002354's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAPG00000002354	-	69	62.963	ENSCAPG00000006522	-	83	64.198
ENSCAPG00000002354	-	97	53.125	ENSCAPG00000002723	-	99	53.229
ENSCAPG00000002354	-	97	70.947	ENSCAPG00000011616	-	99	72.211

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000002354	-	97	72.222	ENSG00000147140	NONO	100	82.609	Homo_sapiens
ENSCAPG00000002354	-	79	50.627	ENSAPOG00000023320	nono	90	50.627	Acanthochromis_polyacanthus
ENSCAPG00000002354	-	97	73.019	ENSAMEG00000016057	NONO	99	73.876	Ailuropoda_melanoleuca
ENSCAPG00000002354	-	75	54.011	ENSACIG00000019987	nono	84	54.011	Amphilophus_citrinellus
ENSCAPG00000002354	-	79	50.627	ENSAOCG00000018863	nono	90	50.627	Amphiprion_ocellaris
ENSCAPG00000002354	-	60	56.897	ENSAPEG00000011383	nono	88	52.778	Amphiprion_percula
ENSCAPG00000002354	-	85	62.768	ENSAPLG00000002642	NONO	97	63.723	Anas_platyrhynchos
ENSCAPG00000002354	-	97	63.248	ENSACAG00000015026	NONO	99	64.744	Anolis_carolinensis
ENSCAPG00000002354	-	97	55.983	ENSANAG00000027089	-	99	58.836	Aotus_nancymaae
ENSCAPG00000002354	-	97	72.222	ENSANAG00000033266	-	99	73.077	Aotus_nancymaae
ENSCAPG00000002354	-	97	54.566	ENSANAG00000035751	-	98	58.599	Aotus_nancymaae
ENSCAPG00000002354	-	62	57.895	ENSACLG00000012045	nono	89	57.270	Astatotilapia_calliptera
ENSCAPG00000002354	-	71	54.360	ENSAMXG00000033933	nono	90	49.645	Astyanax_mexicanus
ENSCAPG00000002354	-	97	73.165	ENSBTAG00000012152	NONO	99	74.083	Bos_taurus
ENSCAPG00000002354	-	97	72.222	ENSCJAG00000036744	NONO	99	73.077	Callithrix_jacchus
ENSCAPG00000002354	-	97	71.949	ENSCAFG00000003207	-	99	72.805	Canis_familiaris
ENSCAPG00000002354	-	97	61.187	ENSCAFG00000013766	-	99	63.242	Canis_familiaris
ENSCAPG00000002354	-	97	73.019	ENSCAFG00000017071	NONO	99	73.876	Canis_familiaris
ENSCAPG00000002354	-	88	65.714	ENSCAFG00000030809	-	99	66.905	Canis_familiaris
ENSCAPG00000002354	-	97	72.845	ENSCAFG00020020298	-	99	73.707	Canis_lupus_dingo
ENSCAPG00000002354	-	97	72.805	ENSCHIG00000000365	-	99	73.662	Capra_hircus
ENSCAPG00000002354	-	73	66.575	ENSCHIG00000009602	-	88	66.575	Capra_hircus
ENSCAPG00000002354	-	97	71.613	ENSTSYG00000007423	-	99	72.473	Carlito_syrichta
ENSCAPG00000002354	-	97	69.556	ENSTSYG00000036306	-	99	71.556	Carlito_syrichta
ENSCAPG00000002354	-	97	69.507	ENSTSYG00000034207	-	99	69.507	Carlito_syrichta
ENSCAPG00000002354	-	97	71.399	ENSCPOG00000010263	-	99	72.234	Cavia_porcellus
ENSCAPG00000002354	-	97	72.363	ENSCPOG00000023605	-	99	72.363	Cavia_porcellus
ENSCAPG00000002354	-	97	96.314	ENSCPOG00000026604	-	99	96.314	Cavia_porcellus
ENSCAPG00000002354	-	79	67.368	ENSCPOG00000036719	-	93	71.582	Cavia_porcellus
ENSCAPG00000002354	-	97	69.935	ENSCPOG00000038668	-	99	70.652	Cavia_porcellus
