EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000003300 (Gene tree)
Gene ID: -
Gene Symbol: SCAF8
Alias: KIAA1116|RBM16
Full Name: SR-related CTD associated factor 8
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 34067 bases
Position: chrAVPZ01000356.1:8955807-8989873
Accession: 20959
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000001623	RRM_1	PF00076.22	7.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000003696	SCAF8-201	2694	-	ENSCAPP00000001623	897 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000003300's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000003300's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000003300	SCAF8	85	98.684	ENSG00000213079	SCAF8	79	70.370	Homo_sapiens
ENSCAPG00000003300	SCAF8	85	98.246	ENSAMEG00000007583	SCAF8	62	98.276	Ailuropoda_melanoleuca
ENSCAPG00000003300	SCAF8	71	72.000	ENSAOCG00000002421	SCAF8	57	72.000	Amphiprion_ocellaris
ENSCAPG00000003300	SCAF8	72	72.000	ENSAPEG00000020115	SCAF8	61	72.000	Amphiprion_percula
ENSCAPG00000003300	SCAF8	71	81.967	ENSATEG00000006959	SCAF8	64	70.667	Anabas_testudineus
ENSCAPG00000003300	SCAF8	85	88.596	ENSAPLG00000005765	SCAF8	64	88.793	Anas_platyrhynchos
ENSCAPG00000003300	SCAF8	84	90.164	ENSACAG00000005282	SCAF8	63	90.164	Anolis_carolinensis
ENSCAPG00000003300	SCAF8	86	98.246	ENSANAG00000036184	SCAF8	65	98.276	Aotus_nancymaae
ENSCAPG00000003300	SCAF8	70	72.000	ENSACLG00000018828	SCAF8	59	72.000	Astatotilapia_calliptera
ENSCAPG00000003300	SCAF8	88	96.491	ENSBTAG00000031917	SCAF8	65	96.552	Bos_taurus
ENSCAPG00000003300	SCAF8	85	98.246	ENSCJAG00000012631	SCAF8	62	98.276	Callithrix_jacchus
ENSCAPG00000003300	SCAF8	85	98.246	ENSCAFG00000000570	SCAF8	79	70.370	Canis_familiaris
ENSCAPG00000003300	SCAF8	85	98.246	ENSCAFG00020015048	SCAF8	78	70.370	Canis_lupus_dingo
ENSCAPG00000003300	SCAF8	88	96.491	ENSCHIG00000025041	SCAF8	65	96.552	Capra_hircus
ENSCAPG00000003300	SCAF8	92	98.502	ENSTSYG00000010991	SCAF8	64	98.276	Carlito_syrichta
ENSCAPG00000003300	SCAF8	99	74.895	ENSCPOG00000030311	-	80	90.588	Cavia_porcellus
ENSCAPG00000003300	SCAF8	86	100.000	ENSCPOG00000022216	-	78	93.500	Cavia_porcellus
ENSCAPG00000003300	SCAF8	85	97.368	ENSCCAG00000024952	SCAF8	65	97.414	Cebus_capucinus
ENSCAPG00000003300	SCAF8	86	98.684	ENSCATG00000035361	SCAF8	66	98.707	Cercocebus_atys
ENSCAPG00000003300	SCAF8	97	75.406	ENSCLAG00000004910	SCAF8	89	70.882	Chinchilla_lanigera
ENSCAPG00000003300	SCAF8	86	98.684	ENSCSAG00000013430	SCAF8	64	98.707	Chlorocebus_sabaeus
ENSCAPG00000003300	SCAF8	85	88.596	ENSCPBG00000016330	SCAF8	60	88.793	Chrysemys_picta_bellii
