EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000003355 (Gene tree)
Gene ID: -
Gene Symbol: TRMT1
Alias: FLJ20244|TRM1
Full Name: tRNA methyltransferase 1
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 10194 bases
Position: chrAVPZ01000367.1:13187900-13198093
Accession: 25980
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000001684	TRM	PF02005.16	6.3e-135	1	1
ENSCAPP00000001685	TRM	PF02005.16	3.1e-126	1	1
ENSCAPP00000001685	Met_10	PF02475.16	2.3e-07	1	1
ENSCAPP00000001684	Met_10	PF02475.16	2.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000003867	TRMT1-202	1551	-	ENSCAPP00000001685	516 (aa)	-	-
ENSCAPT00000003866	TRMT1-201	1638	-	ENSCAPP00000001684	545 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000003355's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000003355's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000003355	TRMT1	97	81.214	ENSG00000104907	TRMT1	100	89.529	Homo_sapiens
ENSCAPG00000003355	TRMT1	99	80.000	ENSAMEG00000012598	TRMT1	84	80.000	Ailuropoda_melanoleuca
ENSCAPG00000003355	TRMT1	94	54.409	ENSACIG00000018680	trmt1	81	54.409	Amphilophus_citrinellus
ENSCAPG00000003355	TRMT1	94	62.406	ENSAOCG00000006781	trmt1	79	62.406	Amphiprion_ocellaris
ENSCAPG00000003355	TRMT1	94	62.477	ENSAPEG00000007712	trmt1	79	62.477	Amphiprion_percula
ENSCAPG00000003355	TRMT1	94	63.722	ENSATEG00000001872	trmt1	78	63.722	Anabas_testudineus
ENSCAPG00000003355	TRMT1	94	64.850	ENSACAG00000003825	TRMT1	86	64.850	Anolis_carolinensis
ENSCAPG00000003355	TRMT1	99	77.289	ENSANAG00000023016	TRMT1	91	77.289	Aotus_nancymaae
ENSCAPG00000003355	TRMT1	94	59.850	ENSACLG00000010073	trmt1	86	59.850	Astatotilapia_calliptera
ENSCAPG00000003355	TRMT1	96	62.088	ENSAMXG00000012026	trmt1	81	62.088	Astyanax_mexicanus
ENSCAPG00000003355	TRMT1	97	80.357	ENSBTAG00000019325	TRMT1	79	80.357	Bos_taurus
ENSCAPG00000003355	TRMT1	81	42.291	WBGene00006613	trm-1	85	42.291	Caenorhabditis_elegans
ENSCAPG00000003355	TRMT1	99	75.696	ENSCJAG00000004566	TRMT1	87	75.528	Callithrix_jacchus
ENSCAPG00000003355	TRMT1	98	79.893	ENSCAFG00000017070	TRMT1	88	79.893	Canis_familiaris
ENSCAPG00000003355	TRMT1	98	79.925	ENSCAFG00020005397	TRMT1	91	77.379	Canis_lupus_dingo
ENSCAPG00000003355	TRMT1	99	79.613	ENSCHIG00000013569	TRMT1	85	79.613	Capra_hircus
ENSCAPG00000003355	TRMT1	97	75.090	ENSTSYG00000003207	TRMT1	86	74.776	Carlito_syrichta
ENSCAPG00000003355	TRMT1	100	93.310	ENSCPOG00000011754	TRMT1	86	93.310	Cavia_porcellus
ENSCAPG00000003355	TRMT1	99	77.196	ENSCCAG00000022263	TRMT1	91	76.720	Cebus_capucinus
ENSCAPG00000003355	TRMT1	98	81.105	ENSCATG00000039850	TRMT1	85	81.105	Cercocebus_atys
