EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000003342 (Gene tree)
Gene ID: -
Gene Symbol: DKC1
Alias: Cbf5|DKC|NAP57|NOLA4|XAP101|dyskerin
Full Name: dyskerin pseudouridine synthase 1
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Minus strand
Length: 7166 bases
Position: chrAVPZ01000054.1:1081106-1088271
Accession: 2890
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000001677	TruB_N	PF01509.18	7.3e-22	1	1
ENSCAPP00000001670	TruB_N	PF01509.18	8.7e-22	1	1
ENSCAPP00000001677	PUA	PF01472.20	2.1e-18	1	1
ENSCAPP00000001670	PUA	PF01472.20	2.3e-18	1	1
ENSCAPP00000001670	DKCLD	PF08068.12	9.1e-27	1	1
ENSCAPP00000001677	DKCLD	PF08068.12	4.2e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000003847	DKC1-202	1317	-	ENSCAPP00000001677	439 (aa)	-	-
ENSCAPT00000003832	DKC1-201	1371	-	ENSCAPP00000001670	456 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000003342's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000003342's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000003342	DKC1	99	94.253	ENSG00000130826	DKC1	99	98.537	Homo_sapiens
ENSCAPG00000003342	DKC1	92	82.178	ENSAPOG00000007799	dkc1	79	81.572	Acanthochromis_polyacanthus
ENSCAPG00000003342	DKC1	91	94.264	ENSAMEG00000002776	DKC1	85	91.224	Ailuropoda_melanoleuca
ENSCAPG00000003342	DKC1	95	76.888	ENSACIG00000022614	dkc1	81	83.590	Amphilophus_citrinellus
ENSCAPG00000003342	DKC1	98	78.161	ENSAOCG00000013159	dkc1	74	87.845	Amphiprion_ocellaris
ENSCAPG00000003342	DKC1	98	78.161	ENSAPEG00000002284	dkc1	87	78.391	Amphiprion_percula
ENSCAPG00000003342	DKC1	84	85.638	ENSATEG00000013682	dkc1	74	85.638	Anabas_testudineus
ENSCAPG00000003342	DKC1	90	85.894	ENSACAG00000015600	DKC1	68	85.894	Anolis_carolinensis
ENSCAPG00000003342	DKC1	99	92.184	ENSANAG00000022732	DKC1	85	92.184	Aotus_nancymaae
ENSCAPG00000003342	DKC1	82	88.398	ENSACLG00000015605	dkc1	74	88.398	Astatotilapia_calliptera
ENSCAPG00000003342	DKC1	93	81.265	ENSAMXG00000017108	dkc1	73	88.011	Astyanax_mexicanus
ENSCAPG00000003342	DKC1	92	93.596	ENSBTAG00000013045	DKC1	81	93.154	Bos_taurus
ENSCAPG00000003342	DKC1	84	69.106	WBGene00010478	K01G5.5	91	64.851	Caenorhabditis_elegans
ENSCAPG00000003342	DKC1	99	93.119	ENSCJAG00000004210	DKC1	85	93.119	Callithrix_jacchus
ENSCAPG00000003342	DKC1	91	82.836	ENSCAFG00000009311	-	81	80.918	Canis_familiaris
ENSCAPG00000003342	DKC1	91	92.892	ENSCAFG00000019620	-	86	88.514	Canis_familiaris
ENSCAPG00000003342	DKC1	91	92.892	ENSCAFG00020008918	-	86	88.514	Canis_lupus_dingo
ENSCAPG00000003342	DKC1	91	82.663	ENSCAFG00020009379	-	77	80.732	Canis_lupus_dingo
ENSCAPG00000003342	DKC1	92	93.333	ENSCHIG00000017392	DKC1	81	92.665	Capra_hircus
ENSCAPG00000003342	DKC1	99	91.461	ENSTSYG00000007681	DKC1	85	91.461	Carlito_syrichta
ENSCAPG00000003342	DKC1	99	96.552	ENSCPOG00000008825	DKC1	85	96.552	Cavia_porcellus
