EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAPG00000002723 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 2456 bases
Position: chrAVPZ01000667.1:59002315-59004770
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000001417	RRM_1	PF00076.22	1.5e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000003046	-	1137	-	ENSCAPP00000001417	378 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000002723's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000002723's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAPG00000002723	-	100	54.964	ENSCAPG00000006522	-	100	54.237
ENSCAPG00000002723	-	100	68.201	ENSCAPG00000011616	-	100	69.665
ENSCAPG00000002723	-	99	53.229	ENSCAPG00000002354	-	97	53.125

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000002723	-	100	70.488	ENSG00000147140	NONO	99	83.058	Homo_sapiens
ENSCAPG00000002723	-	90	50.718	ENSAPOG00000023320	nono	95	52.143	Acanthochromis_polyacanthus
ENSCAPG00000002723	-	100	70.851	ENSAMEG00000016057	NONO	100	71.277	Ailuropoda_melanoleuca
ENSCAPG00000002723	-	93	52.693	ENSACIG00000019987	nono	94	53.461	Amphilophus_citrinellus
ENSCAPG00000002723	-	90	51.319	ENSAOCG00000018863	nono	95	51.559	Amphiprion_ocellaris
ENSCAPG00000002723	-	76	55.682	ENSAPEG00000011383	nono	86	55.966	Amphiprion_percula
ENSCAPG00000002723	-	88	62.559	ENSAPLG00000002642	NONO	98	65.166	Anas_platyrhynchos
ENSCAPG00000002723	-	100	62.741	ENSACAG00000015026	NONO	99	64.530	Anolis_carolinensis
ENSCAPG00000002723	-	100	70.488	ENSANAG00000033266	-	100	70.913	Aotus_nancymaae
ENSCAPG00000002723	-	99	47.768	ENSANAG00000035751	-	99	49.554	Aotus_nancymaae
ENSCAPG00000002723	-	99	64.206	ENSANAG00000027089	-	99	64.877	Aotus_nancymaae
ENSCAPG00000002723	-	73	58.017	ENSACLG00000012045	nono	91	58.309	Astatotilapia_calliptera
ENSCAPG00000002723	-	96	50.685	ENSAMXG00000033933	nono	91	52.941	Astyanax_mexicanus
ENSCAPG00000002723	-	100	70.638	ENSBTAG00000012152	NONO	100	71.064	Bos_taurus
ENSCAPG00000002723	-	100	70.488	ENSCJAG00000036744	NONO	100	70.913	Callithrix_jacchus
ENSCAPG00000002723	-	100	70.851	ENSCAFG00000003207	-	100	70.851	Canis_familiaris
ENSCAPG00000002723	-	90	69.720	ENSCAFG00000030809	-	96	70.175	Canis_familiaris
ENSCAPG00000002723	-	100	51.429	ENSCAFG00000013766	-	100	54.286	Canis_familiaris
ENSCAPG00000002723	-	100	70.851	ENSCAFG00000017071	NONO	100	71.277	Canis_familiaris
ENSCAPG00000002723	-	100	68.085	ENSCAFG00020020298	-	100	68.511	Canis_lupus_dingo
ENSCAPG00000002723	-	100	70.638	ENSCHIG00000000365	-	100	71.064	Capra_hircus
ENSCAPG00000002723	-	74	61.003	ENSCHIG00000009602	-	90	63.056	Capra_hircus
ENSCAPG00000002723	-	100	64.786	ENSTSYG00000034207	-	99	66.817	Carlito_syrichta
ENSCAPG00000002723	-	100	67.516	ENSTSYG00000007423	-	99	67.728	Carlito_syrichta
ENSCAPG00000002723	-	99	60.044	ENSTSYG00000036306	-	100	63.617	Carlito_syrichta