ENSCAPG00000003300	SCAF8	86	98.246	ENSCANG00000039499	SCAF8	66	98.276	Colobus_angolensis_palliatus
ENSCAPG00000003300	SCAF8	71	70.667	ENSCSEG00000000043	-	54	70.667	Cynoglossus_semilaevis
ENSCAPG00000003300	SCAF8	71	69.231	ENSCVAG00000000925	SCAF8	56	70.667	Cyprinodon_variegatus
ENSCAPG00000003300	SCAF8	86	96.053	ENSDNOG00000025271	SCAF8	68	96.121	Dasypus_novemcinctus
ENSCAPG00000003300	SCAF8	94	98.876	ENSDORG00000006391	Scaf8	82	98.893	Dipodomys_ordii
ENSCAPG00000003300	SCAF8	86	98.246	ENSEASG00005018879	SCAF8	65	98.276	Equus_asinus_asinus
ENSCAPG00000003300	SCAF8	87	98.246	ENSECAG00000005540	SCAF8	65	98.276	Equus_caballus
ENSCAPG00000003300	SCAF8	71	69.231	ENSELUG00000002779	SCAF8	70	73.239	Esox_lucius
ENSCAPG00000003300	SCAF8	91	98.462	ENSFCAG00000023424	SCAF8	81	87.823	Felis_catus
ENSCAPG00000003300	SCAF8	88	70.370	ENSFALG00000012433	SCAF8	79	70.370	Ficedula_albicollis
ENSCAPG00000003300	SCAF8	86	99.561	ENSFDAG00000010335	SCAF8	65	99.569	Fukomys_damarensis
ENSCAPG00000003300	SCAF8	71	69.231	ENSFHEG00000008284	SCAF8	57	70.667	Fundulus_heteroclitus
ENSCAPG00000003300	SCAF8	85	89.224	ENSGALG00000013635	SCAF8	78	70.370	Gallus_gallus
ENSCAPG00000003300	SCAF8	71	70.667	ENSGAFG00000018033	SCAF8	58	70.667	Gambusia_affinis
ENSCAPG00000003300	SCAF8	70	69.758	ENSGACG00000006909	SCAF8	62	69.758	Gasterosteus_aculeatus
ENSCAPG00000003300	SCAF8	69	87.037	ENSGAGG00000017820	-	69	87.273	Gopherus_agassizii
ENSCAPG00000003300	SCAF8	86	98.684	ENSGGOG00000008645	SCAF8	65	98.707	Gorilla_gorilla
ENSCAPG00000003300	SCAF8	70	72.000	ENSHBUG00000019537	SCAF8	59	72.000	Haplochromis_burtoni
ENSCAPG00000003300	SCAF8	85	98.684	ENSHGLG00000003619	SCAF8	65	98.707	Heterocephalus_glaber_female
ENSCAPG00000003300	SCAF8	85	98.684	ENSHGLG00100004708	SCAF8	66	98.707	Heterocephalus_glaber_male
ENSCAPG00000003300	SCAF8	86	99.561	ENSSTOG00000026043	SCAF8	65	99.569	Ictidomys_tridecemlineatus
ENSCAPG00000003300	SCAF8	87	97.368	ENSJJAG00000020480	Scaf8	65	97.414	Jaculus_jaculus
ENSCAPG00000003300	SCAF8	71	69.231	ENSKMAG00000012767	SCAF8	58	70.667	Kryptolebias_marmoratus
ENSCAPG00000003300	SCAF8	80	66.667	ENSLACG00000001394	SCAF8	70	66.667	Latimeria_chalumnae
ENSCAPG00000003300	SCAF8	81	77.826	ENSLOCG00000016856	SCAF8	66	77.778	Lepisosteus_oculatus
ENSCAPG00000003300	SCAF8	86	96.943	ENSLAFG00000000022	SCAF8	65	96.996	Loxodonta_africana
ENSCAPG00000003300	SCAF8	86	98.684	ENSMFAG00000032738	SCAF8	66	98.707	Macaca_fascicularis
ENSCAPG00000003300	SCAF8	86	98.684	ENSMMUG00000015163	SCAF8	65	98.707	Macaca_mulatta
ENSCAPG00000003300	SCAF8	86	98.684	ENSMNEG00000043466	SCAF8	66	98.707	Macaca_nemestrina
