EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000002530 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Minus strand
Length: 1661 bases
Position: chrAVPZ01000023.1:26346279-26347939
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000001341	zf-RanBP	PF00641.18	3.1e-07	1	1
ENSCAPP00000001355	zf-RanBP	PF00641.18	3.8e-07	1	1
ENSCAPP00000001341	RRM_1	PF00076.22	5.6e-10	1	1
ENSCAPP00000001355	RRM_1	PF00076.22	6.9e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000002844	-	1338	-	ENSCAPP00000001341	445 (aa)	-	-
ENSCAPT00000002872	-	1458	-	ENSCAPP00000001355	485 (aa)	-	-
ENSCAPT00000002893	-	435	-	ENSCAPP00000001363	144 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000002530's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000002530's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000002530	-	100	85.841	ENSG00000270647	TAF15	100	82.889	Homo_sapiens
ENSCAPG00000002530	-	77	87.532	ENSAMEG00000014860	TAF15	70	85.930	Ailuropoda_melanoleuca
ENSCAPG00000002530	-	77	62.704	ENSAPLG00000006217	TAF15	91	63.279	Anas_platyrhynchos
ENSCAPG00000002530	-	77	87.817	ENSANAG00000020904	TAF15	72	82.957	Aotus_nancymaae
ENSCAPG00000002530	-	100	86.062	ENSCJAG00000014961	TAF15	100	83.111	Callithrix_jacchus
ENSCAPG00000002530	-	77	87.786	ENSCAFG00000018176	TAF15	70	86.181	Canis_familiaris
ENSCAPG00000002530	-	77	87.786	ENSCAFG00020004027	TAF15	71	86.181	Canis_lupus_dingo
ENSCAPG00000002530	-	67	85.000	ENSCHIG00000019985	-	79	82.201	Capra_hircus
ENSCAPG00000002530	-	77	88.295	ENSTSYG00000003930	TAF15	84	72.549	Carlito_syrichta
ENSCAPG00000002530	-	100	99.794	ENSCPOG00000010259	-	100	99.794	Cavia_porcellus
ENSCAPG00000002530	-	100	78.795	ENSCCAG00000036025	TAF15	100	78.251	Cebus_capucinus
ENSCAPG00000002530	-	100	86.283	ENSCATG00000044848	TAF15	100	83.333	Cercocebus_atys
ENSCAPG00000002530	-	74	89.390	ENSCLAG00000008940	TAF15	69	87.696	Chinchilla_lanigera
ENSCAPG00000002530	-	77	88.550	ENSCSAG00000006241	TAF15	67	86.935	Chlorocebus_sabaeus
ENSCAPG00000002530	-	74	83.245	ENSCHOG00000002729	TAF15	61	81.890	Choloepus_hoffmanni
ENSCAPG00000002530	-	76	69.289	ENSCPBG00000027820	TAF15	91	67.494	Chrysemys_picta_bellii
ENSCAPG00000002530	-	66	89.226	ENSCANG00000042639	-	85	86.364	Colobus_angolensis_palliatus
ENSCAPG00000002530	-	100	67.333	ENSCANG00000038846	-	95	89.552	Colobus_angolensis_palliatus
ENSCAPG00000002530	-	77	81.888	ENSCGRG00001012011	Taf15	68	80.353	Cricetulus_griseus_chok1gshd
ENSCAPG00000002530	-	76	88.342	ENSCGRG00000005110	Taf15	55	88.562	Cricetulus_griseus_crigri
ENSCAPG00000002530	-	77	88.550	ENSDNOG00000006956	TAF15	74	86.935	Dasypus_novemcinctus
ENSCAPG00000002530	-	77	79.692	ENSDORG00000014619	Taf15	69	81.218	Dipodomys_ordii
ENSCAPG00000002530	-	70	86.517	ENSETEG00000001337	TAF15	64	84.551	Echinops_telfairi
ENSCAPG00000002530	-	98	84.459	ENSEASG00005011235	TAF15	98	78.049	Equus_asinus_asinus
ENSCAPG00000002530	-	77	89.059	ENSECAG00000000718	TAF15	66	87.437	Equus_caballus