ENSCAPG00000003355	TRMT1	98	62.082	ENSCATG00000038220	-	89	62.082	Cercocebus_atys
ENSCAPG00000003355	TRMT1	98	85.225	ENSCLAG00000015295	TRMT1	87	81.408	Chinchilla_lanigera
ENSCAPG00000003355	TRMT1	80	87.900	ENSCSAG00000006500	TRMT1	83	87.900	Chlorocebus_sabaeus
ENSCAPG00000003355	TRMT1	88	71.726	ENSCPBG00000023866	TRMT1	72	71.933	Chrysemys_picta_bellii
ENSCAPG00000003355	TRMT1	85	47.009	ENSCING00000002884	-	80	47.009	Ciona_intestinalis
ENSCAPG00000003355	TRMT1	84	46.943	ENSCSAVG00000010927	-	85	46.943	Ciona_savignyi
ENSCAPG00000003355	TRMT1	97	62.050	ENSCANG00000031650	-	88	62.032	Colobus_angolensis_palliatus
ENSCAPG00000003355	TRMT1	98	62.811	ENSCANG00000040631	TRMT1	85	62.811	Colobus_angolensis_palliatus
ENSCAPG00000003355	TRMT1	98	78.636	ENSCGRG00001022594	Trmt1	85	78.636	Cricetulus_griseus_chok1gshd
ENSCAPG00000003355	TRMT1	98	78.636	ENSCGRG00000017732	Trmt1	84	78.636	Cricetulus_griseus_crigri
ENSCAPG00000003355	TRMT1	94	61.132	ENSCSEG00000001643	trmt1	78	65.199	Cynoglossus_semilaevis
ENSCAPG00000003355	TRMT1	94	63.277	ENSCVAG00000011886	trmt1	80	63.277	Cyprinodon_variegatus
ENSCAPG00000003355	TRMT1	94	61.029	ENSDARG00000010978	trmt1	80	61.524	Danio_rerio
ENSCAPG00000003355	TRMT1	96	53.526	ENSDNOG00000048240	-	94	53.526	Dasypus_novemcinctus
ENSCAPG00000003355	TRMT1	98	77.061	ENSDORG00000014298	Trmt1	84	77.061	Dipodomys_ordii
ENSCAPG00000003355	TRMT1	82	49.336	FBgn0032430	CG6388	78	49.336	Drosophila_melanogaster
ENSCAPG00000003355	TRMT1	76	57.729	ENSEBUG00000003449	trmt1	66	58.398	Eptatretus_burgeri
ENSCAPG00000003355	TRMT1	97	78.995	ENSEASG00005004050	TRMT1	88	78.648	Equus_asinus_asinus
ENSCAPG00000003355	TRMT1	97	79.174	ENSECAG00000016149	TRMT1	88	78.826	Equus_caballus
ENSCAPG00000003355	TRMT1	65	72.191	ENSEEUG00000014102	-	90	72.191	Erinaceus_europaeus
ENSCAPG00000003355	TRMT1	94	60.561	ENSELUG00000021659	trmt1	80	60.561	Esox_lucius
ENSCAPG00000003355	TRMT1	98	79.181	ENSFCAG00000000483	TRMT1	85	79.181	Felis_catus
ENSCAPG00000003355	TRMT1	97	83.142	ENSFDAG00000007386	TRMT1	83	83.142	Fukomys_damarensis
ENSCAPG00000003355	TRMT1	88	68.410	ENSFHEG00000012865	trmt1	79	68.201	Fundulus_heteroclitus
ENSCAPG00000003355	TRMT1	94	55.955	ENSGMOG00000006564	trmt1	91	55.955	Gadus_morhua
ENSCAPG00000003355	TRMT1	94	63.653	ENSGAFG00000011862	trmt1	82	63.653	Gambusia_affinis
ENSCAPG00000003355	TRMT1	94	60.113	ENSGACG00000000227	trmt1	85	60.452	Gasterosteus_aculeatus
ENSCAPG00000003355	TRMT1	88	72.199	ENSGAGG00000016432	TRMT1	72	72.199	Gopherus_agassizii
ENSCAPG00000003355	TRMT1	97	81.594	ENSGGOG00000014007	TRMT1	85	80.927	Gorilla_gorilla
ENSCAPG00000003355	TRMT1	84	60.738	ENSHBUG00000008821	trmt1	80	60.738	Haplochromis_burtoni