ENSCAPG00000002723	-	100	65.302	ENSCPOG00000038668	-	100	66.379	Cavia_porcellus
ENSCAPG00000002723	-	100	69.087	ENSCPOG00000010263	-	100	69.295	Cavia_porcellus
ENSCAPG00000002723	-	82	72.703	ENSCPOG00000036719	-	93	73.514	Cavia_porcellus
ENSCAPG00000002723	-	100	54.444	ENSCPOG00000026604	-	99	53.675	Cavia_porcellus
ENSCAPG00000002723	-	100	68.894	ENSCPOG00000023605	-	100	69.102	Cavia_porcellus
ENSCAPG00000002723	-	100	67.467	ENSCATG00000039509	NONO	100	68.341	Cercocebus_atys
ENSCAPG00000002723	-	100	69.831	ENSCLAG00000003642	NONO	100	69.831	Chinchilla_lanigera
ENSCAPG00000002723	-	100	62.971	ENSCPBG00000016659	NONO	100	62.971	Chrysemys_picta_bellii
ENSCAPG00000002723	-	100	70.488	ENSCANG00000025310	NONO	100	70.913	Colobus_angolensis_palliatus
ENSCAPG00000002723	-	100	69.703	ENSCGRG00001000065	Nono	100	69.703	Cricetulus_griseus_chok1gshd
ENSCAPG00000002723	-	87	69.928	ENSCGRG00000004508	Nono	100	70.167	Cricetulus_griseus_crigri
ENSCAPG00000002723	-	95	51.724	ENSCSEG00000010708	nono	90	53.365	Cynoglossus_semilaevis
ENSCAPG00000002723	-	94	51.494	ENSCSEG00000008189	NONO	94	53.365	Cynoglossus_semilaevis
ENSCAPG00000002723	-	97	49.111	ENSCVAG00000003978	nono	94	51.196	Cyprinodon_variegatus
ENSCAPG00000002723	-	100	49.103	ENSDARG00000020482	nono	92	51.716	Danio_rerio
ENSCAPG00000002723	-	64	60.284	ENSDNOG00000032215	-	99	60.072	Dasypus_novemcinctus
ENSCAPG00000002723	-	74	53.497	ENSDNOG00000031430	-	100	53.497	Dasypus_novemcinctus
ENSCAPG00000002723	-	100	71.734	ENSDORG00000009294	Nono	100	71.734	Dipodomys_ordii
ENSCAPG00000002723	-	94	76.596	ENSETEG00000013823	NONO	64	77.703	Echinops_telfairi
ENSCAPG00000002723	-	100	70.851	ENSECAG00000008502	NONO	100	71.277	Equus_caballus
ENSCAPG00000002723	-	100	71.795	ENSEEUG00000014404	NONO	100	71.368	Erinaceus_europaeus
ENSCAPG00000002723	-	100	50.989	ENSELUG00000001083	nono	93	53.957	Esox_lucius
ENSCAPG00000002723	-	100	70.851	ENSFCAG00000043511	-	100	71.277	Felis_catus
ENSCAPG00000002723	-	100	54.860	ENSFALG00000011765	NONO	100	56.344	Ficedula_albicollis
ENSCAPG00000002723	-	100	70.851	ENSFDAG00000012809	-	100	71.277	Fukomys_damarensis
ENSCAPG00000002723	-	100	58.444	ENSFDAG00000006143	-	100	61.319	Fukomys_damarensis
ENSCAPG00000002723	-	77	54.596	ENSFHEG00000009714	nono	85	54.545	Fundulus_heteroclitus
ENSCAPG00000002723	-	100	61.088	ENSGALG00000005507	NONO	100	63.180	Gallus_gallus
ENSCAPG00000002723	-	77	56.389	ENSGAFG00000011460	nono	92	53.846	Gambusia_affinis
ENSCAPG00000002723	-	96	50.679	ENSGACG00000011824	nono	94	52.644	Gasterosteus_aculeatus
ENSCAPG00000002723	-	100	64.392	ENSGAGG00000025400	-	91	64.392	Gopherus_agassizii
ENSCAPG00000002723	-	100	64.238	ENSGGOG00000036327	-	99	65.342	Gorilla_gorilla
ENSCAPG00000002723	-	90	74.877	ENSGGOG00000006194	NONO	93	74.515	Gorilla_gorilla
