EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCAPG00000002544 (Gene tree)
Gene ID
-
Gene Symbol
YTHDF1
Alias
C20orf21|FLJ20391
Full Name
YTH N6-methyladenosine RNA binding protein 1
Gene Type
protein_coding
Species
Cavia_aperea
Status
putative
Strand
Plus strand
Length
9627 bases
Position
chrAVPZ01000022.1:1054054-1063680
Accession
15867
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCAPP00000001346YTHPF04146.158.9e-4211
ENSCAPP00000001342YTHPF04146.159.1e-4211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCAPT00000002845YTHDF1-2011764-ENSCAPP00000001342587 (aa)--
ENSCAPT00000002856YTHDF1-2021746-ENSCAPP00000001346581 (aa)--
Gene Model
Click here to download ENSCAPG00000002544's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000002544's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCAPG00000002544YTHDF19164.928ENSCAPG00000014006YTHDF39864.912
ENSCAPG00000002544YTHDF17369.552ENSCAPG00000014520YTHDF27867.353
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCAPG00000002544YTHDF19491.360ENSG00000149658YTHDF19791.697Homo_sapiens
ENSCAPG00000002544YTHDF19172.302ENSAPOG00000004358ythdf19872.000Acanthochromis_polyacanthus
ENSCAPG00000002544YTHDF19373.192ENSAPOG00000010796YTHDF19772.824Acanthochromis_polyacanthus
ENSCAPG00000002544YTHDF19490.441ENSAMEG00000017323YTHDF19690.775Ailuropoda_melanoleuca
ENSCAPG00000002544YTHDF19069.908ENSACIG00000011264ythdf19769.527Amphilophus_citrinellus
ENSCAPG00000002544YTHDF19373.535ENSACIG00000020083YTHDF19773.571Amphilophus_citrinellus
ENSCAPG00000002544YTHDF19072.978ENSAOCG00000022251ythdf19673.818Amphiprion_ocellaris
ENSCAPG00000002544YTHDF19373.429ENSAOCG00000012567YTHDF19773.609Amphiprion_ocellaris
ENSCAPG00000002544YTHDF19373.609ENSAPEG00000008750YTHDF19773.788Amphiprion_percula
ENSCAPG00000002544YTHDF19373.788ENSATEG00000005996YTHDF19773.345Anabas_testudineus
ENSCAPG00000002544YTHDF19170.750ENSATEG00000023840ythdf19872.939Anabas_testudineus
ENSCAPG00000002544YTHDF19486.630ENSAPLG00000005985YTHDF19787.868Anas_platyrhynchos
ENSCAPG00000002544YTHDF19483.303ENSACAG00000005560YTHDF19783.610Anolis_carolinensis
ENSCAPG00000002544YTHDF19490.809ENSANAG00000034786-9992.110Aotus_nancymaae
ENSCAPG00000002544YTHDF19476.654ENSANAG00000021022-9776.654Aotus_nancymaae
ENSCAPG00000002544YTHDF19373.968ENSACLG00000025518YTHDF19774.147Astatotilapia_calliptera
ENSCAPG00000002544YTHDF19187.833ENSBTAG00000010383YTHDF19988.363Bos_taurus
ENSCAPG00000002544YTHDF19490.809ENSCJAG00000010056YTHDF19791.144Callithrix_jacchus
ENSCAPG00000002544YTHDF18792.308ENSCAFG00000012772YTHDF19992.308Canis_familiaris
ENSCAPG00000002544YTHDF18792.308ENSCAFG00020001214YTHDF19992.308Canis_lupus_dingo
ENSCAPG00000002544YTHDF19187.452ENSCHIG00000026494YTHDF19787.246Capra_hircus
ENSCAPG00000002544YTHDF19391.897ENSTSYG00000033436YTHDF19891.575Carlito_syrichta