ENSCAPG00000003355	TRMT1	99	82.888	ENSHGLG00000015972	TRMT1	85	82.888	Heterocephalus_glaber_female
ENSCAPG00000003355	TRMT1	99	79.256	ENSHGLG00100018112	TRMT1	85	78.558	Heterocephalus_glaber_male
ENSCAPG00000003355	TRMT1	94	59.735	ENSHCOG00000009447	trmt1	82	59.735	Hippocampus_comes
ENSCAPG00000003355	TRMT1	94	61.581	ENSIPUG00000002899	trmt1	79	62.362	Ictalurus_punctatus
ENSCAPG00000003355	TRMT1	97	82.971	ENSSTOG00000012531	TRMT1	85	82.971	Ictidomys_tridecemlineatus
ENSCAPG00000003355	TRMT1	97	78.018	ENSJJAG00000017154	Trmt1	86	77.679	Jaculus_jaculus
ENSCAPG00000003355	TRMT1	94	64.272	ENSKMAG00000011809	trmt1	88	63.327	Kryptolebias_marmoratus
ENSCAPG00000003355	TRMT1	94	61.538	ENSLBEG00000012703	trmt1	78	61.538	Labrus_bergylta
ENSCAPG00000003355	TRMT1	94	53.933	ENSLACG00000014585	TRMT1	86	53.846	Latimeria_chalumnae
ENSCAPG00000003355	TRMT1	94	60.037	ENSLOCG00000006479	trmt1	90	61.272	Lepisosteus_oculatus
ENSCAPG00000003355	TRMT1	96	80.874	ENSLAFG00000014072	TRMT1	84	80.874	Loxodonta_africana
ENSCAPG00000003355	TRMT1	98	80.927	ENSMFAG00000033143	TRMT1	85	80.927	Macaca_fascicularis
ENSCAPG00000003355	TRMT1	98	83.883	ENSMMUG00000001167	TRMT1	85	83.883	Macaca_mulatta
ENSCAPG00000003355	TRMT1	98	80.927	ENSMNEG00000037867	TRMT1	85	80.927	Macaca_nemestrina
ENSCAPG00000003355	TRMT1	98	81.203	ENSMLEG00000016142	TRMT1	85	81.203	Mandrillus_leucophaeus
ENSCAPG00000003355	TRMT1	94	62.642	ENSMAMG00000004357	trmt1	79	62.642	Mastacembelus_armatus
ENSCAPG00000003355	TRMT1	94	60.413	ENSMZEG00005014510	trmt1	79	60.413	Maylandia_zebra
ENSCAPG00000003355	TRMT1	97	78.409	ENSMAUG00000011134	Trmt1	87	76.389	Mesocricetus_auratus
ENSCAPG00000003355	TRMT1	98	81.673	ENSMICG00000000793	TRMT1	85	81.673	Microcebus_murinus
ENSCAPG00000003355	TRMT1	97	78.947	ENSMOCG00000015895	Trmt1	83	78.947	Microtus_ochrogaster
ENSCAPG00000003355	TRMT1	94	62.121	ENSMMOG00000011097	trmt1	85	62.121	Mola_mola
ENSCAPG00000003355	TRMT1	95	72.744	ENSMODG00000011619	TRMT1	88	72.744	Monodelphis_domestica
ENSCAPG00000003355	TRMT1	98	79.849	MGP_CAROLIEiJ_G0031304	Trmt1	85	79.643	Mus_caroli
ENSCAPG00000003355	TRMT1	98	79.096	ENSMUSG00000001909	Trmt1	85	78.929	Mus_musculus
ENSCAPG00000003355	TRMT1	98	78.908	MGP_SPRETEiJ_G0032422	Trmt1	85	78.750	Mus_spretus
ENSCAPG00000003355	TRMT1	98	80.249	ENSMPUG00000004210	TRMT1	81	80.249	Mustela_putorius_furo
ENSCAPG00000003355	TRMT1	99	79.469	ENSMLUG00000012809	TRMT1	84	79.469	Myotis_lucifugus
ENSCAPG00000003355	TRMT1	98	79.096	ENSNGAG00000022486	Trmt1	84	79.096	Nannospalax_galili
ENSCAPG00000003355	TRMT1	80	64.134	ENSNBRG00000024376	trmt1	78	64.134	Neolamprologus_brichardi