ENSCAPG00000003342	DKC1	99	83.678	ENSCCAG00000027418	DKC1	87	80.310	Cebus_capucinus
ENSCAPG00000003342	DKC1	99	93.333	ENSCATG00000033602	DKC1	85	93.333	Cercocebus_atys
ENSCAPG00000003342	DKC1	99	97.465	ENSCLAG00000000720	DKC1	86	97.465	Chinchilla_lanigera
ENSCAPG00000003342	DKC1	99	93.563	ENSCSAG00000006706	DKC1	85	93.563	Chlorocebus_sabaeus
ENSCAPG00000003342	DKC1	92	86.173	ENSCPBG00000005858	DKC1	81	89.947	Chrysemys_picta_bellii
ENSCAPG00000003342	DKC1	92	74.321	ENSCING00000004599	-	77	74.572	Ciona_intestinalis
ENSCAPG00000003342	DKC1	83	81.818	ENSCSAVG00000010047	-	89	76.179	Ciona_savignyi
ENSCAPG00000003342	DKC1	99	93.563	ENSCANG00000027987	DKC1	85	93.563	Colobus_angolensis_palliatus
ENSCAPG00000003342	DKC1	99	92.184	ENSCGRG00001014574	-	85	92.184	Cricetulus_griseus_chok1gshd
ENSCAPG00000003342	DKC1	99	65.589	ENSCGRG00001016789	-	89	64.045	Cricetulus_griseus_chok1gshd
ENSCAPG00000003342	DKC1	99	92.184	ENSCGRG00000016075	-	85	92.184	Cricetulus_griseus_crigri
ENSCAPG00000003342	DKC1	99	65.127	ENSCGRG00000014809	-	88	63.839	Cricetulus_griseus_crigri
ENSCAPG00000003342	DKC1	85	85.224	ENSCSEG00000012633	dkc1	87	80.000	Cynoglossus_semilaevis
ENSCAPG00000003342	DKC1	83	88.154	ENSCVAG00000010155	dkc1	78	80.835	Cyprinodon_variegatus
ENSCAPG00000003342	DKC1	84	86.992	ENSDARG00000016484	dkc1	74	86.327	Danio_rerio
ENSCAPG00000003342	DKC1	98	93.318	ENSDNOG00000004218	DKC1	85	93.318	Dasypus_novemcinctus
ENSCAPG00000003342	DKC1	55	82.716	ENSDORG00000013566	-	82	79.921	Dipodomys_ordii
ENSCAPG00000003342	DKC1	92	70.471	FBgn0259937	Nop60B	79	69.853	Drosophila_melanogaster
ENSCAPG00000003342	DKC1	92	87.531	ENSETEG00000016095	DKC1	83	87.715	Echinops_telfairi
ENSCAPG00000003342	DKC1	66	82.353	ENSEBUG00000015962	dkc1	98	82.353	Eptatretus_burgeri
ENSCAPG00000003342	DKC1	98	90.045	ENSEASG00005007484	DKC1	85	90.045	Equus_asinus_asinus
ENSCAPG00000003342	DKC1	99	89.485	ENSECAG00000023524	DKC1	85	90.045	Equus_caballus
ENSCAPG00000003342	DKC1	91	91.206	ENSEEUG00000003323	DKC1	95	90.323	Erinaceus_europaeus
ENSCAPG00000003342	DKC1	84	87.772	ENSELUG00000014538	dkc1	83	80.488	Esox_lucius
ENSCAPG00000003342	DKC1	99	92.148	ENSFCAG00000006577	DKC1	85	91.455	Felis_catus
ENSCAPG00000003342	DKC1	91	83.538	ENSFALG00000011496	DKC1	79	82.536	Ficedula_albicollis
ENSCAPG00000003342	DKC1	99	95.862	ENSFDAG00000002516	DKC1	85	95.862	Fukomys_damarensis
ENSCAPG00000003342	DKC1	92	81.436	ENSFHEG00000004627	dkc1	80	81.327	Fundulus_heteroclitus
ENSCAPG00000003342	DKC1	82	87.845	ENSGMOG00000017277	dkc1	93	87.845	Gadus_morhua
ENSCAPG00000003342	DKC1	90	86.650	ENSGALG00000005054	DKC1	79	84.672	Gallus_gallus
ENSCAPG00000003342	DKC1	91	82.587	ENSGAFG00000011486	dkc1	68	81.818	Gambusia_affinis
ENSCAPG00000003342	DKC1	82	88.398	ENSGACG00000004373	dkc1	97	88.822	Gasterosteus_aculeatus
ENSCAPG00000003342	DKC1	92	86.173	ENSGAGG00000011330	DKC1	78	86.797	Gopherus_agassizii
