EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAPG00000002890 (Gene tree)
Gene ID: -
Gene Symbol: SMARCA2
Alias: BAF190|BRM|SNF2|SNF2L2|SNF2LA|SWI2|Sth1p|hBRM|hSNF2a
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 2
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Minus strand
Length: 158786 bases
Position: chrAVPZ01000134.1:17645154-17803939
Accession: 11098
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000001594	ResIII	PF04851.15	1.4e-08	1	1
ENSCAPP00000001587	ResIII	PF04851.15	1.4e-08	1	1
ENSCAPP00000001581	ResIII	PF04851.15	1.4e-08	1	1
ENSCAPP00000001587	BRK	PF07533.16	1.5e-17	1	1
ENSCAPP00000001594	BRK	PF07533.16	1.5e-17	1	1
ENSCAPP00000001581	BRK	PF07533.16	1.6e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000003638	SMARCA2-205	204	-	ENSCAPP00000001606	68 (aa)	-	UPI000719A11A
ENSCAPT00000003593	SMARCA2-202	4623	-	ENSCAPP00000001587	1541 (aa)	-	-
ENSCAPT00000003605	SMARCA2-203	4569	-	ENSCAPP00000001594	1523 (aa)	-	-
ENSCAPT00000003626	SMARCA2-204	801	-	ENSCAPP00000001600	267 (aa)	-	-
ENSCAPT00000003578	SMARCA2-201	4710	-	ENSCAPP00000001581	1569 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000002890's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000002890's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAPG00000002890	SMARCA2	92	72.690	ENSCAPG00000015932	SMARCA4	79	82.467

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000002890	SMARCA2	99	93.287	ENSG00000080503	SMARCA2	100	100.000	Homo_sapiens
ENSCAPG00000002890	SMARCA2	99	78.508	ENSAPOG00000002641	SMARCA2	97	79.133	Acanthochromis_polyacanthus
ENSCAPG00000002890	SMARCA2	91	84.973	ENSAMEG00000012325	SMARCA2	99	95.422	Ailuropoda_melanoleuca
ENSCAPG00000002890	SMARCA2	99	77.580	ENSACIG00000015607	SMARCA2	97	78.080	Amphilophus_citrinellus
ENSCAPG00000002890	SMARCA2	99	78.613	ENSAOCG00000009647	-	97	78.837	Amphiprion_ocellaris
ENSCAPG00000002890	SMARCA2	99	78.380	ENSAPEG00000007646	SMARCA2	96	80.044	Amphiprion_percula
ENSCAPG00000002890	SMARCA2	99	78.776	ENSATEG00000006916	SMARCA2	96	78.063	Anabas_testudineus
ENSCAPG00000002890	SMARCA2	89	85.826	ENSAPLG00000013873	SMARCA2	94	85.216	Anas_platyrhynchos
ENSCAPG00000002890	SMARCA2	99	87.080	ENSACAG00000002423	SMARCA2	99	86.906	Anolis_carolinensis
ENSCAPG00000002890	SMARCA2	99	93.718	ENSANAG00000026498	SMARCA2	99	93.401	Aotus_nancymaae
ENSCAPG00000002890	SMARCA2	99	78.356	ENSACLG00000004248	SMARCA2	97	79.202	Astatotilapia_calliptera
ENSCAPG00000002890	SMARCA2	99	80.862	ENSAMXG00000012404	smarca2	97	80.039	Astyanax_mexicanus
ENSCAPG00000002890	SMARCA2	100	92.559	ENSBTAG00000007494	SMARCA2	99	92.239	Bos_taurus
ENSCAPG00000002890	SMARCA2	99	93.466	ENSCJAG00000010710	SMARCA2	99	92.582	Callithrix_jacchus
