EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000003402 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 2365 bases
Position: chrAVPZ01000299.1:278831-281195
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000001654	zf-met	PF12874.7	3.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000003788	-	609	-	ENSCAPP00000001654	202 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000003402's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000003402's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000003402	-	90	99.451	ENSG00000104897	SF3A2	100	99.259	Homo_sapiens
ENSCAPG00000003402	-	90	95.604	ENSAPOG00000003916	sf3a2	61	95.604	Acanthochromis_polyacanthus
ENSCAPG00000003402	-	90	96.154	ENSACIG00000018153	sf3a2	62	96.154	Amphilophus_citrinellus
ENSCAPG00000003402	-	90	95.604	ENSAOCG00000015960	sf3a2	61	95.604	Amphiprion_ocellaris
ENSCAPG00000003402	-	90	95.604	ENSAPEG00000012336	sf3a2	61	95.604	Amphiprion_percula
ENSCAPG00000003402	-	90	95.604	ENSATEG00000015449	sf3a2	61	95.604	Anabas_testudineus
ENSCAPG00000003402	-	94	95.812	ENSANAG00000034031	-	92	95.812	Aotus_nancymaae
ENSCAPG00000003402	-	90	96.703	ENSACLG00000002356	sf3a2	62	96.703	Astatotilapia_calliptera
ENSCAPG00000003402	-	90	96.703	ENSAMXG00000032428	sf3a2	60	96.703	Astyanax_mexicanus
ENSCAPG00000003402	-	90	80.769	WBGene00008683	repo-1	82	80.769	Caenorhabditis_elegans
ENSCAPG00000003402	-	90	99.451	ENSCCAG00000009812	SF3A2	85	99.451	Cebus_capucinus
ENSCAPG00000003402	-	90	98.901	ENSCPBG00000018569	SF3A2	58	98.901	Chrysemys_picta_bellii
ENSCAPG00000003402	-	90	86.264	ENSCING00000003319	zf(matrin)-2	52	86.264	Ciona_intestinalis
ENSCAPG00000003402	-	95	96.392	ENSCGRG00000011089	Sf3a2	100	96.392	Cricetulus_griseus_crigri
ENSCAPG00000003402	-	90	96.154	ENSCSEG00000014308	sf3a2	64	96.154	Cynoglossus_semilaevis
ENSCAPG00000003402	-	90	96.703	ENSCVAG00000021349	sf3a2	62	96.703	Cyprinodon_variegatus
ENSCAPG00000003402	-	90	96.154	ENSDARG00000021107	sf3a2	65	96.154	Danio_rerio
ENSCAPG00000003402	-	90	85.246	FBgn0036314	Sf3a2	69	85.246	Drosophila_melanogaster
ENSCAPG00000003402	-	90	97.253	ENSELUG00000008471	sf3a2	59	97.253	Esox_lucius
ENSCAPG00000003402	-	96	96.891	ENSFDAG00000020911	-	98	96.891	Fukomys_damarensis
ENSCAPG00000003402	-	90	96.154	ENSFHEG00000002392	sf3a2	62	96.154	Fundulus_heteroclitus
ENSCAPG00000003402	-	90	96.154	ENSGMOG00000012186	sf3a2	60	96.154	Gadus_morhua
ENSCAPG00000003402	-	90	97.802	ENSGALG00000021679	SF3A2	58	97.802	Gallus_gallus
ENSCAPG00000003402	-	90	96.154	ENSGAFG00000008478	sf3a2	62	96.154	Gambusia_affinis
ENSCAPG00000003402	-	90	96.703	ENSGACG00000015255	sf3a2	62	96.703	Gasterosteus_aculeatus
ENSCAPG00000003402	-	67	98.529	ENSGAGG00000008500	SF3A2	50	98.529	Gopherus_agassizii
ENSCAPG00000003402	-	90	96.703	ENSHBUG00000021796	sf3a2	62	96.703	Haplochromis_burtoni
ENSCAPG00000003402	-	92	98.925	ENSHGLG00000015102	SF3A2	89	98.925	Heterocephalus_glaber_female
ENSCAPG00000003402	-	92	98.925	ENSHGLG00100000418	SF3A2	89	98.925	Heterocephalus_glaber_male