ENSCAPG00000003342	DKC1	99	94.253	ENSGGOG00000001045	DKC1	85	94.253	Gorilla_gorilla
ENSCAPG00000003342	DKC1	92	81.188	ENSHBUG00000012436	dkc1	80	80.929	Haplochromis_burtoni
ENSCAPG00000003342	DKC1	99	92.694	ENSHGLG00000000649	DKC1	85	92.922	Heterocephalus_glaber_female
ENSCAPG00000003342	DKC1	99	92.694	ENSHGLG00100001153	DKC1	86	92.922	Heterocephalus_glaber_male
ENSCAPG00000003342	DKC1	82	87.845	ENSHCOG00000021099	dkc1	78	81.796	Hippocampus_comes
ENSCAPG00000003342	DKC1	91	82.294	ENSIPUG00000010309	dkc1	77	82.294	Ictalurus_punctatus
ENSCAPG00000003342	DKC1	99	83.448	ENSSTOG00000020149	-	89	79.130	Ictidomys_tridecemlineatus
ENSCAPG00000003342	DKC1	92	94.377	ENSSTOG00000001074	-	84	94.595	Ictidomys_tridecemlineatus
ENSCAPG00000003342	DKC1	99	81.465	ENSSTOG00000011904	-	84	78.587	Ictidomys_tridecemlineatus
ENSCAPG00000003342	DKC1	55	83.539	ENSJJAG00000010086	-	83	80.709	Jaculus_jaculus
ENSCAPG00000003342	DKC1	92	80.597	ENSKMAG00000008010	dkc1	80	79.607	Kryptolebias_marmoratus
ENSCAPG00000003342	DKC1	92	80.941	ENSLBEG00000019122	dkc1	82	80.590	Labrus_bergylta
ENSCAPG00000003342	DKC1	93	82.367	ENSLACG00000014025	DKC1	83	88.798	Latimeria_chalumnae
ENSCAPG00000003342	DKC1	92	84.352	ENSLOCG00000013713	dkc1	82	84.864	Lepisosteus_oculatus
ENSCAPG00000003342	DKC1	98	92.184	ENSLAFG00000000221	DKC1	85	92.184	Loxodonta_africana
ENSCAPG00000003342	DKC1	99	93.333	ENSMFAG00000032398	DKC1	73	93.333	Macaca_fascicularis
ENSCAPG00000003342	DKC1	99	93.563	ENSMMUG00000005768	DKC1	85	93.563	Macaca_mulatta
ENSCAPG00000003342	DKC1	99	93.563	ENSMNEG00000034503	DKC1	85	93.563	Macaca_nemestrina
ENSCAPG00000003342	DKC1	99	93.563	ENSMLEG00000034422	DKC1	85	93.563	Mandrillus_leucophaeus
ENSCAPG00000003342	DKC1	84	87.772	ENSMAMG00000005427	dkc1	83	87.097	Mastacembelus_armatus
ENSCAPG00000003342	DKC1	92	81.436	ENSMZEG00005014503	dkc1	80	81.174	Maylandia_zebra
ENSCAPG00000003342	DKC1	90	86.398	ENSMGAG00000009238	DKC1	87	85.396	Meleagris_gallopavo
ENSCAPG00000003342	DKC1	55	83.128	ENSMAUG00000016454	-	82	80.315	Mesocricetus_auratus
ENSCAPG00000003342	DKC1	99	84.174	ENSMICG00000002818	-	98	83.471	Microcebus_murinus
ENSCAPG00000003342	DKC1	99	91.591	ENSMICG00000038751	-	88	88.764	Microcebus_murinus
ENSCAPG00000003342	DKC1	55	79.835	ENSMOCG00000001169	-	82	77.165	Microtus_ochrogaster
ENSCAPG00000003342	DKC1	82	88.122	ENSMMOG00000020348	dkc1	80	87.432	Mola_mola
ENSCAPG00000003342	DKC1	90	87.909	ENSMODG00000009243	DKC1	65	91.755	Monodelphis_domestica
ENSCAPG00000003342	DKC1	85	86.096	ENSMALG00000009454	dkc1	89	76.000	Monopterus_albus
ENSCAPG00000003342	DKC1	99	79.864	MGP_CAROLIEiJ_G0033191	Dkc1	87	77.024	Mus_caroli
ENSCAPG00000003342	DKC1	99	91.034	ENSMUSG00000031403	Dkc1	88	87.973	Mus_musculus
ENSCAPG00000003342	DKC1	99	90.345	MGP_PahariEiJ_G0031735	Dkc1	88	87.832	Mus_pahari