ENSCAPG00000002890	SMARCA2	100	92.708	ENSCAFG00000002013	SMARCA2	99	93.088	Canis_familiaris
ENSCAPG00000002890	SMARCA2	77	91.222	ENSCAFG00020026802	SMARCA2	98	91.222	Canis_lupus_dingo
ENSCAPG00000002890	SMARCA2	100	92.264	ENSCHIG00000025863	SMARCA2	99	93.152	Capra_hircus
ENSCAPG00000002890	SMARCA2	100	92.798	ENSTSYG00000003858	SMARCA2	99	92.672	Carlito_syrichta
ENSCAPG00000002890	SMARCA2	100	96.662	ENSCPOG00000005475	SMARCA2	100	96.662	Cavia_porcellus
ENSCAPG00000002890	SMARCA2	99	93.722	ENSCCAG00000030636	SMARCA2	99	93.405	Cebus_capucinus
ENSCAPG00000002890	SMARCA2	99	93.726	ENSCATG00000031470	SMARCA2	99	93.726	Cercocebus_atys
ENSCAPG00000002890	SMARCA2	100	94.940	ENSCLAG00000014484	SMARCA2	99	95.003	Chinchilla_lanigera
ENSCAPG00000002890	SMARCA2	94	92.916	ENSCSAG00000008650	SMARCA2	99	92.371	Chlorocebus_sabaeus
ENSCAPG00000002890	SMARCA2	87	91.081	ENSCHOG00000004316	SMARCA2	86	91.081	Choloepus_hoffmanni
ENSCAPG00000002890	SMARCA2	99	87.797	ENSCPBG00000025463	SMARCA2	99	88.604	Chrysemys_picta_bellii
ENSCAPG00000002890	SMARCA2	99	93.655	ENSCANG00000039597	SMARCA2	99	93.147	Colobus_angolensis_palliatus
ENSCAPG00000002890	SMARCA2	100	85.995	ENSCGRG00001002323	Smarca2	99	85.624	Cricetulus_griseus_chok1gshd
ENSCAPG00000002890	SMARCA2	99	76.660	ENSCSEG00000019311	SMARCA2	97	76.756	Cynoglossus_semilaevis
ENSCAPG00000002890	SMARCA2	85	77.861	ENSCVAG00000016571	SMARCA2	75	83.858	Cyprinodon_variegatus
ENSCAPG00000002890	SMARCA2	99	80.000	ENSDARG00000008904	smarca2	97	79.961	Danio_rerio
ENSCAPG00000002890	SMARCA2	100	90.932	ENSDNOG00000006402	SMARCA2	99	91.693	Dasypus_novemcinctus
ENSCAPG00000002890	SMARCA2	100	93.156	ENSDORG00000014832	Smarca2	99	92.916	Dipodomys_ordii
ENSCAPG00000002890	SMARCA2	87	60.795	ENSEBUG00000002449	-	84	65.982	Eptatretus_burgeri
ENSCAPG00000002890	SMARCA2	95	70.007	ENSEBUG00000011442	-	97	69.014	Eptatretus_burgeri
ENSCAPG00000002890	SMARCA2	100	92.752	ENSEASG00005010312	SMARCA2	99	92.367	Equus_asinus_asinus
ENSCAPG00000002890	SMARCA2	68	98.611	ENSEEUG00000015540	-	69	98.611	Erinaceus_europaeus
ENSCAPG00000002890	SMARCA2	93	79.473	ENSELUG00000010318	smarca2	96	76.817	Esox_lucius
ENSCAPG00000002890	SMARCA2	99	92.411	ENSFCAG00000001568	SMARCA2	99	92.517	Felis_catus
ENSCAPG00000002890	SMARCA2	99	85.949	ENSFALG00000010416	SMARCA2	99	87.762	Ficedula_albicollis
ENSCAPG00000002890	SMARCA2	100	93.079	ENSFDAG00000010502	SMARCA2	99	92.444	Fukomys_damarensis
ENSCAPG00000002890	SMARCA2	99	78.650	ENSFHEG00000021250	SMARCA2	97	78.650	Fundulus_heteroclitus
ENSCAPG00000002890	SMARCA2	98	75.405	ENSGMOG00000014229	SMARCA2	97	75.567	Gadus_morhua
ENSCAPG00000002890	SMARCA2	99	88.660	ENSGALG00000010164	SMARCA2	99	88.796	Gallus_gallus
ENSCAPG00000002890	SMARCA2	95	75.521	ENSGAFG00000001164	SMARCA2	93	75.377	Gambusia_affinis