ENSCAPG00000002354	-	97	65.293	ENSCATG00000039509	NONO	99	66.161	Cercocebus_atys
ENSCAPG00000002354	-	97	71.975	ENSCLAG00000003642	NONO	99	72.824	Chinchilla_lanigera
ENSCAPG00000002354	-	97	61.506	ENSCPBG00000016659	NONO	99	62.134	Chrysemys_picta_bellii
ENSCAPG00000002354	-	97	72.767	ENSCANG00000025310	NONO	99	73.638	Colobus_angolensis_palliatus
ENSCAPG00000002354	-	97	71.855	ENSCGRG00001000065	Nono	99	72.708	Cricetulus_griseus_chok1gshd
ENSCAPG00000002354	-	84	71.084	ENSCGRG00000004508	Nono	99	72.048	Cricetulus_griseus_crigri
ENSCAPG00000002354	-	69	55.848	ENSCSEG00000008189	NONO	92	49.524	Cynoglossus_semilaevis
ENSCAPG00000002354	-	79	52.910	ENSCSEG00000010708	nono	88	49.296	Cynoglossus_semilaevis
ENSCAPG00000002354	-	74	54.521	ENSCVAG00000003978	nono	88	52.577	Cyprinodon_variegatus
ENSCAPG00000002354	-	62	57.377	ENSDARG00000020482	nono	100	52.672	Danio_rerio
ENSCAPG00000002354	-	50	81.429	ENSDNOG00000003267	-	86	81.905	Dasypus_novemcinctus
ENSCAPG00000002354	-	72	58.333	ENSDNOG00000031430	-	100	58.333	Dasypus_novemcinctus
ENSCAPG00000002354	-	62	55.479	ENSDNOG00000032215	-	99	55.556	Dasypus_novemcinctus
ENSCAPG00000002354	-	97	71.092	ENSDORG00000009294	Nono	99	71.949	Dipodomys_ordii
ENSCAPG00000002354	-	81	69.602	ENSETEG00000013823	NONO	85	70.739	Echinops_telfairi
ENSCAPG00000002354	-	97	73.019	ENSECAG00000008502	NONO	99	73.876	Equus_caballus
ENSCAPG00000002354	-	97	70.878	ENSEEUG00000014404	NONO	99	71.734	Erinaceus_europaeus
ENSCAPG00000002354	-	87	49.425	ENSELUG00000001083	nono	95	49.195	Esox_lucius
ENSCAPG00000002354	-	97	73.019	ENSFCAG00000043511	-	99	73.876	Felis_catus
ENSCAPG00000002354	-	97	61.024	ENSFALG00000011765	NONO	99	60.134	Ficedula_albicollis
ENSCAPG00000002354	-	97	65.402	ENSFDAG00000006143	-	99	67.654	Fukomys_damarensis
ENSCAPG00000002354	-	97	73.019	ENSFDAG00000012809	-	99	73.876	Fukomys_damarensis
ENSCAPG00000002354	-	69	56.140	ENSFHEG00000009714	nono	89	53.488	Fundulus_heteroclitus
ENSCAPG00000002354	-	97	60.669	ENSGALG00000005507	NONO	99	61.506	Gallus_gallus
ENSCAPG00000002354	-	72	55.096	ENSGAFG00000011460	nono	92	52.812	Gambusia_affinis
ENSCAPG00000002354	-	75	51.613	ENSGACG00000011824	nono	93	50.239	Gasterosteus_aculeatus
ENSCAPG00000002354	-	97	62.900	ENSGAGG00000025400	-	90	63.539	Gopherus_agassizii
ENSCAPG00000002354	-	97	64.069	ENSGGOG00000036327	-	99	65.368	Gorilla_gorilla
ENSCAPG00000002354	-	88	71.562	ENSGGOG00000006194	NONO	91	79.137	Gorilla_gorilla
ENSCAPG00000002354	-	75	54.278	ENSHBUG00000010741	nono	84	54.278	Haplochromis_burtoni
ENSCAPG00000002354	-	97	72.650	ENSHGLG00000005550	NONO	99	73.504	Heterocephalus_glaber_female
ENSCAPG00000002354	-	97	72.650	ENSHGLG00100013511	NONO	99	73.504	Heterocephalus_glaber_male