ENSCAPG00000003342	DKC1	99	91.034	MGP_SPRETEiJ_G0034351	Dkc1	85	91.264	Mus_spretus
ENSCAPG00000003342	DKC1	91	92.176	ENSMPUG00000016136	DKC1	77	91.283	Mustela_putorius_furo
ENSCAPG00000003342	DKC1	91	88.308	ENSMLUG00000011918	DKC1	78	87.469	Myotis_lucifugus
ENSCAPG00000003342	DKC1	55	83.539	ENSNGAG00000015724	-	83	80.709	Nannospalax_galili
ENSCAPG00000003342	DKC1	82	88.950	ENSNBRG00000005638	dkc1	74	88.251	Neolamprologus_brichardi
ENSCAPG00000003342	DKC1	99	94.023	ENSNLEG00000014323	DKC1	85	94.023	Nomascus_leucogenys
ENSCAPG00000003342	DKC1	86	87.402	ENSMEUG00000001066	DKC1	84	86.753	Notamacropus_eugenii
ENSCAPG00000003342	DKC1	65	99.296	ENSOPRG00000005248	DKC1	57	99.296	Ochotona_princeps
ENSCAPG00000003342	DKC1	86	97.098	ENSODEG00000011816	-	84	91.860	Octodon_degus
ENSCAPG00000003342	DKC1	55	83.539	ENSODEG00000000549	-	82	80.709	Octodon_degus
ENSCAPG00000003342	DKC1	92	81.418	ENSONIG00000013889	dkc1	79	81.818	Oreochromis_niloticus
ENSCAPG00000003342	DKC1	66	65.563	ENSOANG00000022295	-	84	65.563	Ornithorhynchus_anatinus
ENSCAPG00000003342	DKC1	92	89.630	ENSOANG00000008713	-	84	88.780	Ornithorhynchus_anatinus
ENSCAPG00000003342	DKC1	99	92.874	ENSOCUG00000012646	DKC1	88	89.333	Oryctolagus_cuniculus
ENSCAPG00000003342	DKC1	84	87.193	ENSORLG00000018748	dkc1	72	87.432	Oryzias_latipes
ENSCAPG00000003342	DKC1	85	86.096	ENSOMEG00000005786	dkc1	72	88.995	Oryzias_melastigma
ENSCAPG00000003342	DKC1	99	89.663	ENSOGAG00000003399	DKC1	85	89.663	Otolemur_garnettii
ENSCAPG00000003342	DKC1	92	93.333	ENSOARG00000003047	DKC1	81	92.665	Ovis_aries
ENSCAPG00000003342	DKC1	99	93.563	ENSPPAG00000023820	DKC1	85	93.793	Pan_paniscus
ENSCAPG00000003342	DKC1	92	94.089	ENSPPRG00000009104	DKC1	88	88.591	Panthera_pardus
ENSCAPG00000003342	DKC1	92	92.118	ENSPTIG00000017469	DKC1	88	86.801	Panthera_tigris_altaica
ENSCAPG00000003342	DKC1	99	94.253	ENSPTRG00000022449	DKC1	85	94.253	Pan_troglodytes
ENSCAPG00000003342	DKC1	99	94.253	ENSPTRG00000043416	-	74	94.253	Pan_troglodytes
ENSCAPG00000003342	DKC1	99	93.563	ENSPANG00000011978	DKC1	85	93.563	Papio_anubis
ENSCAPG00000003342	DKC1	83	89.532	ENSPKIG00000008443	dkc1	77	89.503	Paramormyrops_kingsleyae
ENSCAPG00000003342	DKC1	75	93.617	ENSPSIG00000013765	DKC1	80	92.793	Pelodiscus_sinensis
ENSCAPG00000003342	DKC1	92	76.271	ENSPMGG00000004097	dkc1	76	76.271	Periophthalmus_magnuspinnatus
ENSCAPG00000003342	DKC1	99	53.547	ENSPEMG00000013348	Dkc1	81	99.275	Peromyscus_maniculatus_bairdii
ENSCAPG00000003342	DKC1	86	92.287	ENSPCIG00000016706	DKC1	68	88.279	Phascolarctos_cinereus
ENSCAPG00000003342	DKC1	91	82.836	ENSPFOG00000018653	dkc1	79	82.064	Poecilia_formosa
ENSCAPG00000003342	DKC1	91	82.836	ENSPLAG00000003272	dkc1	71	82.064	Poecilia_latipinna
ENSCAPG00000003342	DKC1	91	82.836	ENSPMEG00000010413	dkc1	79	82.064	Poecilia_mexicana
ENSCAPG00000003342	DKC1	91	82.836	ENSPREG00000004100	dkc1	72	87.978	Poecilia_reticulata