ENSCAPG00000002890	SMARCA2	99	77.119	ENSGACG00000014488	SMARCA2	97	77.038	Gasterosteus_aculeatus
ENSCAPG00000002890	SMARCA2	99	88.452	ENSGAGG00000024412	SMARCA2	99	88.732	Gopherus_agassizii
ENSCAPG00000002890	SMARCA2	99	89.771	ENSGGOG00000000513	SMARCA2	84	92.447	Gorilla_gorilla
ENSCAPG00000002890	SMARCA2	99	78.141	ENSHBUG00000006691	SMARCA2	96	78.982	Haplochromis_burtoni
ENSCAPG00000002890	SMARCA2	100	93.786	ENSHGLG00000005215	SMARCA2	99	93.430	Heterocephalus_glaber_female
ENSCAPG00000002890	SMARCA2	100	93.338	ENSHGLG00100010496	SMARCA2	99	92.766	Heterocephalus_glaber_male
ENSCAPG00000002890	SMARCA2	89	74.280	ENSHCOG00000015348	-	88	86.318	Hippocampus_comes
ENSCAPG00000002890	SMARCA2	99	78.817	ENSIPUG00000011060	smarca2	97	79.313	Ictalurus_punctatus
ENSCAPG00000002890	SMARCA2	100	94.371	ENSSTOG00000006812	SMARCA2	99	94.371	Ictidomys_tridecemlineatus
ENSCAPG00000002890	SMARCA2	100	93.029	ENSJJAG00000010867	Smarca2	99	92.722	Jaculus_jaculus
ENSCAPG00000002890	SMARCA2	99	77.561	ENSKMAG00000015844	-	97	77.977	Kryptolebias_marmoratus
ENSCAPG00000002890	SMARCA2	97	81.417	ENSLOCG00000011499	smarca2	82	85.233	Lepisosteus_oculatus
ENSCAPG00000002890	SMARCA2	100	90.032	ENSLAFG00000014061	SMARCA2	82	92.857	Loxodonta_africana
ENSCAPG00000002890	SMARCA2	99	92.825	ENSMFAG00000003814	SMARCA2	99	92.190	Macaca_fascicularis
ENSCAPG00000002890	SMARCA2	99	93.528	ENSMMUG00000015279	SMARCA2	99	93.211	Macaca_mulatta
ENSCAPG00000002890	SMARCA2	99	93.797	ENSMNEG00000041069	SMARCA2	99	93.797	Macaca_nemestrina
ENSCAPG00000002890	SMARCA2	99	91.931	ENSMLEG00000027418	SMARCA2	99	91.233	Mandrillus_leucophaeus
ENSCAPG00000002890	SMARCA2	99	79.104	ENSMAMG00000003056	SMARCA2	97	80.428	Mastacembelus_armatus
ENSCAPG00000002890	SMARCA2	99	78.292	ENSMZEG00005020709	SMARCA2	97	78.766	Maylandia_zebra
ENSCAPG00000002890	SMARCA2	80	69.775	ENSMGAG00000005160	-	99	69.187	Meleagris_gallopavo
ENSCAPG00000002890	SMARCA2	100	93.025	ENSMICG00000005162	SMARCA2	99	92.771	Microcebus_murinus
ENSCAPG00000002890	SMARCA2	100	93.097	ENSMOCG00000001611	Smarca2	99	92.400	Microtus_ochrogaster
ENSCAPG00000002890	SMARCA2	99	78.109	ENSMMOG00000014196	SMARCA2	97	78.298	Mola_mola
ENSCAPG00000002890	SMARCA2	100	88.553	ENSMODG00000003578	SMARCA2	99	88.994	Monodelphis_domestica
ENSCAPG00000002890	SMARCA2	99	79.221	ENSMALG00000009611	SMARCA2	97	79.034	Monopterus_albus
ENSCAPG00000002890	SMARCA2	99	92.604	MGP_CAROLIEiJ_G0022841	Smarca2	99	92.143	Mus_caroli
ENSCAPG00000002890	SMARCA2	99	92.536	ENSMUSG00000024921	Smarca2	99	98.000	Mus_musculus
ENSCAPG00000002890	SMARCA2	99	92.391	MGP_PahariEiJ_G0014334	Smarca2	99	92.371	Mus_pahari
ENSCAPG00000002890	SMARCA2	99	92.415	MGP_SPRETEiJ_G0023759	Smarca2	93	100.000	Mus_spretus