ENSCAPG00000002354	-	78	53.385	ENSHCOG00000016441	nono	91	53.385	Hippocampus_comes
ENSCAPG00000002354	-	65	56.135	ENSIPUG00000018271	nono	91	50.957	Ictalurus_punctatus
ENSCAPG00000002354	-	97	73.019	ENSSTOG00000015869	NONO	99	73.876	Ictidomys_tridecemlineatus
ENSCAPG00000002354	-	97	59.389	ENSJJAG00000001971	-	99	59.735	Jaculus_jaculus
ENSCAPG00000002354	-	97	72.163	ENSJJAG00000017151	-	99	73.019	Jaculus_jaculus
ENSCAPG00000002354	-	89	46.729	ENSKMAG00000002798	nono	91	48.810	Kryptolebias_marmoratus
ENSCAPG00000002354	-	80	51.399	ENSLBEG00000022623	nono	86	53.226	Labrus_bergylta
ENSCAPG00000002354	-	79	58.684	ENSLACG00000000598	NONO	90	58.684	Latimeria_chalumnae
ENSCAPG00000002354	-	96	50.218	ENSLOCG00000014739	nono	98	51.188	Lepisosteus_oculatus
ENSCAPG00000002354	-	97	72.281	ENSLAFG00000013422	NONO	99	72.708	Loxodonta_africana
ENSCAPG00000002354	-	97	72.222	ENSMFAG00000041557	NONO	99	73.077	Macaca_fascicularis
ENSCAPG00000002354	-	76	71.240	ENSMMUG00000020481	NONO	99	72.296	Macaca_mulatta
ENSCAPG00000002354	-	97	72.222	ENSMNEG00000009698	NONO	99	73.077	Macaca_nemestrina
ENSCAPG00000002354	-	97	72.222	ENSMLEG00000042452	NONO	99	73.077	Mandrillus_leucophaeus
ENSCAPG00000002354	-	66	55.108	ENSMAMG00000007314	nono	87	52.344	Mastacembelus_armatus
ENSCAPG00000002354	-	62	57.895	ENSMZEG00005010199	nono	89	57.270	Maylandia_zebra
ENSCAPG00000002354	-	85	63.007	ENSMGAG00000008869	NONO	97	63.962	Meleagris_gallopavo
ENSCAPG00000002354	-	97	71.550	ENSMAUG00000016243	Nono	99	71.762	Mesocricetus_auratus
ENSCAPG00000002354	-	97	72.163	ENSMICG00000000232	NONO	99	73.019	Microcebus_murinus
ENSCAPG00000002354	-	88	71.065	ENSMOCG00000005532	-	94	72.196	Microtus_ochrogaster
ENSCAPG00000002354	-	97	63.020	ENSMOCG00000021293	-	99	64.333	Microtus_ochrogaster
ENSCAPG00000002354	-	97	57.543	ENSMOCG00000020099	-	94	59.267	Microtus_ochrogaster
ENSCAPG00000002354	-	75	53.619	ENSMMOG00000015503	nono	85	49.645	Mola_mola
ENSCAPG00000002354	-	88	66.279	ENSMODG00000004445	NONO	98	67.056	Monodelphis_domestica
ENSCAPG00000002354	-	74	53.495	ENSMALG00000001310	nono	89	53.495	Monopterus_albus
ENSCAPG00000002354	-	97	71.702	ENSMUSG00000031311	Nono	100	74.490	Mus_musculus
ENSCAPG00000002354	-	97	71.398	MGP_PahariEiJ_G0031826	Nono	99	71.610	Mus_pahari
ENSCAPG00000002354	-	97	73.019	ENSMPUG00000004937	NONO	99	73.876	Mustela_putorius_furo
ENSCAPG00000002354	-	97	72.591	ENSMLUG00000002489	NONO	88	73.448	Myotis_lucifugus
ENSCAPG00000002354	-	97	70.878	ENSNGAG00000010857	Nono	99	71.949	Nannospalax_galili
ENSCAPG00000002354	-	75	54.545	ENSNBRG00000017083	nono	84	54.545	Neolamprologus_brichardi
ENSCAPG00000002354	-	97	72.767	ENSNLEG00000001278	NONO	99	73.638	Nomascus_leucogenys
