EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAPG00000002667 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Minus strand
Length: 1968 bases
Position: chrAVPZ01000789.1:4993221-4995188
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000001412	zf-C2H2	PF00096.26	2.7e-77	1	14
ENSCAPP00000001412	zf-C2H2	PF00096.26	2.7e-77	2	14
ENSCAPP00000001412	zf-C2H2	PF00096.26	2.7e-77	3	14
ENSCAPP00000001412	zf-C2H2	PF00096.26	2.7e-77	4	14
ENSCAPP00000001412	zf-C2H2	PF00096.26	2.7e-77	5	14
ENSCAPP00000001412	zf-C2H2	PF00096.26	2.7e-77	6	14
ENSCAPP00000001412	zf-C2H2	PF00096.26	2.7e-77	7	14
ENSCAPP00000001412	zf-C2H2	PF00096.26	2.7e-77	8	14
ENSCAPP00000001412	zf-C2H2	PF00096.26	2.7e-77	9	14
ENSCAPP00000001412	zf-C2H2	PF00096.26	2.7e-77	10	14
ENSCAPP00000001412	zf-C2H2	PF00096.26	2.7e-77	11	14
ENSCAPP00000001412	zf-C2H2	PF00096.26	2.7e-77	12	14
ENSCAPP00000001412	zf-C2H2	PF00096.26	2.7e-77	13	14
ENSCAPP00000001412	zf-C2H2	PF00096.26	2.7e-77	14	14
ENSCAPP00000001405	zf-C2H2	PF00096.26	3.8e-74	1	13
ENSCAPP00000001405	zf-C2H2	PF00096.26	3.8e-74	2	13
ENSCAPP00000001405	zf-C2H2	PF00096.26	3.8e-74	3	13
ENSCAPP00000001405	zf-C2H2	PF00096.26	3.8e-74	4	13
ENSCAPP00000001405	zf-C2H2	PF00096.26	3.8e-74	5	13
ENSCAPP00000001405	zf-C2H2	PF00096.26	3.8e-74	6	13
ENSCAPP00000001405	zf-C2H2	PF00096.26	3.8e-74	7	13
ENSCAPP00000001405	zf-C2H2	PF00096.26	3.8e-74	8	13
ENSCAPP00000001405	zf-C2H2	PF00096.26	3.8e-74	9	13
ENSCAPP00000001405	zf-C2H2	PF00096.26	3.8e-74	10	13
ENSCAPP00000001405	zf-C2H2	PF00096.26	3.8e-74	11	13
ENSCAPP00000001405	zf-C2H2	PF00096.26	3.8e-74	12	13
ENSCAPP00000001405	zf-C2H2	PF00096.26	3.8e-74	13	13
ENSCAPP00000001412	zf-met	PF12874.7	1.1e-11	1	3
ENSCAPP00000001412	zf-met	PF12874.7	1.1e-11	2	3
ENSCAPP00000001412	zf-met	PF12874.7	1.1e-11	3	3
ENSCAPP00000001405	zf-met	PF12874.7	1.3e-09	1	3
ENSCAPP00000001405	zf-met	PF12874.7	1.3e-09	2	3
ENSCAPP00000001405	zf-met	PF12874.7	1.3e-09	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000003004	-	1860	-	ENSCAPP00000001405	619 (aa)	-	-
ENSCAPT00000003022	-	1770	-	ENSCAPP00000001412	590 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000002667's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000002667's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAPG00000002667	-	74	46.939	ENSCAPG00000015217	PRDM5	86	46.939
ENSCAPG00000002667	-	78	49.606	ENSCAPG00000006920	-	96	53.541
ENSCAPG00000002667	-	69	37.113	ENSCAPG00000000623	ZNF770	96	31.556
ENSCAPG00000002667	-	77	54.217	ENSCAPG00000016810	ZFP69	82	54.217
ENSCAPG00000002667	-	74	42.507	ENSCAPG00000007129	ZNF319	91	43.915
ENSCAPG00000002667	-	74	37.037	ENSCAPG00000014613	ZNF423	90	37.037
ENSCAPG00000002667	-	78	38.333	ENSCAPG00000012228	ZBTB48	57	38.596
ENSCAPG00000002667	-	70	43.571	ENSCAPG00000012608	-	73	43.571
ENSCAPG00000002667	-	83	40.288	ENSCAPG00000009816	ZNF236	70	40.288
ENSCAPG00000002667	-	79	48.276	ENSCAPG00000012455	MYNN	53	46.948
ENSCAPG00000002667	-	67	35.955	ENSCAPG00000000389	ZNF574	95	38.522
ENSCAPG00000002667	-	74	53.815	ENSCAPG00000017499	ZNF2	82	53.815
ENSCAPG00000002667	-	74	34.320	ENSCAPG00000015862	GTF3A	90	38.393