ENSCAPG00000002530	-	99	84.855	ENSFCAG00000018167	TAF15	99	81.432	Felis_catus
ENSCAPG00000002530	-	75	69.767	ENSFALG00000009696	TAF15	90	68.766	Ficedula_albicollis
ENSCAPG00000002530	-	66	92.308	ENSFDAG00000008577	TAF15	72	85.930	Fukomys_damarensis
ENSCAPG00000002530	-	76	63.615	ENSGALG00000002060	TAF15	91	64.055	Gallus_gallus
ENSCAPG00000002530	-	100	85.841	ENSGGOG00000005693	TAF15	100	82.889	Gorilla_gorilla
ENSCAPG00000002530	-	97	62.181	ENSHGLG00000002551	-	99	63.063	Heterocephalus_glaber_female
ENSCAPG00000002530	-	77	88.550	ENSHGLG00000005292	-	55	88.235	Heterocephalus_glaber_female
ENSCAPG00000002530	-	99	62.812	ENSHGLG00100002825	-	99	63.656	Heterocephalus_glaber_male
ENSCAPG00000002530	-	74	88.800	ENSHGLG00100013953	-	70	86.198	Heterocephalus_glaber_male
ENSCAPG00000002530	-	77	89.059	ENSSTOG00000002081	TAF15	70	86.935	Ictidomys_tridecemlineatus
ENSCAPG00000002530	-	76	86.234	ENSJJAG00000010606	Taf15	67	84.615	Jaculus_jaculus
ENSCAPG00000002530	-	74	56.468	ENSLACG00000018479	-	89	50.939	Latimeria_chalumnae
ENSCAPG00000002530	-	77	87.277	ENSLAFG00000018332	TAF15	68	85.678	Loxodonta_africana
ENSCAPG00000002530	-	77	88.325	ENSMFAG00000041941	TAF15	68	86.717	Macaca_fascicularis
ENSCAPG00000002530	-	77	88.325	ENSMMUG00000047780	TAF15	68	86.717	Macaca_mulatta
ENSCAPG00000002530	-	77	85.604	ENSMMUG00000047590	-	62	94.203	Macaca_mulatta
ENSCAPG00000002530	-	100	86.283	ENSMNEG00000044227	TAF15	100	83.333	Macaca_nemestrina
ENSCAPG00000002530	-	100	86.283	ENSMLEG00000028534	TAF15	100	83.333	Mandrillus_leucophaeus
ENSCAPG00000002530	-	62	75.789	ENSMGAG00000003842	TAF15	64	71.818	Meleagris_gallopavo
ENSCAPG00000002530	-	77	87.277	ENSMICG00000017057	TAF15	68	85.678	Microcebus_murinus
ENSCAPG00000002530	-	77	87.563	ENSMOCG00000015121	Taf15	71	85.965	Microtus_ochrogaster
ENSCAPG00000002530	-	77	84.264	ENSMODG00000019123	TAF15	68	83.987	Monodelphis_domestica
ENSCAPG00000002530	-	77	88.041	MGP_CAROLIEiJ_G0016876	Taf15	68	86.432	Mus_caroli
ENSCAPG00000002530	-	66	91.333	ENSMUSG00000020680	Taf15	70	93.833	Mus_musculus
ENSCAPG00000002530	-	66	91.000	MGP_PahariEiJ_G0018007	Taf15	67	93.833	Mus_pahari
ENSCAPG00000002530	-	77	88.295	MGP_SPRETEiJ_G0017720	Taf15	67	93.833	Mus_spretus
ENSCAPG00000002530	-	74	88.710	ENSMPUG00000014948	TAF15	84	88.441	Mustela_putorius_furo
ENSCAPG00000002530	-	77	88.295	ENSMLUG00000002870	TAF15	77	86.683	Myotis_lucifugus
ENSCAPG00000002530	-	97	70.481	ENSNGAG00000019473	-	99	67.483	Nannospalax_galili
ENSCAPG00000002530	-	77	83.206	ENSNGAG00000017633	-	67	78.240	Nannospalax_galili
ENSCAPG00000002530	-	99	86.253	ENSNLEG00000014063	TAF15	100	82.405	Nomascus_leucogenys
ENSCAPG00000002530	-	64	85.057	ENSMEUG00000006009	-	54	85.463	Notamacropus_eugenii
ENSCAPG00000002530	-	95	74.429	ENSODEG00000001772	-	97	73.944	Octodon_degus
ENSCAPG00000002530	-	97	80.046	ENSODEG00000004747	-	98	78.032	Octodon_degus