ENSCAPG00000003355	TRMT1	79	88.400	ENSNLEG00000013019	-	82	88.400	Nomascus_leucogenys
ENSCAPG00000003355	TRMT1	95	73.458	ENSMEUG00000013756	TRMT1	91	73.458	Notamacropus_eugenii
ENSCAPG00000003355	TRMT1	73	78.538	ENSOPRG00000009471	-	65	78.538	Ochotona_princeps
ENSCAPG00000003355	TRMT1	99	83.779	ENSODEG00000010323	TRMT1	85	83.779	Octodon_degus
ENSCAPG00000003355	TRMT1	94	62.664	ENSONIG00000000400	trmt1	85	62.664	Oreochromis_niloticus
ENSCAPG00000003355	TRMT1	80	87.900	ENSOCUG00000021934	TRMT1	83	87.900	Oryctolagus_cuniculus
ENSCAPG00000003355	TRMT1	94	57.974	ENSORLG00000020074	trmt1	84	57.856	Oryzias_latipes
ENSCAPG00000003355	TRMT1	94	61.205	ENSORLG00020007561	trmt1	84	60.829	Oryzias_latipes_hni
ENSCAPG00000003355	TRMT1	94	61.205	ENSORLG00015006547	trmt1	81	61.205	Oryzias_latipes_hsok
ENSCAPG00000003355	TRMT1	94	61.914	ENSOMEG00000019343	trmt1	81	61.914	Oryzias_melastigma
ENSCAPG00000003355	TRMT1	97	78.881	ENSOGAG00000025576	TRMT1	87	78.881	Otolemur_garnettii
ENSCAPG00000003355	TRMT1	97	65.607	ENSOARG00000009397	TRMT1	78	64.964	Ovis_aries
ENSCAPG00000003355	TRMT1	98	71.174	ENSPPRG00000012117	TRMT1	85	71.174	Panthera_pardus
ENSCAPG00000003355	TRMT1	77	88.446	ENSPTIG00000008833	TRMT1	80	88.755	Panthera_tigris_altaica
ENSCAPG00000003355	TRMT1	97	81.404	ENSPTRG00000010557	TRMT1	85	80.749	Pan_troglodytes
ENSCAPG00000003355	TRMT1	99	62.923	ENSPTRG00000050421	-	89	62.923	Pan_troglodytes
ENSCAPG00000003355	TRMT1	98	81.391	ENSPANG00000009247	TRMT1	85	80.927	Papio_anubis
ENSCAPG00000003355	TRMT1	77	72.038	ENSPANG00000034058	-	74	72.038	Papio_anubis
ENSCAPG00000003355	TRMT1	94	63.327	ENSPKIG00000005309	trmt1	78	63.327	Paramormyrops_kingsleyae
ENSCAPG00000003355	TRMT1	88	59.298	ENSPSIG00000008762	TRMT1	69	59.298	Pelodiscus_sinensis
ENSCAPG00000003355	TRMT1	94	62.049	ENSPMGG00000019764	trmt1	84	62.049	Periophthalmus_magnuspinnatus
ENSCAPG00000003355	TRMT1	97	79.810	ENSPEMG00000016247	Trmt1	83	79.422	Peromyscus_maniculatus_bairdii
ENSCAPG00000003355	TRMT1	97	56.624	ENSPMAG00000004329	trmt1	86	56.624	Petromyzon_marinus
ENSCAPG00000003355	TRMT1	95	73.371	ENSPCIG00000019273	TRMT1	83	73.371	Phascolarctos_cinereus
ENSCAPG00000003355	TRMT1	94	64.595	ENSPFOG00000008527	trmt1	82	64.595	Poecilia_formosa
ENSCAPG00000003355	TRMT1	94	65.267	ENSPLAG00000018788	trmt1	81	68.737	Poecilia_latipinna
ENSCAPG00000003355	TRMT1	94	64.407	ENSPMEG00000013120	trmt1	82	64.407	Poecilia_mexicana
ENSCAPG00000003355	TRMT1	94	63.653	ENSPREG00000000211	trmt1	79	63.653	Poecilia_reticulata
ENSCAPG00000003355	TRMT1	97	81.295	ENSPPYG00000009622	TRMT1	85	80.927	Pongo_abelii
ENSCAPG00000003355	TRMT1	98	71.530	ENSPCAG00000003698	TRMT1	86	71.530	Procavia_capensis