ENSCAPG00000002890	SMARCA2	80	95.272	ENSMPUG00000005171	SMARCA2	94	95.272	Mustela_putorius_furo
ENSCAPG00000002890	SMARCA2	100	86.864	ENSMLUG00000002342	SMARCA2	82	88.584	Myotis_lucifugus
ENSCAPG00000002890	SMARCA2	100	92.332	ENSNGAG00000000108	Smarca2	99	92.142	Nannospalax_galili
ENSCAPG00000002890	SMARCA2	94	68.132	ENSNBRG00000017998	SMARCA2	94	83.085	Neolamprologus_brichardi
ENSCAPG00000002890	SMARCA2	99	91.169	ENSNLEG00000008575	SMARCA2	99	90.597	Nomascus_leucogenys
ENSCAPG00000002890	SMARCA2	100	81.905	ENSMEUG00000009812	SMARCA2	99	82.413	Notamacropus_eugenii
ENSCAPG00000002890	SMARCA2	100	87.181	ENSOPRG00000013474	SMARCA2	99	86.862	Ochotona_princeps
ENSCAPG00000002890	SMARCA2	100	92.516	ENSODEG00000005452	SMARCA2	99	93.774	Octodon_degus
ENSCAPG00000002890	SMARCA2	99	77.869	ENSONIG00000014163	SMARCA2	97	78.113	Oreochromis_niloticus
ENSCAPG00000002890	SMARCA2	100	92.097	ENSOCUG00000006320	SMARCA2	99	91.778	Oryctolagus_cuniculus
ENSCAPG00000002890	SMARCA2	99	78.011	ENSORLG00000020820	SMARCA2	97	78.007	Oryzias_latipes
ENSCAPG00000002890	SMARCA2	99	77.827	ENSORLG00015006289	SMARCA2	97	78.063	Oryzias_latipes_hsok
ENSCAPG00000002890	SMARCA2	99	78.392	ENSOMEG00000009736	-	97	78.837	Oryzias_melastigma
ENSCAPG00000002890	SMARCA2	100	90.321	ENSOGAG00000017053	SMARCA2	99	89.818	Otolemur_garnettii
ENSCAPG00000002890	SMARCA2	100	91.544	ENSOARG00000013265	SMARCA2	99	91.031	Ovis_aries
ENSCAPG00000002890	SMARCA2	99	89.974	ENSPPAG00000038717	SMARCA2	99	90.633	Pan_paniscus
ENSCAPG00000002890	SMARCA2	99	92.474	ENSPPRG00000001879	SMARCA2	99	92.581	Panthera_pardus
ENSCAPG00000002890	SMARCA2	99	92.780	ENSPTRG00000051168	SMARCA2	99	92.780	Pan_troglodytes
ENSCAPG00000002890	SMARCA2	99	89.574	ENSPANG00000025121	SMARCA2	99	88.552	Papio_anubis
ENSCAPG00000002890	SMARCA2	100	79.846	ENSPKIG00000018469	-	97	79.908	Paramormyrops_kingsleyae
ENSCAPG00000002890	SMARCA2	99	87.781	ENSPSIG00000006284	SMARCA2	99	88.164	Pelodiscus_sinensis
ENSCAPG00000002890	SMARCA2	99	72.786	ENSPMGG00000013696	-	97	73.442	Periophthalmus_magnuspinnatus
ENSCAPG00000002890	SMARCA2	100	92.283	ENSPEMG00000019821	Smarca2	99	91.651	Peromyscus_maniculatus_bairdii
ENSCAPG00000002890	SMARCA2	95	71.125	ENSPMAG00000005337	-	80	73.231	Petromyzon_marinus
ENSCAPG00000002890	SMARCA2	100	90.173	ENSPCIG00000015658	SMARCA2	99	90.623	Phascolarctos_cinereus
ENSCAPG00000002890	SMARCA2	99	77.925	ENSPFOG00000001856	SMARCA2	97	76.790	Poecilia_formosa
ENSCAPG00000002890	SMARCA2	99	77.421	ENSPLAG00000017829	SMARCA2	80	81.166	Poecilia_latipinna
ENSCAPG00000002890	SMARCA2	99	77.311	ENSPMEG00000001815	-	97	76.209	Poecilia_mexicana
ENSCAPG00000002890	SMARCA2	99	77.170	ENSPREG00000013800	SMARCA2	96	76.333	Poecilia_reticulata