ENSCAPG00000002723	-	90	53.699	ENSHBUG00000010741	nono	94	53.938	Haplochromis_burtoni
ENSCAPG00000002723	-	100	70.913	ENSHGLG00000005550	NONO	100	70.488	Heterocephalus_glaber_female
ENSCAPG00000002723	-	100	70.913	ENSHGLG00100013511	NONO	100	70.488	Heterocephalus_glaber_male
ENSCAPG00000002723	-	90	53.186	ENSHCOG00000016441	nono	93	53.431	Hippocampus_comes
ENSCAPG00000002723	-	86	52.882	ENSIPUG00000018271	nono	91	52.346	Ictalurus_punctatus
ENSCAPG00000002723	-	100	70.851	ENSSTOG00000015869	NONO	100	71.277	Ictidomys_tridecemlineatus
ENSCAPG00000002723	-	100	70.638	ENSJJAG00000017151	-	100	70.851	Jaculus_jaculus
ENSCAPG00000002723	-	100	65.116	ENSJJAG00000001971	-	100	66.047	Jaculus_jaculus
ENSCAPG00000002723	-	100	50.110	ENSKMAG00000002798	nono	100	50.000	Kryptolebias_marmoratus
ENSCAPG00000002723	-	87	54.453	ENSLBEG00000022623	nono	90	54.453	Labrus_bergylta
ENSCAPG00000002723	-	72	58.982	ENSLACG00000000598	NONO	84	62.286	Latimeria_chalumnae
ENSCAPG00000002723	-	100	52.688	ENSLOCG00000014739	nono	93	55.319	Lepisosteus_oculatus
ENSCAPG00000002723	-	100	70.763	ENSLAFG00000013422	NONO	100	70.339	Loxodonta_africana
ENSCAPG00000002723	-	100	70.488	ENSMFAG00000041557	NONO	100	70.913	Macaca_fascicularis
ENSCAPG00000002723	-	78	67.801	ENSMMUG00000020481	NONO	100	68.325	Macaca_mulatta
ENSCAPG00000002723	-	100	70.488	ENSMNEG00000009698	NONO	100	70.913	Macaca_nemestrina
ENSCAPG00000002723	-	100	70.488	ENSMLEG00000042452	NONO	100	70.913	Mandrillus_leucophaeus
ENSCAPG00000002723	-	96	51.693	ENSMAMG00000007314	nono	94	53.237	Mastacembelus_armatus
ENSCAPG00000002723	-	73	58.017	ENSMZEG00005010199	nono	91	58.309	Maylandia_zebra
ENSCAPG00000002723	-	82	71.037	ENSMGAG00000008869	NONO	98	65.166	Meleagris_gallopavo
ENSCAPG00000002723	-	100	70.253	ENSMAUG00000016243	Nono	100	69.409	Mesocricetus_auratus
ENSCAPG00000002723	-	100	70.000	ENSMICG00000000232	NONO	100	70.426	Microcebus_murinus
ENSCAPG00000002723	-	92	70.805	ENSMOCG00000005532	-	95	70.862	Microtus_ochrogaster
ENSCAPG00000002723	-	100	62.281	ENSMOCG00000021293	-	100	62.939	Microtus_ochrogaster
ENSCAPG00000002723	-	100	62.557	ENSMOCG00000020099	-	95	62.785	Microtus_ochrogaster
ENSCAPG00000002723	-	95	50.917	ENSMMOG00000015503	nono	85	52.785	Mola_mola
ENSCAPG00000002723	-	91	67.586	ENSMODG00000004445	NONO	99	67.209	Monodelphis_domestica
ENSCAPG00000002723	-	83	53.403	ENSMALG00000001310	nono	87	55.220	Monopterus_albus
ENSCAPG00000002723	-	100	69.767	ENSMUSG00000031311	Nono	100	77.551	Mus_musculus
ENSCAPG00000002723	-	100	69.474	MGP_PahariEiJ_G0031826	Nono	100	69.053	Mus_pahari
ENSCAPG00000002723	-	100	70.851	ENSMPUG00000004937	NONO	100	71.277	Mustela_putorius_furo
ENSCAPG00000002723	-	100	70.213	ENSMLUG00000002489	NONO	89	70.638	Myotis_lucifugus
ENSCAPG00000002723	-	100	70.878	ENSNGAG00000010857	Nono	100	71.306	Nannospalax_galili