ENSCAPG00000002544YTHDF19497.794ENSCPOG00000010202YTHDF19798.155Cavia_porcellus
ENSCAPG00000002544YTHDF19490.441ENSCCAG00000024650YTHDF19790.775Cebus_capucinus
ENSCAPG00000002544YTHDF19491.360ENSCATG00000033272YTHDF19791.697Cercocebus_atys
ENSCAPG00000002544YTHDF19494.495ENSCLAG00000005989YTHDF19894.659Chinchilla_lanigera
ENSCAPG00000002544YTHDF19491.544ENSCSAG00000016266YTHDF19791.882Chlorocebus_sabaeus
ENSCAPG00000002544YTHDF19487.523ENSCPBG00000027183YTHDF19787.293Chrysemys_picta_bellii
ENSCAPG00000002544YTHDF19491.360ENSCANG00000029082YTHDF19791.360Colobus_angolensis_palliatus
ENSCAPG00000002544YTHDF19491.360ENSCGRG00001016568Ythdf19791.697Cricetulus_griseus_chok1gshd
ENSCAPG00000002544YTHDF19491.360ENSCGRG00000009207Ythdf19991.360Cricetulus_griseus_crigri
ENSCAPG00000002544YTHDF19171.269ENSCSEG00000020623YTHDF19873.224Cynoglossus_semilaevis
ENSCAPG00000002544YTHDF19372.272ENSCVAG00000014378YTHDF19972.352Cyprinodon_variegatus
ENSCAPG00000002544YTHDF19370.863ENSCVAG00000017940ythdf19871.223Cyprinodon_variegatus
ENSCAPG00000002544YTHDF19488.051ENSDNOG00000043590YTHDF19788.376Dasypus_novemcinctus
ENSCAPG00000002544YTHDF19388.930ENSDORG00000002879Ythdf19488.930Dipodomys_ordii
ENSCAPG00000002544YTHDF17661.806ENSETEG00000017860-9962.044Echinops_telfairi
ENSCAPG00000002544YTHDF19490.257ENSEASG00005023186YTHDF19790.257Equus_asinus_asinus
ENSCAPG00000002544YTHDF19291.386ENSECAG00000019475YTHDF19991.913Equus_caballus
ENSCAPG00000002544YTHDF18889.844ENSEEUG00000007461YTHDF19989.844Erinaceus_europaeus
ENSCAPG00000002544YTHDF19072.007ENSELUG00000001906YTHDF19970.872Esox_lucius
ENSCAPG00000002544YTHDF19370.877ENSELUG00000022768ythdf19771.454Esox_lucius
ENSCAPG00000002544YTHDF19390.792ENSFCAG00000008917YTHDF19790.792Felis_catus
ENSCAPG00000002544YTHDF19488.073ENSFALG00000010463YTHDF19787.477Ficedula_albicollis
ENSCAPG00000002544YTHDF19493.040ENSFDAG00000019602YTHDF19793.186Fukomys_damarensis
ENSCAPG00000002544YTHDF19372.469ENSFHEG00000002540YTHDF19972.549Fundulus_heteroclitus
ENSCAPG00000002544YTHDF19271.739ENSFHEG00000023218ythdf19772.101Fundulus_heteroclitus
ENSCAPG00000002544YTHDF18088.832ENSGMOG00000019610ythdf18082.407Gadus_morhua
ENSCAPG00000002544YTHDF19486.447ENSGALG00000005745YTHDF19988.409Gallus_gallus
ENSCAPG00000002544YTHDF19372.531ENSGAFG00000021100YTHDF19973.070Gambusia_affinis
ENSCAPG00000002544YTHDF19471.675ENSGACG00000002613YTHDF19770.312Gasterosteus_aculeatus
ENSCAPG00000002544YTHDF19071.119ENSGACG00000012014ythdf19370.475Gasterosteus_aculeatus
ENSCAPG00000002544YTHDF19487.523ENSGAGG00000003007YTHDF19787.293Gopherus_agassizii
ENSCAPG00000002544YTHDF19491.728ENSGGOG00000008340YTHDF19792.066Gorilla_gorilla
ENSCAPG00000002544YTHDF19373.788ENSHBUG00000004875YTHDF19773.968Haplochromis_burtoni
ENSCAPG00000002544YTHDF19071.275ENSHBUG00000011284ythdf19771.076Haplochromis_burtoni