ENSCAPG00000003300	SCAF8	86	98.684	ENSMLEG00000034845	SCAF8	66	98.707	Mandrillus_leucophaeus
ENSCAPG00000003300	SCAF8	71	70.667	ENSMAMG00000009457	SCAF8	56	70.667	Mastacembelus_armatus
ENSCAPG00000003300	SCAF8	70	72.000	ENSMZEG00005005698	SCAF8	59	72.000	Maylandia_zebra
ENSCAPG00000003300	SCAF8	85	88.085	ENSMGAG00000012762	SCAF8	64	88.085	Meleagris_gallopavo
ENSCAPG00000003300	SCAF8	88	98.246	ENSMICG00000028965	SCAF8	65	98.276	Microcebus_murinus
ENSCAPG00000003300	SCAF8	87	96.930	ENSMOCG00000014950	Scaf8	67	96.983	Microtus_ochrogaster
ENSCAPG00000003300	SCAF8	71	70.667	ENSMMOG00000002216	SCAF8	55	70.667	Mola_mola
ENSCAPG00000003300	SCAF8	85	93.421	ENSMODG00000008301	SCAF8	64	93.534	Monodelphis_domestica
ENSCAPG00000003300	SCAF8	69	81.967	ENSMALG00000011584	SCAF8	57	81.967	Monopterus_albus
ENSCAPG00000003300	SCAF8	85	97.807	ENSMPUG00000001974	SCAF8	64	97.845	Mustela_putorius_furo
ENSCAPG00000003300	SCAF8	93	98.127	ENSMLUG00000029190	SCAF8	82	98.155	Myotis_lucifugus
ENSCAPG00000003300	SCAF8	85	98.246	ENSNGAG00000012332	Scaf8	65	98.276	Nannospalax_galili
ENSCAPG00000003300	SCAF8	81	72.000	ENSNBRG00000009067	SCAF8	66	72.000	Neolamprologus_brichardi
ENSCAPG00000003300	SCAF8	85	98.684	ENSNLEG00000015509	SCAF8	64	98.707	Nomascus_leucogenys
ENSCAPG00000003300	SCAF8	71	100.000	ENSOPRG00000018413	-	58	100.000	Ochotona_princeps
ENSCAPG00000003300	SCAF8	97	76.362	ENSODEG00000007296	SCAF8	75	100.000	Octodon_degus
ENSCAPG00000003300	SCAF8	77	75.319	ENSONIG00000008119	SCAF8	62	75.319	Oreochromis_niloticus
ENSCAPG00000003300	SCAF8	85	97.807	ENSOCUG00000026063	SCAF8	65	97.845	Oryctolagus_cuniculus
ENSCAPG00000003300	SCAF8	71	69.231	ENSORLG00020002214	SCAF8	58	70.667	Oryzias_latipes_hni
ENSCAPG00000003300	SCAF8	71	70.667	ENSOMEG00000015471	SCAF8	58	70.667	Oryzias_melastigma
ENSCAPG00000003300	SCAF8	85	96.053	ENSOGAG00000034223	SCAF8	62	96.121	Otolemur_garnettii
ENSCAPG00000003300	SCAF8	88	96.491	ENSOARG00000004159	SCAF8	66	96.552	Ovis_aries
ENSCAPG00000003300	SCAF8	85	98.684	ENSPPAG00000039826	SCAF8	79	70.370	Pan_paniscus
ENSCAPG00000003300	SCAF8	85	98.684	ENSPPRG00000023175	SCAF8	65	98.707	Panthera_pardus
ENSCAPG00000003300	SCAF8	85	98.684	ENSPTIG00000014836	SCAF8	66	98.707	Panthera_tigris_altaica
ENSCAPG00000003300	SCAF8	85	98.684	ENSPTRG00000018727	SCAF8	79	70.370	Pan_troglodytes
ENSCAPG00000003300	SCAF8	86	98.246	ENSPANG00000017489	SCAF8	66	97.414	Papio_anubis
ENSCAPG00000003300	SCAF8	78	88.158	ENSPSIG00000008614	SCAF8	56	88.362	Pelodiscus_sinensis
ENSCAPG00000003300	SCAF8	86	96.930	ENSPEMG00000010531	Scaf8	66	96.983	Peromyscus_maniculatus_bairdii
ENSCAPG00000003300	SCAF8	85	92.982	ENSPCIG00000001141	SCAF8	79	70.370	Phascolarctos_cinereus