ENSCAPG00000002354	-	97	62.393	ENSMEUG00000004294	NONO	99	62.607	Notamacropus_eugenii
ENSCAPG00000002354	-	57	82.353	ENSOPRG00000001139	-	68	82.353	Ochotona_princeps
ENSCAPG00000002354	-	96	67.742	ENSODEG00000002224	-	99	69.677	Octodon_degus
ENSCAPG00000002354	-	97	54.628	ENSODEG00000011878	-	99	54.897	Octodon_degus
ENSCAPG00000002354	-	94	58.294	ENSODEG00000004982	-	98	59.953	Octodon_degus
ENSCAPG00000002354	-	87	53.140	ENSODEG00000000530	-	88	53.110	Octodon_degus
ENSCAPG00000002354	-	97	69.556	ENSODEG00000002994	-	99	70.444	Octodon_degus
ENSCAPG00000002354	-	75	54.545	ENSONIG00000020497	nono	84	54.545	Oreochromis_niloticus
ENSCAPG00000002354	-	97	67.373	ENSOCUG00000021848	-	89	71.663	Oryctolagus_cuniculus
ENSCAPG00000002354	-	97	51.708	ENSOCUG00000024801	-	97	51.481	Oryctolagus_cuniculus
ENSCAPG00000002354	-	67	53.354	ENSORLG00000012801	nono	89	50.636	Oryzias_latipes
ENSCAPG00000002354	-	60	57.241	ENSORLG00020003761	nono	79	53.561	Oryzias_latipes_hni
ENSCAPG00000002354	-	67	53.354	ENSORLG00015018033	nono	89	50.891	Oryzias_latipes_hsok
ENSCAPG00000002354	-	67	53.354	ENSOMEG00000012702	nono	87	51.554	Oryzias_melastigma
ENSCAPG00000002354	-	97	72.650	ENSOGAG00000004834	NONO	99	73.504	Otolemur_garnettii
ENSCAPG00000002354	-	97	73.019	ENSOARG00000016966	NONO	99	73.876	Ovis_aries
ENSCAPG00000002354	-	97	63.812	ENSPPAG00000041394	-	99	65.525	Pan_paniscus
ENSCAPG00000002354	-	97	72.451	ENSPPAG00000032487	NONO	99	73.319	Pan_paniscus
ENSCAPG00000002354	-	97	73.019	ENSPPRG00000024537	-	99	73.876	Panthera_pardus
ENSCAPG00000002354	-	97	72.805	ENSPTIG00000016068	-	99	73.662	Panthera_tigris_altaica
ENSCAPG00000002354	-	97	72.451	ENSPTRG00000022010	NONO	99	73.319	Pan_troglodytes
ENSCAPG00000002354	-	97	63.597	ENSPTRG00000051228	-	99	65.310	Pan_troglodytes
ENSCAPG00000002354	-	97	72.222	ENSPANG00000013979	NONO	99	73.077	Papio_anubis
ENSCAPG00000002354	-	97	55.180	ENSPANG00000035017	-	99	56.410	Papio_anubis
ENSCAPG00000002354	-	87	51.756	ENSPKIG00000014500	nono	99	49.679	Paramormyrops_kingsleyae
ENSCAPG00000002354	-	85	50.370	ENSPKIG00000019475	-	92	59.341	Paramormyrops_kingsleyae
ENSCAPG00000002354	-	97	63.113	ENSPSIG00000010678	NONO	99	63.113	Pelodiscus_sinensis
ENSCAPG00000002354	-	81	48.649	ENSPMGG00000023030	nono	87	51.823	Periophthalmus_magnuspinnatus
ENSCAPG00000002354	-	97	71.642	ENSPEMG00000011150	Nono	99	72.495	Peromyscus_maniculatus_bairdii
ENSCAPG00000002354	-	97	66.167	ENSPCIG00000026515	NONO	99	67.024	Phascolarctos_cinereus
ENSCAPG00000002354	-	72	53.779	ENSPFOG00000016436	nono	92	50.370	Poecilia_formosa
ENSCAPG00000002354	-	72	53.994	ENSPLAG00000017492	nono	91	50.943	Poecilia_latipinna