ENSCAPG00000002544YTHDF19494.118ENSHGLG00000006585YTHDF19793.911Heterocephalus_glaber_female
ENSCAPG00000002544YTHDF19494.118ENSHGLG00100004683YTHDF19793.911Heterocephalus_glaber_male
ENSCAPG00000002544YTHDF19370.769ENSHCOG00000011303YTHDF19972.593Hippocampus_comes
ENSCAPG00000002544YTHDF19374.364ENSIPUG00000000425Ythdf19773.599Ictalurus_punctatus
ENSCAPG00000002544YTHDF19491.544ENSSTOG00000023001YTHDF19891.882Ictidomys_tridecemlineatus
ENSCAPG00000002544YTHDF19491.360ENSJJAG00000013589Ythdf19991.360Jaculus_jaculus
ENSCAPG00000002544YTHDF19372.727ENSKMAG00000017472YTHDF19972.890Kryptolebias_marmoratus
ENSCAPG00000002544YTHDF19171.533ENSKMAG00000005595ythdf19871.201Kryptolebias_marmoratus
ENSCAPG00000002544YTHDF19071.719ENSLBEG00000014105ythdf19373.007Labrus_bergylta
ENSCAPG00000002544YTHDF19373.898ENSLBEG00000012068YTHDF19873.205Labrus_bergylta
ENSCAPG00000002544YTHDF19281.434ENSLACG00000014195YTHDF19881.651Latimeria_chalumnae
ENSCAPG00000002544YTHDF19276.980ENSLOCG00000005020ythdf19376.980Lepisosteus_oculatus
ENSCAPG00000002544YTHDF19488.051ENSLAFG00000008884YTHDF19788.376Loxodonta_africana
ENSCAPG00000002544YTHDF19491.544ENSMFAG00000042868YTHDF19791.882Macaca_fascicularis
ENSCAPG00000002544YTHDF19491.544ENSMMUG00000009227YTHDF19791.882Macaca_mulatta
ENSCAPG00000002544YTHDF19491.544ENSMNEG00000030851YTHDF19791.882Macaca_nemestrina
ENSCAPG00000002544YTHDF19491.544ENSMLEG00000009252YTHDF19991.544Mandrillus_leucophaeus
ENSCAPG00000002544YTHDF19374.061ENSMAMG00000011072YTHDF19773.609Mastacembelus_armatus
ENSCAPG00000002544YTHDF19168.953ENSMAMG00000024255ythdf19870.753Mastacembelus_armatus
ENSCAPG00000002544YTHDF19172.101ENSMZEG00005026397ythdf19872.064Maylandia_zebra
ENSCAPG00000002544YTHDF19373.788ENSMZEG00005023596YTHDF19773.968Maylandia_zebra
ENSCAPG00000002544YTHDF19486.447ENSMGAG00000006139YTHDF19787.684Meleagris_gallopavo
ENSCAPG00000002544YTHDF19491.360ENSMAUG00000017660Ythdf19892.208Mesocricetus_auratus
ENSCAPG00000002544YTHDF19491.176ENSMICG00000032266YTHDF19791.513Microcebus_murinus
ENSCAPG00000002544YTHDF19491.728ENSMOCG00000013573Ythdf19792.066Microtus_ochrogaster
ENSCAPG00000002544YTHDF18788.802ENSMODG00000016842YTHDF19988.016Monodelphis_domestica
ENSCAPG00000002544YTHDF19372.920ENSMALG00000022209YTHDF19773.250Monopterus_albus
ENSCAPG00000002544YTHDF19170.557ENSMALG00000015672ythdf19671.252Monopterus_albus
ENSCAPG00000002544YTHDF19491.360MGP_CAROLIEiJ_G0024790Ythdf19791.697Mus_caroli
ENSCAPG00000002544YTHDF19491.360ENSMUSG00000038848Ythdf19791.697Mus_musculus
ENSCAPG00000002544YTHDF19491.360MGP_PahariEiJ_G0026237Ythdf19791.697Mus_pahari
ENSCAPG00000002544YTHDF19491.360MGP_SPRETEiJ_G0025715Ythdf19791.697Mus_spretus
ENSCAPG00000002544YTHDF18785.996ENSMPUG00000008111YTHDF19987.179Mustela_putorius_furo
ENSCAPG00000002544YTHDF19587.230ENSMLUG00000002241YTHDF19887.230Myotis_lucifugus