ENSCAPG00000002667	-	74	47.170	ENSCAPG00000000045	WT1	67	43.697
ENSCAPG00000002667	-	74	48.246	ENSCAPG00000016268	-	100	52.439
ENSCAPG00000002667	-	76	51.131	ENSCAPG00000003129	-	86	51.637
ENSCAPG00000002667	-	65	46.575	ENSCAPG00000014002	SNAI1	51	42.991
ENSCAPG00000002667	-	67	40.909	ENSCAPG00000004720	ZNF526	82	37.241
ENSCAPG00000002667	-	80	42.857	ENSCAPG00000012135	SALL4	54	47.170
ENSCAPG00000002667	-	74	45.679	ENSCAPG00000004697	ZNF202	75	45.122
ENSCAPG00000002667	-	74	37.879	ENSCAPG00000009522	ZNF865	70	37.363
ENSCAPG00000002667	-	73	37.500	ENSCAPG00000003638	ZNF212	51	34.118
ENSCAPG00000002667	-	64	43.590	ENSCAPG00000005775	OVOL2	74	43.590
ENSCAPG00000002667	-	73	55.102	ENSCAPG00000006496	SALL3	60	47.170
ENSCAPG00000002667	-	63	41.538	ENSCAPG00000007934	-	81	41.538
ENSCAPG00000002667	-	75	40.000	ENSCAPG00000013078	SNAI2	73	40.000
ENSCAPG00000002667	-	70	30.909	ENSCAPG00000006001	ZNF646	78	32.456
ENSCAPG00000002667	-	67	35.971	ENSCAPG00000007257	ZNF652	52	35.971
ENSCAPG00000002667	-	74	45.652	ENSCAPG00000010404	GFI1B	55	45.652
ENSCAPG00000002667	-	67	41.558	ENSCAPG00000012873	ZBTB6	62	41.558
ENSCAPG00000002667	-	77	49.863	ENSCAPG00000013118	-	87	50.758

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000002667	-	100	79.459	ENSG00000159917	ZNF235	89	79.459	Homo_sapiens
ENSCAPG00000002667	-	100	74.960	ENSAMEG00000012930	ZNF235	92	74.563	Ailuropoda_melanoleuca
ENSCAPG00000002667	-	100	79.459	ENSANAG00000037223	ZNF235	89	76.104	Aotus_nancymaae
ENSCAPG00000002667	-	99	73.676	ENSBTAG00000007714	ZNF235	91	73.676	Bos_taurus
ENSCAPG00000002667	-	100	79.618	ENSCJAG00000039837	ZNF235	86	79.618	Callithrix_jacchus
ENSCAPG00000002667	-	100	79.066	ENSCAFG00000031857	ZNF235	89	75.342	Canis_familiaris
ENSCAPG00000002667	-	100	79.227	ENSCAFG00020013058	ZNF235	92	75.495	Canis_lupus_dingo
ENSCAPG00000002667	-	99	72.480	ENSCHIG00000014937	ZNF235	88	72.480	Capra_hircus
ENSCAPG00000002667	-	99	79.775	ENSTSYG00000027063	ZNF235	88	79.775	Carlito_syrichta
ENSCAPG00000002667	-	100	93.435	ENSCPOG00000039731	ZNF235	97	91.450	Cavia_porcellus
ENSCAPG00000002667	-	100	78.503	ENSCCAG00000037645	ZNF235	89	75.190	Cebus_capucinus
ENSCAPG00000002667	-	100	79.299	ENSCATG00000029278	ZNF235	88	79.299	Cercocebus_atys
ENSCAPG00000002667	-	100	78.822	ENSCSAG00000003323	ZNF235	94	78.822	Chlorocebus_sabaeus
ENSCAPG00000002667	-	100	79.936	ENSCANG00000029539	ZNF235	89	79.936	Colobus_angolensis_palliatus
ENSCAPG00000002667	-	99	67.145	ENSCGRG00001015424	-	100	75.267	Cricetulus_griseus_chok1gshd
ENSCAPG00000002667	-	99	75.637	ENSDNOG00000042106	ZNF235	98	71.994	Dasypus_novemcinctus
ENSCAPG00000002667	-	99	77.368	ENSEASG00005013637	ZNF235	95	77.368	Equus_asinus_asinus
ENSCAPG00000002667	-	99	77.368	ENSECAG00000023724	ZNF235	93	77.368	Equus_caballus
ENSCAPG00000002667	-	99	72.115	ENSEEUG00000006864	ZNF235	84	72.115	Erinaceus_europaeus
ENSCAPG00000002667	-	100	78.583	ENSFCAG00000043995	ZNF235	85	78.583	Felis_catus
ENSCAPG00000002667	-	99	82.022	ENSFDAG00000015590	ZNF235	88	82.022	Fukomys_damarensis