ENSCAPG00000003300	SCAF8	77	75.319	ENSPFOG00000004176	SCAF8	59	75.319	Poecilia_formosa
ENSCAPG00000003300	SCAF8	71	69.231	ENSPLAG00000021432	SCAF8	58	70.667	Poecilia_latipinna
ENSCAPG00000003300	SCAF8	71	70.667	ENSPMEG00000007591	SCAF8	65	69.231	Poecilia_mexicana
ENSCAPG00000003300	SCAF8	71	70.667	ENSPREG00000000652	SCAF8	58	70.667	Poecilia_reticulata
ENSCAPG00000003300	SCAF8	87	98.701	ENSPPYG00000017121	SCAF8	65	98.701	Pongo_abelii
ENSCAPG00000003300	SCAF8	68	97.101	ENSPCAG00000013044	SCAF8	55	97.101	Procavia_capensis
ENSCAPG00000003300	SCAF8	100	74.201	ENSPCOG00000002067	SCAF8	65	98.707	Propithecus_coquereli
ENSCAPG00000003300	SCAF8	82	95.175	ENSPVAG00000005582	SCAF8	65	95.259	Pteropus_vampyrus
ENSCAPG00000003300	SCAF8	70	72.000	ENSPNYG00000007277	SCAF8	59	72.000	Pundamilia_nyererei
ENSCAPG00000003300	SCAF8	71	74.667	ENSPNAG00000024740	SCAF8	61	74.667	Pygocentrus_nattereri
ENSCAPG00000003300	SCAF8	86	98.246	ENSRBIG00000035769	SCAF8	66	98.276	Rhinopithecus_bieti
ENSCAPG00000003300	SCAF8	86	98.246	ENSRROG00000013580	SCAF8	66	98.276	Rhinopithecus_roxellana
ENSCAPG00000003300	SCAF8	86	97.807	ENSSBOG00000027023	SCAF8	65	97.845	Saimiri_boliviensis_boliviensis
ENSCAPG00000003300	SCAF8	85	92.544	ENSSHAG00000009915	SCAF8	64	92.672	Sarcophilus_harrisii
ENSCAPG00000003300	SCAF8	78	76.754	ENSSFOG00015009481	SCAF8	55	78.112	Scleropages_formosus
ENSCAPG00000003300	SCAF8	72	69.333	ENSSMAG00000008275	SCAF8	50	69.333	Scophthalmus_maximus
ENSCAPG00000003300	SCAF8	86	89.407	ENSSPUG00000015219	SCAF8	63	89.655	Sphenodon_punctatus
ENSCAPG00000003300	SCAF8	71	72.000	ENSSPAG00000019433	SCAF8	57	72.000	Stegastes_partitus
ENSCAPG00000003300	SCAF8	84	97.807	ENSSSCG00000004070	SCAF8	66	97.845	Sus_scrofa
ENSCAPG00000003300	SCAF8	88	70.370	ENSTGUG00000011151	SCAF8	79	70.370	Taeniopygia_guttata
ENSCAPG00000003300	SCAF8	71	70.667	ENSTRUG00000009243	SCAF8	54	70.667	Takifugu_rubripes
ENSCAPG00000003300	SCAF8	71	70.513	ENSTNIG00000016885	SCAF8	65	72.000	Tetraodon_nigroviridis
ENSCAPG00000003300	SCAF8	86	96.491	ENSTTRG00000014538	SCAF8	66	96.552	Tursiops_truncatus
ENSCAPG00000003300	SCAF8	85	97.807	ENSUAMG00000024736	SCAF8	65	97.845	Ursus_americanus
ENSCAPG00000003300	SCAF8	85	97.807	ENSUMAG00000013404	SCAF8	66	97.845	Ursus_maritimus
ENSCAPG00000003300	SCAF8	50	100.000	ENSVPAG00000012465	SCAF8	57	100.000	Vicugna_pacos
ENSCAPG00000003300	SCAF8	85	98.246	ENSVVUG00000007532	SCAF8	68	98.276	Vulpes_vulpes
ENSCAPG00000003300	SCAF8	85	83.607	ENSXETG00000013132	scaf8	61	81.116	Xenopus_tropicalis
ENSCAPG00000003300	SCAF8	71	69.231	ENSXMAG00000019192	SCAF8	58	70.667	Xiphophorus_maculatus