ENSCAPG00000002723	-	90	53.699	ENSNBRG00000017083	nono	94	53.938	Neolamprologus_brichardi
ENSCAPG00000002723	-	100	67.516	ENSNLEG00000001278	NONO	100	68.325	Nomascus_leucogenys
ENSCAPG00000002723	-	100	59.958	ENSMEUG00000004294	NONO	100	59.746	Notamacropus_eugenii
ENSCAPG00000002723	-	61	98.387	ENSOPRG00000001139	-	67	98.387	Ochotona_princeps
ENSCAPG00000002723	-	100	65.784	ENSODEG00000002994	-	100	65.939	Octodon_degus
ENSCAPG00000002723	-	100	67.308	ENSODEG00000002224	-	100	68.376	Octodon_degus
ENSCAPG00000002723	-	89	57.796	ENSODEG00000000530	-	88	58.602	Octodon_degus
ENSCAPG00000002723	-	100	55.023	ENSODEG00000011878	-	100	56.849	Octodon_degus
ENSCAPG00000002723	-	96	45.622	ENSODEG00000004982	-	99	47.032	Octodon_degus
ENSCAPG00000002723	-	90	53.461	ENSONIG00000020497	nono	94	53.699	Oreochromis_niloticus
ENSCAPG00000002723	-	99	47.856	ENSOCUG00000024801	-	97	48.081	Oryctolagus_cuniculus
ENSCAPG00000002723	-	99	66.173	ENSOCUG00000021848	-	90	70.492	Oryctolagus_cuniculus
ENSCAPG00000002723	-	95	49.657	ENSORLG00000012801	nono	94	50.957	Oryzias_latipes
ENSCAPG00000002723	-	76	55.840	ENSORLG00020003761	nono	79	56.125	Oryzias_latipes_hni
ENSCAPG00000002723	-	95	49.657	ENSORLG00015018033	nono	94	50.957	Oryzias_latipes_hsok
ENSCAPG00000002723	-	95	50.457	ENSOMEG00000012702	nono	94	51.914	Oryzias_melastigma
ENSCAPG00000002723	-	100	71.125	ENSOGAG00000004834	NONO	100	70.913	Otolemur_garnettii
ENSCAPG00000002723	-	100	70.638	ENSOARG00000016966	NONO	99	71.064	Ovis_aries
ENSCAPG00000002723	-	100	64.410	ENSPPAG00000041394	-	99	65.066	Pan_paniscus
ENSCAPG00000002723	-	100	70.488	ENSPPAG00000032487	NONO	100	70.913	Pan_paniscus
ENSCAPG00000002723	-	100	70.851	ENSPPRG00000024537	-	100	71.277	Panthera_pardus
ENSCAPG00000002723	-	100	70.213	ENSPTIG00000016068	-	100	70.426	Panthera_tigris_altaica
ENSCAPG00000002723	-	100	64.410	ENSPTRG00000051228	-	100	64.629	Pan_troglodytes
ENSCAPG00000002723	-	100	70.488	ENSPTRG00000022010	NONO	100	70.913	Pan_troglodytes
ENSCAPG00000002723	-	100	51.271	ENSPANG00000035017	-	99	51.907	Papio_anubis
ENSCAPG00000002723	-	100	70.488	ENSPANG00000013979	NONO	100	70.913	Papio_anubis
ENSCAPG00000002723	-	87	50.246	ENSPKIG00000019475	-	91	50.000	Paramormyrops_kingsleyae
ENSCAPG00000002723	-	100	50.109	ENSPKIG00000014500	nono	93	53.333	Paramormyrops_kingsleyae
ENSCAPG00000002723	-	100	63.966	ENSPSIG00000010678	NONO	99	64.179	Pelodiscus_sinensis
ENSCAPG00000002723	-	95	49.885	ENSPMGG00000023030	nono	93	51.707	Periophthalmus_magnuspinnatus
ENSCAPG00000002723	-	100	69.915	ENSPEMG00000011150	Nono	100	69.915	Peromyscus_maniculatus_bairdii
ENSCAPG00000002723	-	100	62.971	ENSPCIG00000026515	NONO	100	62.971	Phascolarctos_cinereus
ENSCAPG00000002723	-	77	53.955	ENSPFOG00000016436	nono	94	50.856	Poecilia_formosa