ENSCAPG00000002354	-	81	51.750	ENSPMEG00000021530	nono	85	54.133	Poecilia_mexicana
ENSCAPG00000002354	-	79	53.421	ENSPREG00000010014	nono	91	51.179	Poecilia_reticulata
ENSCAPG00000002354	-	97	71.795	ENSPPYG00000020451	NONO	99	72.650	Pongo_abelii
ENSCAPG00000002354	-	97	71.398	ENSPCAG00000002541	NONO	99	72.246	Procavia_capensis
ENSCAPG00000002354	-	97	73.019	ENSPCOG00000008197	NONO	97	77.551	Propithecus_coquereli
ENSCAPG00000002354	-	97	72.591	ENSPVAG00000016503	NONO	99	73.448	Pteropus_vampyrus
ENSCAPG00000002354	-	71	53.779	ENSPNAG00000008232	nono	65	57.187	Pygocentrus_nattereri
ENSCAPG00000002354	-	97	71.247	ENSRNOG00000003689	Nono	99	71.459	Rattus_norvegicus
ENSCAPG00000002354	-	72	70.248	ENSRBIG00000037966	NONO	99	71.350	Rhinopithecus_bieti
ENSCAPG00000002354	-	97	72.767	ENSRROG00000043203	NONO	99	73.638	Rhinopithecus_roxellana
ENSCAPG00000002354	-	97	60.754	ENSSBOG00000018932	-	99	61.419	Saimiri_boliviensis_boliviensis
ENSCAPG00000002354	-	97	72.009	ENSSBOG00000032772	-	99	72.863	Saimiri_boliviensis_boliviensis
ENSCAPG00000002354	-	97	68.803	ENSSBOG00000027683	-	99	69.658	Saimiri_boliviensis_boliviensis
ENSCAPG00000002354	-	97	65.116	ENSSHAG00000010195	NONO	99	65.962	Sarcophilus_harrisii
ENSCAPG00000002354	-	83	48.750	ENSSFOG00015000137	-	89	49.750	Scleropages_formosus
ENSCAPG00000002354	-	87	51.643	ENSSFOG00015008964	nono	91	58.967	Scleropages_formosus
ENSCAPG00000002354	-	87	47.981	ENSSDUG00000021886	nono	87	51.823	Seriola_dumerili
ENSCAPG00000002354	-	87	47.981	ENSSLDG00000012392	nono	87	51.823	Seriola_lalandi_dorsalis
ENSCAPG00000002354	-	97	68.522	ENSSARG00000007959	NONO	99	68.365	Sorex_araneus
ENSCAPG00000002354	-	76	61.680	ENSSPUG00000003116	NONO	99	62.730	Sphenodon_punctatus
ENSCAPG00000002354	-	74	52.419	ENSSPAG00000012663	nono	84	52.419	Stegastes_partitus
ENSCAPG00000002354	-	97	73.019	ENSSSCG00000023245	NONO	99	73.876	Sus_scrofa
ENSCAPG00000002354	-	97	62.340	ENSTGUG00000007048	NONO	99	62.340	Taeniopygia_guttata
ENSCAPG00000002354	-	62	57.895	ENSTRUG00000005554	nono	91	50.235	Takifugu_rubripes
ENSCAPG00000002354	-	97	73.019	ENSTTRG00000009605	NONO	99	73.876	Tursiops_truncatus
ENSCAPG00000002354	-	97	72.845	ENSUAMG00000008220	NONO	91	81.884	Ursus_americanus
ENSCAPG00000002354	-	97	73.019	ENSUMAG00000021550	NONO	99	73.876	Ursus_maritimus
ENSCAPG00000002354	-	97	73.019	ENSVPAG00000002272	NONO	99	73.876	Vicugna_pacos
ENSCAPG00000002354	-	97	71.306	ENSVVUG00000003390	-	99	72.163	Vulpes_vulpes
ENSCAPG00000002354	-	97	56.197	ENSXETG00000020868	nono	99	55.769	Xenopus_tropicalis
ENSCAPG00000002354	-	72	54.821	ENSXCOG00000015587	nono	92	51.651	Xiphophorus_couchianus
ENSCAPG00000002354	-	72	54.821	ENSXMAG00000019883	nono	92	51.651	Xiphophorus_maculatus