ENSCAPG00000002544YTHDF19391.713ENSNGAG00000000334Ythdf19791.713Nannospalax_galili
ENSCAPG00000002544YTHDF19470.337ENSNBRG00000008213ythdf19770.745Neolamprologus_brichardi
ENSCAPG00000002544YTHDF19373.788ENSNBRG00000015321YTHDF19773.968Neolamprologus_brichardi
ENSCAPG00000002544YTHDF19279.362ENSOPRG00000001758-9979.550Ochotona_princeps
ENSCAPG00000002544YTHDF19174.763ENSODEG00000000074-9777.413Octodon_degus
ENSCAPG00000002544YTHDF19489.725ENSODEG00000004380-9793.186Octodon_degus
ENSCAPG00000002544YTHDF19070.072ENSONIG00000016799ythdf19670.018Oreochromis_niloticus
ENSCAPG00000002544YTHDF19387.339ENSOANG00000003723YTHDF19786.789Ornithorhynchus_anatinus
ENSCAPG00000002544YTHDF19382.255ENSOCUG00000012780YTHDF19682.255Oryctolagus_cuniculus
ENSCAPG00000002544YTHDF19372.531ENSORLG00000009739YTHDF19972.193Oryzias_latipes
ENSCAPG00000002544YTHDF19071.223ENSORLG00000014665YTHDF19370.423Oryzias_latipes
ENSCAPG00000002544YTHDF19373.273ENSORLG00020001332YTHDF19973.273Oryzias_latipes_hni
ENSCAPG00000002544YTHDF19071.583ENSORLG00020000307ythdf19370.775Oryzias_latipes_hni
ENSCAPG00000002544YTHDF19372.172ENSORLG00015018321YTHDF19971.836Oryzias_latipes_hsok
ENSCAPG00000002544YTHDF19071.403ENSORLG00015006302ythdf19370.599Oryzias_latipes_hsok
ENSCAPG00000002544YTHDF19172.810ENSOMEG00000002941YTHDF19872.193Oryzias_melastigma
ENSCAPG00000002544YTHDF19390.239ENSOGAG00000000480YTHDF19790.406Otolemur_garnettii
ENSCAPG00000002544YTHDF19182.890ENSOARG00000011639YTHDF19683.579Ovis_aries
ENSCAPG00000002544YTHDF19491.728ENSPPAG00000023277YTHDF19892.066Pan_paniscus
ENSCAPG00000002544YTHDF19390.424ENSPPRG00000020805YTHDF19790.424Panthera_pardus
ENSCAPG00000002544YTHDF19379.374ENSPTIG00000017355YTHDF19393.074Panthera_tigris_altaica
ENSCAPG00000002544YTHDF19491.728ENSPTRG00000013730YTHDF19792.066Pan_troglodytes
ENSCAPG00000002544YTHDF19491.544ENSPANG00000021472YTHDF19791.882Papio_anubis
ENSCAPG00000002544YTHDF19367.631ENSPKIG00000005427ythdf19769.495Paramormyrops_kingsleyae
ENSCAPG00000002544YTHDF19370.036ENSPKIG00000005026YTHDF19869.439Paramormyrops_kingsleyae
ENSCAPG00000002544YTHDF19387.037ENSPSIG00000005529YTHDF19687.732Pelodiscus_sinensis
ENSCAPG00000002544YTHDF19167.426ENSPMGG00000015328ythdf19869.483Periophthalmus_magnuspinnatus
ENSCAPG00000002544YTHDF19491.360ENSPEMG00000020199Ythdf19991.697Peromyscus_maniculatus_bairdii
ENSCAPG00000002544YTHDF19387.593ENSPCIG00000017170YTHDF19988.409Phascolarctos_cinereus
ENSCAPG00000002544YTHDF19271.529ENSPFOG00000005405ythdf19371.076Poecilia_formosa
ENSCAPG00000002544YTHDF19372.272ENSPLAG00000006653ythdf19772.202Poecilia_latipinna
ENSCAPG00000002544YTHDF19371.147ENSPMEG00000023753ythdf19771.841Poecilia_mexicana
ENSCAPG00000002544YTHDF19372.172ENSPMEG00000020969-9672.531Poecilia_mexicana
ENSCAPG00000002544YTHDF19768.182ENSPREG00000002173ythdf19772.333Poecilia_reticulata