ENSCAPG00000002667	-	100	79.459	ENSGGOG00000008607	ZNF235	89	79.459	Gorilla_gorilla
ENSCAPG00000002667	-	100	83.280	ENSHGLG00000003657	ZNF235	90	83.280	Heterocephalus_glaber_female
ENSCAPG00000002667	-	99	84.808	ENSHGLG00100010077	ZNF235	99	84.808	Heterocephalus_glaber_male
ENSCAPG00000002667	-	99	60.261	ENSJJAG00000024260	-	99	63.946	Jaculus_jaculus
ENSCAPG00000002667	-	99	78.710	ENSLAFG00000011186	ZNF235	95	78.710	Loxodonta_africana
ENSCAPG00000002667	-	100	79.299	ENSMFAG00000035923	ZNF235	88	79.299	Macaca_fascicularis
ENSCAPG00000002667	-	100	79.299	ENSMMUG00000012801	ZNF235	95	79.299	Macaca_mulatta
ENSCAPG00000002667	-	100	79.140	ENSMNEG00000028194	ZNF235	88	79.140	Macaca_nemestrina
ENSCAPG00000002667	-	100	79.140	ENSMLEG00000034346	ZNF235	89	79.140	Mandrillus_leucophaeus
ENSCAPG00000002667	-	100	79.618	ENSMICG00000004971	ZNF235	88	79.618	Microcebus_murinus
ENSCAPG00000002667	-	100	71.061	ENSMOCG00000017799	-	89	71.061	Microtus_ochrogaster
ENSCAPG00000002667	-	100	78.261	ENSMPUG00000006476	ZNF235	89	74.277	Mustela_putorius_furo
ENSCAPG00000002667	-	100	74.920	ENSMLUG00000013784	ZNF235	90	74.920	Myotis_lucifugus
ENSCAPG00000002667	-	99	77.134	ENSNGAG00000010473	-	94	77.134	Nannospalax_galili
ENSCAPG00000002667	-	99	81.672	ENSODEG00000008851	-	100	78.034	Octodon_degus
ENSCAPG00000002667	-	97	71.808	ENSOCUG00000017842	ZNF235	92	71.808	Oryctolagus_cuniculus
ENSCAPG00000002667	-	100	79.459	ENSPPAG00000031448	ZNF235	89	79.459	Pan_paniscus
ENSCAPG00000002667	-	100	78.100	ENSPPRG00000014617	ZNF235	85	78.100	Panthera_pardus
ENSCAPG00000002667	-	100	78.261	ENSPTIG00000021573	ZNF235	85	78.261	Panthera_tigris_altaica
ENSCAPG00000002667	-	100	79.299	ENSPTRG00000011112	ZNF235	88	79.299	Pan_troglodytes
ENSCAPG00000002667	-	100	78.822	ENSPANG00000006495	ZNF235	88	78.822	Papio_anubis
ENSCAPG00000002667	-	100	78.981	ENSPPYG00000010086	ZNF235	88	78.981	Pongo_abelii
ENSCAPG00000002667	-	100	73.309	ENSPCAG00000005203	ZNF235	87	73.309	Procavia_capensis
ENSCAPG00000002667	-	100	78.822	ENSPCOG00000022996	ZNF235	88	78.822	Propithecus_coquereli
ENSCAPG00000002667	-	99	74.839	ENSPVAG00000004392	ZNF235	88	74.839	Pteropus_vampyrus
ENSCAPG00000002667	-	100	79.299	ENSRBIG00000026071	ZNF235	89	79.299	Rhinopithecus_bieti
ENSCAPG00000002667	-	100	79.459	ENSRROG00000033359	ZNF235	88	79.459	Rhinopithecus_roxellana
ENSCAPG00000002667	-	100	79.459	ENSSBOG00000028285	ZNF235	89	76.256	Saimiri_boliviensis_boliviensis
ENSCAPG00000002667	-	98	80.679	ENSSARG00000008140	ZNF235	86	83.371	Sorex_araneus
ENSCAPG00000002667	-	100	70.692	ENSSSCG00000022434	ZNF235	90	70.692	Sus_scrofa
ENSCAPG00000002667	-	100	78.080	ENSTBEG00000001345	ZNF235	88	78.080	Tupaia_belangeri
ENSCAPG00000002667	-	99	76.603	ENSTTRG00000006707	ZNF235	89	73.364	Tursiops_truncatus
ENSCAPG00000002667	-	100	77.778	ENSUAMG00000005458	ZNF235	93	74.429	Ursus_americanus
ENSCAPG00000002667	-	100	77.778	ENSUMAG00000023068	ZNF235	89	74.125	Ursus_maritimus
ENSCAPG00000002667	-	71	92.435	ENSVPAG00000000139	ZNF235	66	88.710	Vicugna_pacos
ENSCAPG00000002667	-	100	78.744	ENSVVUG00000008581	ZNF235	94	75.038	Vulpes_vulpes