EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAPG00000003129 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Minus strand
Length: 8231 bases
Position: chrAVPZ01000152.1:517594-525824
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000001558	zf-C2H2	PF00096.26	1.8e-117	1	20
ENSCAPP00000001558	zf-C2H2	PF00096.26	1.8e-117	2	20
ENSCAPP00000001558	zf-C2H2	PF00096.26	1.8e-117	3	20
ENSCAPP00000001558	zf-C2H2	PF00096.26	1.8e-117	4	20
ENSCAPP00000001558	zf-C2H2	PF00096.26	1.8e-117	5	20
ENSCAPP00000001558	zf-C2H2	PF00096.26	1.8e-117	6	20
ENSCAPP00000001558	zf-C2H2	PF00096.26	1.8e-117	7	20
ENSCAPP00000001558	zf-C2H2	PF00096.26	1.8e-117	8	20
ENSCAPP00000001558	zf-C2H2	PF00096.26	1.8e-117	9	20
ENSCAPP00000001558	zf-C2H2	PF00096.26	1.8e-117	10	20
ENSCAPP00000001558	zf-C2H2	PF00096.26	1.8e-117	11	20
ENSCAPP00000001558	zf-C2H2	PF00096.26	1.8e-117	12	20
ENSCAPP00000001558	zf-C2H2	PF00096.26	1.8e-117	13	20
ENSCAPP00000001558	zf-C2H2	PF00096.26	1.8e-117	14	20
ENSCAPP00000001558	zf-C2H2	PF00096.26	1.8e-117	15	20
ENSCAPP00000001558	zf-C2H2	PF00096.26	1.8e-117	16	20
ENSCAPP00000001558	zf-C2H2	PF00096.26	1.8e-117	17	20
ENSCAPP00000001558	zf-C2H2	PF00096.26	1.8e-117	18	20
ENSCAPP00000001558	zf-C2H2	PF00096.26	1.8e-117	19	20
ENSCAPP00000001558	zf-C2H2	PF00096.26	1.8e-117	20	20
ENSCAPP00000001558	zf-met	PF12874.7	9.6e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000003479	-	2403	-	ENSCAPP00000001558	801 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000003129's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000003129's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAPG00000003129	-	73	53.061	ENSCAPG00000012135	SALL4	55	53.061
ENSCAPG00000003129	-	78	45.333	ENSCAPG00000005775	OVOL2	79	45.333
ENSCAPG00000003129	-	85	47.664	ENSCAPG00000012455	MYNN	55	47.664
ENSCAPG00000003129	-	80	41.176	ENSCAPG00000015862	GTF3A	98	33.047
ENSCAPG00000003129	-	80	47.887	ENSCAPG00000015217	PRDM5	89	47.887
ENSCAPG00000003129	-	86	40.110	ENSCAPG00000007129	ZNF319	94	38.243
ENSCAPG00000003129	-	83	50.633	ENSCAPG00000013118	-	77	49.764
ENSCAPG00000003129	-	86	52.586	ENSCAPG00000006920	-	89	52.586
ENSCAPG00000003129	-	83	54.582	ENSCAPG00000016810	ZFP69	91	54.582
ENSCAPG00000003129	-	81	41.026	ENSCAPG00000012228	ZBTB48	56	41.026
ENSCAPG00000003129	-	82	40.964	ENSCAPG00000009816	ZNF236	78	40.964
ENSCAPG00000003129	-	80	44.030	ENSCAPG00000013078	SNAI2	62	44.030
ENSCAPG00000003129	-	74	30.556	ENSCAPG00000017296	PRDM10	52	30.556
ENSCAPG00000003129	-	70	46.226	ENSCAPG00000000045	WT1	54	44.954
ENSCAPG00000003129	-	86	51.637	ENSCAPG00000002667	-	76	51.131
ENSCAPG00000003129	-	83	45.794	ENSCAPG00000014002	SNAI1	53	46.552
ENSCAPG00000003129	-	75	39.474	ENSCAPG00000012873	ZBTB6	55	39.474
ENSCAPG00000003129	-	81	32.897	ENSCAPG00000000389	ZNF574	95	34.909
ENSCAPG00000003129	-	84	45.806	ENSCAPG00000010404	GFI1B	68	45.806
ENSCAPG00000003129	-	84	45.000	ENSCAPG00000012608	-	74	45.000
ENSCAPG00000003129	-	82	30.963	ENSCAPG00000009522	ZNF865	75	33.755
ENSCAPG00000003129	-	80	41.935	ENSCAPG00000003638	ZNF212	52	41.935
ENSCAPG00000003129	-	84	52.000	ENSCAPG00000017499	ZNF2	90	51.600
ENSCAPG00000003129	-	81	57.143	ENSCAPG00000006496	SALL3	59	45.283
ENSCAPG00000003129	-	64	41.538	ENSCAPG00000007934	-	99	41.538
ENSCAPG00000003129	-	81	51.754	ENSCAPG00000016268	-	100	51.754

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000003129	-	94	90.648	ENSCPOG00000034004	-	97	90.648	Cavia_porcellus
ENSCAPG00000003129	-	94	92.188	ENSCLAG00000012556	-	94	92.188	Chinchilla_lanigera
ENSCAPG00000003129	-	95	78.043	ENSCGRG00001000576	Zfp26	84	78.043	Cricetulus_griseus_chok1gshd
ENSCAPG00000003129	-	95	78.043	ENSCGRG00000010436	-	84	78.043	Cricetulus_griseus_crigri
ENSCAPG00000003129	-	92	81.646	ENSCGRG00000000280	-	97	81.646	Cricetulus_griseus_crigri
ENSCAPG00000003129	-	94	78.900	ENSDORG00000027564	Zfp26	87	78.900	Dipodomys_ordii
ENSCAPG00000003129	-	94	90.507	ENSFDAG00000009594	-	90	90.507	Fukomys_damarensis
ENSCAPG00000003129	-	98	85.082	ENSHGLG00000005362	-	90	85.082	Heterocephalus_glaber_female
ENSCAPG00000003129	-	94	90.397	ENSHGLG00100007268	-	94	90.397	Heterocephalus_glaber_male
ENSCAPG00000003129	-	95	79.328	ENSSTOG00000023536	-	87	79.328	Ictidomys_tridecemlineatus
ENSCAPG00000003129	-	95	77.958	ENSJJAG00000020082	-	93	77.958	Jaculus_jaculus
ENSCAPG00000003129	-	94	81.496	ENSMAUG00000017074	Zfp26	94	81.496	Mesocricetus_auratus
ENSCAPG00000003129	-	94	77.778	ENSMOCG00000015724	Zfp26	93	77.778	Microtus_ochrogaster
ENSCAPG00000003129	-	95	76.588	ENSMUSG00000063108	Zfp26	84	76.588	Mus_musculus
ENSCAPG00000003129	-	95	78.429	ENSNGAG00000020695	Zfp26	84	78.429	Nannospalax_galili
ENSCAPG00000003129	-	95	89.560	ENSODEG00000016460	-	93	89.560	Octodon_degus
ENSCAPG00000003129	-	94	63.764	ENSOCUG00000029276	-	98	63.764	Oryctolagus_cuniculus
ENSCAPG00000003129	-	95	77.307	ENSPEMG00000016507	Zfp26	84	77.307	Peromyscus_maniculatus_bairdii
ENSCAPG00000003129	-	95	77.736	ENSRNOG00000025937	Zfp26	99	77.736	Rattus_norvegicus