ENSCAPG00000002544YTHDF18295.980ENSPPYG00000011226YTHDF19895.980Pongo_abelii
ENSCAPG00000002544YTHDF18585.051ENSPCAG00000002452YTHDF110085.207Procavia_capensis
ENSCAPG00000002544YTHDF19491.728ENSPCOG00000025969YTHDF19792.066Propithecus_coquereli
ENSCAPG00000002544YTHDF19380.855ENSPVAG00000017568YTHDF19781.784Pteropus_vampyrus
ENSCAPG00000002544YTHDF19373.788ENSPNYG00000002266YTHDF19773.968Pundamilia_nyererei
ENSCAPG00000002544YTHDF19172.101ENSPNYG00000014007ythdf19872.064Pundamilia_nyererei
ENSCAPG00000002544YTHDF19491.176ENSRNOG00000027015Ythdf19791.513Rattus_norvegicus
ENSCAPG00000002544YTHDF19490.625ENSRBIG00000044959YTHDF19790.959Rhinopithecus_bieti
ENSCAPG00000002544YTHDF19490.441ENSRROG00000033014YTHDF19790.775Rhinopithecus_roxellana
ENSCAPG00000002544YTHDF19389.094ENSSBOG00000027278YTHDF19989.744Saimiri_boliviensis_boliviensis
ENSCAPG00000002544YTHDF19486.996ENSSHAG00000010430YTHDF18787.363Sarcophilus_harrisii
ENSCAPG00000002544YTHDF19472.500ENSSFOG00015000284ythdf19573.750Scleropages_formosus
ENSCAPG00000002544YTHDF16582.781ENSSMAG00000013715ythdf19664.535Scophthalmus_maximus
ENSCAPG00000002544YTHDF19079.435ENSSMAG00000007635YTHDF19372.809Scophthalmus_maximus
ENSCAPG00000002544YTHDF19472.487ENSSDUG00000015823YTHDF19772.809Seriola_dumerili
ENSCAPG00000002544YTHDF19172.232ENSSDUG00000000435ythdf19872.487Seriola_dumerili
ENSCAPG00000002544YTHDF19371.715ENSSLDG00000001054YTHDF19671.898Seriola_lalandi_dorsalis
ENSCAPG00000002544YTHDF19069.527ENSSLDG00000024948ythdf19570.377Seriola_lalandi_dorsalis
ENSCAPG00000002544YTHDF18785.236ENSSPUG00000015143YTHDF19985.236Sphenodon_punctatus
ENSCAPG00000002544YTHDF19373.070ENSSPAG00000003666YTHDF19673.070Stegastes_partitus
ENSCAPG00000002544YTHDF19386.029ENSSSCG00000040086YTHDF19786.029Sus_scrofa
ENSCAPG00000002544YTHDF19486.447ENSTGUG00000007565YTHDF19887.868Taeniopygia_guttata
ENSCAPG00000002544YTHDF19071.147ENSTRUG00000004288ythdf19571.278Takifugu_rubripes
ENSCAPG00000002544YTHDF19471.377ENSTNIG00000003975YTHDF19771.275Tetraodon_nigroviridis
ENSCAPG00000002544YTHDF19072.023ENSTNIG00000012490ythdf19672.761Tetraodon_nigroviridis
ENSCAPG00000002544YTHDF19287.850ENSTTRG00000001804YTHDF19687.850Tursiops_truncatus
ENSCAPG00000002544YTHDF19390.959ENSUAMG00000011021YTHDF19991.913Ursus_americanus
ENSCAPG00000002544YTHDF18791.519ENSUMAG00000022290YTHDF19991.519Ursus_maritimus
ENSCAPG00000002544YTHDF18791.913ENSVVUG00000015275YTHDF19991.913Vulpes_vulpes
ENSCAPG00000002544YTHDF19481.555ENSXETG00000027086ythdf19881.004Xenopus_tropicalis
ENSCAPG00000002544YTHDF19369.965ENSXCOG00000002490ythdf19671.352Xiphophorus_couchianus
ENSCAPG00000002544YTHDF19373.788ENSXMAG00000015644YTHDF19973.250Xiphophorus_maculatus
ENSCAPG00000002544YTHDF19271.869ENSXMAG00000008525ythdf19672.232Xiphophorus_maculatus

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