ENSCAPG00000003342	DKC1	99	94.253	ENSPPYG00000020892	DKC1	85	94.253	Pongo_abelii
ENSCAPG00000003342	DKC1	85	93.850	ENSPCAG00000015034	DKC1	73	93.850	Procavia_capensis
ENSCAPG00000003342	DKC1	99	93.333	ENSPCOG00000026874	DKC1	85	93.333	Propithecus_coquereli
ENSCAPG00000003342	DKC1	99	89.631	ENSPVAG00000009222	DKC1	84	90.323	Pteropus_vampyrus
ENSCAPG00000003342	DKC1	92	80.685	ENSPNYG00000020063	dkc1	82	79.856	Pundamilia_nyererei
ENSCAPG00000003342	DKC1	91	83.000	ENSPNAG00000005780	dkc1	74	87.027	Pygocentrus_nattereri
ENSCAPG00000003342	DKC1	99	83.028	ENSRNOG00000055562	Dkc1	80	86.241	Rattus_norvegicus
ENSCAPG00000003342	DKC1	99	93.563	ENSRBIG00000028457	DKC1	73	93.563	Rhinopithecus_bieti
ENSCAPG00000003342	DKC1	99	93.563	ENSRROG00000044780	DKC1	85	93.563	Rhinopithecus_roxellana
ENSCAPG00000003342	DKC1	85	69.437	YLR175W	-	84	66.089	Saccharomyces_cerevisiae
ENSCAPG00000003342	DKC1	99	93.563	ENSSBOG00000033746	DKC1	88	89.845	Saimiri_boliviensis_boliviensis
ENSCAPG00000003342	DKC1	92	87.160	ENSSHAG00000002463	DKC1	86	87.192	Sarcophilus_harrisii
ENSCAPG00000003342	DKC1	93	81.863	ENSSFOG00015009585	dkc1	79	82.195	Scleropages_formosus
ENSCAPG00000003342	DKC1	92	81.436	ENSSMAG00000002552	dkc1	77	85.340	Scophthalmus_maximus
ENSCAPG00000003342	DKC1	85	87.433	ENSSDUG00000009963	dkc1	75	87.433	Seriola_dumerili
ENSCAPG00000003342	DKC1	86	86.772	ENSSLDG00000019342	dkc1	82	83.417	Seriola_lalandi_dorsalis
ENSCAPG00000003342	DKC1	99	83.141	ENSSARG00000001822	DKC1	89	80.401	Sorex_araneus
ENSCAPG00000003342	DKC1	84	91.057	ENSSPUG00000018907	DKC1	79	83.816	Sphenodon_punctatus
ENSCAPG00000003342	DKC1	91	81.796	ENSSPAG00000002585	dkc1	76	81.034	Stegastes_partitus
ENSCAPG00000003342	DKC1	99	89.640	ENSSSCG00000012823	DKC1	84	92.346	Sus_scrofa
ENSCAPG00000003342	DKC1	91	85.037	ENSTGUG00000006781	DKC1	89	85.250	Taeniopygia_guttata
ENSCAPG00000003342	DKC1	83	88.430	ENSTRUG00000004413	dkc1	74	87.738	Takifugu_rubripes
ENSCAPG00000003342	DKC1	97	63.134	ENSTNIG00000002582	dkc1	81	64.407	Tetraodon_nigroviridis
ENSCAPG00000003342	DKC1	77	90.643	ENSTBEG00000011262	DKC1	94	90.643	Tupaia_belangeri
ENSCAPG00000003342	DKC1	56	100.000	ENSTTRG00000008089	DKC1	50	98.810	Tursiops_truncatus
ENSCAPG00000003342	DKC1	100	89.310	ENSUAMG00000022721	DKC1	83	94.924	Ursus_americanus
ENSCAPG00000003342	DKC1	100	88.864	ENSUMAG00000016899	DKC1	96	92.347	Ursus_maritimus
ENSCAPG00000003342	DKC1	91	91.566	ENSVVUG00000020734	-	78	87.361	Vulpes_vulpes
ENSCAPG00000003342	DKC1	95	74.537	ENSVVUG00000021671	-	82	72.973	Vulpes_vulpes
ENSCAPG00000003342	DKC1	97	81.132	ENSXETG00000032517	DKC1	76	86.842	Xenopus_tropicalis
ENSCAPG00000003342	DKC1	91	82.382	ENSXCOG00000005498	dkc1	84	82.382	Xiphophorus_couchianus
ENSCAPG00000003342	DKC1	91	82.338	ENSXMAG00000004919	dkc1	74	87.263	Xiphophorus_maculatus