ENSCAPG00000002723	-	77	55.278	ENSPLAG00000017492	nono	93	52.289	Poecilia_latipinna
ENSCAPG00000002723	-	86	52.030	ENSPMEG00000021530	nono	87	53.665	Poecilia_mexicana
ENSCAPG00000002723	-	87	53.266	ENSPREG00000010014	nono	93	52.771	Poecilia_reticulata
ENSCAPG00000002723	-	100	70.913	ENSPPYG00000020451	NONO	100	70.913	Pongo_abelii
ENSCAPG00000002723	-	100	69.053	ENSPCAG00000002541	NONO	100	69.474	Procavia_capensis
ENSCAPG00000002723	-	100	70.851	ENSPCOG00000008197	NONO	100	71.277	Propithecus_coquereli
ENSCAPG00000002723	-	100	70.213	ENSPVAG00000016503	NONO	100	70.426	Pteropus_vampyrus
ENSCAPG00000002723	-	96	50.339	ENSPNAG00000008232	nono	82	52.812	Pygocentrus_nattereri
ENSCAPG00000002723	-	100	69.182	ENSRNOG00000003689	Nono	100	69.328	Rattus_norvegicus
ENSCAPG00000002723	-	67	77.365	ENSRBIG00000037966	NONO	81	78.041	Rhinopithecus_bieti
ENSCAPG00000002723	-	100	70.276	ENSRROG00000043203	NONO	100	70.701	Rhinopithecus_roxellana
ENSCAPG00000002723	-	100	69.147	ENSSBOG00000027683	-	99	69.935	Saimiri_boliviensis_boliviensis
ENSCAPG00000002723	-	100	70.276	ENSSBOG00000032772	-	100	70.701	Saimiri_boliviensis_boliviensis
ENSCAPG00000002723	-	99	57.363	ENSSBOG00000018932	-	73	85.455	Saimiri_boliviensis_boliviensis
ENSCAPG00000002723	-	100	66.038	ENSSHAG00000010195	NONO	100	65.828	Sarcophilus_harrisii
ENSCAPG00000002723	-	66	53.055	ENSSFOG00015000137	-	91	47.643	Scleropages_formosus
ENSCAPG00000002723	-	90	54.524	ENSSFOG00015008964	nono	90	58.462	Scleropages_formosus
ENSCAPG00000002723	-	95	51.264	ENSSDUG00000021886	nono	94	52.758	Seriola_dumerili
ENSCAPG00000002723	-	95	51.264	ENSSLDG00000012392	nono	94	52.758	Seriola_lalandi_dorsalis
ENSCAPG00000002723	-	100	65.385	ENSSARG00000007959	NONO	100	65.171	Sorex_araneus
ENSCAPG00000002723	-	78	57.292	ENSSPUG00000003116	NONO	100	60.938	Sphenodon_punctatus
ENSCAPG00000002723	-	90	52.632	ENSSPAG00000012663	nono	95	52.871	Stegastes_partitus
ENSCAPG00000002723	-	100	70.851	ENSSSCG00000023245	NONO	100	71.277	Sus_scrofa
ENSCAPG00000002723	-	100	61.814	ENSTGUG00000007048	NONO	100	63.404	Taeniopygia_guttata
ENSCAPG00000002723	-	96	50.905	ENSTRUG00000005554	nono	94	53.571	Takifugu_rubripes
ENSCAPG00000002723	-	100	70.851	ENSTTRG00000009605	NONO	100	71.277	Tursiops_truncatus
ENSCAPG00000002723	-	100	68.085	ENSUAMG00000008220	NONO	100	68.511	Ursus_americanus
ENSCAPG00000002723	-	100	70.851	ENSUMAG00000021550	NONO	100	71.277	Ursus_maritimus
ENSCAPG00000002723	-	100	70.851	ENSVPAG00000002272	NONO	100	71.277	Vicugna_pacos
ENSCAPG00000002723	-	100	66.385	ENSVVUG00000003390	-	100	66.808	Vulpes_vulpes
ENSCAPG00000002723	-	100	54.292	ENSXETG00000020868	nono	99	54.936	Xenopus_tropicalis
ENSCAPG00000002723	-	77	56.389	ENSXCOG00000015587	nono	92	53.846	Xiphophorus_couchianus
ENSCAPG00000002723	-	77	56.389	ENSXMAG00000019883	nono	92	53.846	Xiphophorus_maculatus