ENSCAPG00000003355	TRMT1	98	81.051	ENSPCOG00000008653	TRMT1	85	81.051	Propithecus_coquereli
ENSCAPG00000003355	TRMT1	99	80.177	ENSPVAG00000015076	TRMT1	86	80.177	Pteropus_vampyrus
ENSCAPG00000003355	TRMT1	94	58.537	ENSPNYG00000013960	trmt1	86	58.537	Pundamilia_nyererei
ENSCAPG00000003355	TRMT1	83	65.539	ENSPNAG00000024859	trmt1	82	65.539	Pygocentrus_nattereri
ENSCAPG00000003355	TRMT1	98	79.391	ENSRNOG00000002914	Trmt1	87	79.391	Rattus_norvegicus
ENSCAPG00000003355	TRMT1	97	62.545	ENSRBIG00000037505	-	88	62.345	Rhinopithecus_bieti
ENSCAPG00000003355	TRMT1	98	80.392	ENSRBIG00000038324	TRMT1	85	80.392	Rhinopithecus_bieti
ENSCAPG00000003355	TRMT1	98	80.214	ENSRROG00000028599	TRMT1	85	80.214	Rhinopithecus_roxellana
ENSCAPG00000003355	TRMT1	97	61.828	ENSRROG00000031847	-	87	61.634	Rhinopithecus_roxellana
ENSCAPG00000003355	TRMT1	75	38.813	YDR120C	-	76	38.813	Saccharomyces_cerevisiae
ENSCAPG00000003355	TRMT1	99	77.032	ENSSBOG00000028861	TRMT1	91	77.032	Saimiri_boliviensis_boliviensis
ENSCAPG00000003355	TRMT1	94	73.134	ENSSHAG00000014381	TRMT1	87	72.643	Sarcophilus_harrisii
ENSCAPG00000003355	TRMT1	94	63.516	ENSSFOG00015004139	trmt1	78	63.516	Scleropages_formosus
ENSCAPG00000003355	TRMT1	94	62.852	ENSSMAG00000021136	trmt1	79	62.852	Scophthalmus_maximus
ENSCAPG00000003355	TRMT1	94	62.430	ENSSDUG00000012740	trmt1	79	62.430	Seriola_dumerili
ENSCAPG00000003355	TRMT1	94	62.056	ENSSLDG00000005971	trmt1	79	62.056	Seriola_lalandi_dorsalis
ENSCAPG00000003355	TRMT1	88	83.299	ENSSARG00000005138	TRMT1	84	83.299	Sorex_araneus
ENSCAPG00000003355	TRMT1	95	55.556	ENSSPUG00000001084	TRMT1	84	56.322	Sphenodon_punctatus
ENSCAPG00000003355	TRMT1	94	61.163	ENSSPAG00000007153	trmt1	87	61.163	Stegastes_partitus
ENSCAPG00000003355	TRMT1	98	80.919	ENSSSCG00000013744	TRMT1	88	80.919	Sus_scrofa
ENSCAPG00000003355	TRMT1	88	63.265	ENSTRUG00000010700	trmt1	74	63.673	Takifugu_rubripes
ENSCAPG00000003355	TRMT1	94	62.335	ENSTNIG00000018808	trmt1	91	62.335	Tetraodon_nigroviridis
ENSCAPG00000003355	TRMT1	96	80.657	ENSTTRG00000006379	TRMT1	83	80.657	Tursiops_truncatus
ENSCAPG00000003355	TRMT1	99	80.000	ENSUAMG00000022911	TRMT1	92	77.897	Ursus_americanus
ENSCAPG00000003355	TRMT1	98	79.893	ENSUMAG00000006027	TRMT1	88	79.893	Ursus_maritimus
ENSCAPG00000003355	TRMT1	98	79.715	ENSVVUG00000024177	TRMT1	85	79.715	Vulpes_vulpes
ENSCAPG00000003355	TRMT1	78	69.811	ENSXETG00000033863	TRMT1	84	69.811	Xenopus_tropicalis
ENSCAPG00000003355	TRMT1	94	63.842	ENSXCOG00000015733	trmt1	82	63.842	Xiphophorus_couchianus
ENSCAPG00000003355	TRMT1	94	63.277	ENSXMAG00000013823	trmt1	91	63.465	Xiphophorus_maculatus