ENSCAPG00000002890	SMARCA2	99	93.654	ENSPPYG00000019258	SMARCA2	99	93.654	Pongo_abelii
ENSCAPG00000002890	SMARCA2	76	80.458	ENSPCAG00000016969	SMARCA2	77	81.306	Procavia_capensis
ENSCAPG00000002890	SMARCA2	100	91.508	ENSPCOG00000025709	SMARCA2	99	91.122	Propithecus_coquereli
ENSCAPG00000002890	SMARCA2	90	98.883	ENSPVAG00000000901	SMARCA2	94	98.883	Pteropus_vampyrus
ENSCAPG00000002890	SMARCA2	99	74.728	ENSPNYG00000004533	SMARCA2	97	75.309	Pundamilia_nyererei
ENSCAPG00000002890	SMARCA2	99	79.745	ENSPNAG00000014635	smarca2	96	80.481	Pygocentrus_nattereri
ENSCAPG00000002890	SMARCA2	100	91.992	ENSRNOG00000011931	Smarca2	99	92.182	Rattus_norvegicus
ENSCAPG00000002890	SMARCA2	99	92.159	ENSRBIG00000038618	SMARCA2	99	91.260	Rhinopithecus_bieti
ENSCAPG00000002890	SMARCA2	99	92.567	ENSRROG00000019271	SMARCA2	99	92.115	Rhinopithecus_roxellana
ENSCAPG00000002890	SMARCA2	99	89.835	ENSSBOG00000034827	SMARCA2	99	89.590	Saimiri_boliviensis_boliviensis
ENSCAPG00000002890	SMARCA2	100	88.302	ENSSHAG00000007884	SMARCA2	99	88.176	Sarcophilus_harrisii
ENSCAPG00000002890	SMARCA2	91	80.729	ENSSFOG00015014870	SMARCA2	94	80.671	Scleropages_formosus
ENSCAPG00000002890	SMARCA2	99	79.215	ENSSMAG00000013707	SMARCA2	97	78.896	Scophthalmus_maximus
ENSCAPG00000002890	SMARCA2	99	79.948	ENSSDUG00000008852	-	96	80.302	Seriola_dumerili
ENSCAPG00000002890	SMARCA2	99	80.219	ENSSLDG00000025449	SMARCA2	96	80.118	Seriola_lalandi_dorsalis
ENSCAPG00000002890	SMARCA2	90	97.207	ENSSARG00000007888	SMARCA2	88	97.207	Sorex_araneus
ENSCAPG00000002890	SMARCA2	94	83.311	ENSSPUG00000001629	SMARCA2	97	85.387	Sphenodon_punctatus
ENSCAPG00000002890	SMARCA2	99	78.435	ENSSPAG00000020091	-	97	78.303	Stegastes_partitus
ENSCAPG00000002890	SMARCA2	100	92.517	ENSSSCG00000005232	SMARCA2	99	92.264	Sus_scrofa
ENSCAPG00000002890	SMARCA2	97	85.594	ENSTGUG00000005460	SMARCA2	97	87.178	Taeniopygia_guttata
ENSCAPG00000002890	SMARCA2	99	78.067	ENSTRUG00000015619	SMARCA2	97	78.350	Takifugu_rubripes
ENSCAPG00000002890	SMARCA2	67	100.000	ENSTBEG00000008767	SMARCA2	74	100.000	Tupaia_belangeri
ENSCAPG00000002890	SMARCA2	95	92.027	ENSTTRG00000002033	SMARCA2	95	91.229	Tursiops_truncatus
ENSCAPG00000002890	SMARCA2	89	90.251	ENSUAMG00000024701	SMARCA2	99	90.473	Ursus_americanus
ENSCAPG00000002890	SMARCA2	91	83.846	ENSVPAG00000001204	SMARCA2	93	92.857	Vicugna_pacos
ENSCAPG00000002890	SMARCA2	76	93.491	ENSVVUG00000004598	SMARCA2	99	93.491	Vulpes_vulpes
ENSCAPG00000002890	SMARCA2	100	80.462	ENSXETG00000015299	smarca2	80	86.311	Xenopus_tropicalis
ENSCAPG00000002890	SMARCA2	90	77.738	ENSXCOG00000011073	SMARCA2	97	77.899	Xiphophorus_couchianus
ENSCAPG00000002890	SMARCA2	99	78.035	ENSXMAG00000015611	SMARCA2	96	76.282	Xiphophorus_maculatus