ENSCAPG00000002530	-	99	87.162	ENSODEG00000012915	-	99	84.009	Octodon_degus
ENSCAPG00000002530	-	76	67.982	ENSOANG00000014273	TAF15	82	68.707	Ornithorhynchus_anatinus
ENSCAPG00000002530	-	77	89.514	ENSOCUG00000002838	TAF15	67	87.879	Oryctolagus_cuniculus
ENSCAPG00000002530	-	77	87.563	ENSOGAG00000011719	TAF15	68	85.427	Otolemur_garnettii
ENSCAPG00000002530	-	77	85.242	ENSOARG00000000081	-	77	83.668	Ovis_aries
ENSCAPG00000002530	-	76	87.661	ENSOARG00000005512	-	87	85.934	Ovis_aries
ENSCAPG00000002530	-	99	86.192	ENSPPAG00000043510	-	100	82.667	Pan_paniscus
ENSCAPG00000002530	-	77	89.059	ENSPPRG00000003286	TAF15	69	87.437	Panthera_pardus
ENSCAPG00000002530	-	99	87.305	ENSPTIG00000016445	TAF15	99	80.313	Panthera_tigris_altaica
ENSCAPG00000002530	-	99	86.192	ENSPTRG00000009026	TAF15	100	82.667	Pan_troglodytes
ENSCAPG00000002530	-	100	86.283	ENSPANG00000022930	TAF15	100	83.333	Papio_anubis
ENSCAPG00000002530	-	76	66.501	ENSPSIG00000014222	TAF15	91	65.693	Pelodiscus_sinensis
ENSCAPG00000002530	-	77	85.459	ENSPEMG00000018715	Taf15	68	83.879	Peromyscus_maniculatus_bairdii
ENSCAPG00000002530	-	77	85.751	ENSPCIG00000003783	TAF15	72	84.422	Phascolarctos_cinereus
ENSCAPG00000002530	-	77	87.056	ENSPPYG00000008194	TAF15	64	85.464	Pongo_abelii
ENSCAPG00000002530	-	76	79.177	ENSPCAG00000009582	TAF15	75	71.706	Procavia_capensis
ENSCAPG00000002530	-	77	88.550	ENSPCOG00000007032	TAF15	68	86.935	Propithecus_coquereli
ENSCAPG00000002530	-	66	91.810	ENSPVAG00000003952	TAF15	53	90.526	Pteropus_vampyrus
ENSCAPG00000002530	-	77	88.205	ENSRNOG00000054871	LOC103694865	71	86.432	Rattus_norvegicus
ENSCAPG00000002530	-	77	88.205	ENSRNOG00000058393	Taf15	64	94.737	Rattus_norvegicus
ENSCAPG00000002530	-	100	86.283	ENSRBIG00000043192	TAF15	100	83.333	Rhinopithecus_bieti
ENSCAPG00000002530	-	100	86.283	ENSRROG00000029426	TAF15	100	83.333	Rhinopithecus_roxellana
ENSCAPG00000002530	-	83	63.566	ENSSBOG00000032185	-	61	92.079	Saimiri_boliviensis_boliviensis
ENSCAPG00000002530	-	80	94.915	ENSSBOG00000019731	-	100	77.468	Saimiri_boliviensis_boliviensis
ENSCAPG00000002530	-	77	86.514	ENSSHAG00000003105	TAF15	86	75.694	Sarcophilus_harrisii
ENSCAPG00000002530	-	87	86.878	ENSSARG00000012092	TAF15	69	85.678	Sorex_araneus
ENSCAPG00000002530	-	76	59.080	ENSSPUG00000006042	TAF15	91	59.060	Sphenodon_punctatus
ENSCAPG00000002530	-	77	88.295	ENSSSCG00000017707	TAF15	66	86.683	Sus_scrofa
ENSCAPG00000002530	-	76	70.103	ENSTGUG00000004702	TAF15	93	70.663	Taeniopygia_guttata
ENSCAPG00000002530	-	77	87.532	ENSTTRG00000014145	TAF15	72	85.930	Tursiops_truncatus
ENSCAPG00000002530	-	73	85.714	ENSUAMG00000004942	TAF15	85	82.713	Ursus_americanus
ENSCAPG00000002530	-	77	87.532	ENSUMAG00000016876	TAF15	70	86.364	Ursus_maritimus
ENSCAPG00000002530	-	64	82.972	ENSVPAG00000001667	TAF15	53	86.111	Vicugna_pacos
ENSCAPG00000002530	-	77	87.786	ENSVVUG00000020375	TAF15	71	86.181	Vulpes_vulpes
ENSCAPG00000002530	-	77	43.860	ENSXETG00000013477	taf15	90	44.635	Xenopus_tropicalis