ENSCAPG00000003402	-	90	96.154	ENSHCOG00000001223	sf3a2	63	96.154	Hippocampus_comes
ENSCAPG00000003402	-	90	96.154	ENSIPUG00000019071	sf3a2	61	96.154	Ictalurus_punctatus
ENSCAPG00000003402	-	90	100.000	ENSSTOG00000007495	SF3A2	89	91.209	Ictidomys_tridecemlineatus
ENSCAPG00000003402	-	90	100.000	ENSJJAG00000010635	Sf3a2	94	100.000	Jaculus_jaculus
ENSCAPG00000003402	-	90	96.154	ENSKMAG00000006295	sf3a2	61	96.154	Kryptolebias_marmoratus
ENSCAPG00000003402	-	90	96.703	ENSLBEG00000000677	sf3a2	61	96.703	Labrus_bergylta
ENSCAPG00000003402	-	90	96.703	ENSLACG00000008744	SF3A2	58	96.703	Latimeria_chalumnae
ENSCAPG00000003402	-	90	97.253	ENSLOCG00000005835	sf3a2	59	97.253	Lepisosteus_oculatus
ENSCAPG00000003402	-	90	95.604	ENSMAMG00000009881	sf3a2	61	95.604	Mastacembelus_armatus
ENSCAPG00000003402	-	90	96.703	ENSMZEG00005025609	sf3a2	62	96.703	Maylandia_zebra
ENSCAPG00000003402	-	90	97.802	ENSMGAG00000001950	SF3A2	58	97.802	Meleagris_gallopavo
ENSCAPG00000003402	-	95	96.392	ENSMAUG00000005644	-	100	96.392	Mesocricetus_auratus
ENSCAPG00000003402	-	90	84.699	ENSMMOG00000010657	sf3a2	63	84.699	Mola_mola
ENSCAPG00000003402	-	90	95.604	ENSMALG00000020442	sf3a2	61	95.604	Monopterus_albus
ENSCAPG00000003402	-	95	95.876	MGP_CAROLIEiJ_G0015602	-	100	95.876	Mus_caroli
ENSCAPG00000003402	-	95	95.876	ENSMUSG00000020211	Sf3a2	100	95.876	Mus_musculus
ENSCAPG00000003402	-	95	95.876	MGP_PahariEiJ_G0031015	-	100	95.876	Mus_pahari
ENSCAPG00000003402	-	95	95.876	MGP_SPRETEiJ_G0016420	-	100	95.876	Mus_spretus
ENSCAPG00000003402	-	95	95.876	ENSNGAG00000023309	-	100	95.876	Nannospalax_galili
ENSCAPG00000003402	-	90	96.703	ENSNBRG00000019872	sf3a2	62	96.703	Neolamprologus_brichardi
ENSCAPG00000003402	-	90	100.000	ENSODEG00000013722	-	97	100.000	Octodon_degus
ENSCAPG00000003402	-	90	96.154	ENSONIG00000010198	sf3a2	62	96.154	Oreochromis_niloticus
ENSCAPG00000003402	-	90	98.901	ENSOANG00000013649	-	87	98.901	Ornithorhynchus_anatinus
ENSCAPG00000003402	-	90	95.055	ENSORLG00000015301	sf3a2	63	95.055	Oryzias_latipes
ENSCAPG00000003402	-	90	95.055	ENSORLG00020017235	sf3a2	63	95.055	Oryzias_latipes_hni
ENSCAPG00000003402	-	90	95.055	ENSORLG00015017116	sf3a2	63	95.055	Oryzias_latipes_hsok
ENSCAPG00000003402	-	90	95.055	ENSOMEG00000020860	sf3a2	63	95.055	Oryzias_melastigma
ENSCAPG00000003402	-	90	96.703	ENSPKIG00000009487	sf3a2	58	96.703	Paramormyrops_kingsleyae
ENSCAPG00000003402	-	90	98.901	ENSPSIG00000010839	SF3A2	57	98.901	Pelodiscus_sinensis
ENSCAPG00000003402	-	90	95.604	ENSPMGG00000017249	sf3a2	71	95.604	Periophthalmus_magnuspinnatus
ENSCAPG00000003402	-	90	96.154	ENSPFOG00000015945	sf3a2	62	96.154	Poecilia_formosa
ENSCAPG00000003402	-	90	96.154	ENSPLAG00000010052	sf3a2	62	96.154	Poecilia_latipinna
ENSCAPG00000003402	-	90	96.154	ENSPMEG00000000184	sf3a2	62	96.154	Poecilia_mexicana
ENSCAPG00000003402	-	90	96.154	ENSPREG00000017808	sf3a2	62	96.154	Poecilia_reticulata
ENSCAPG00000003402	-	90	96.703	ENSPNYG00000006928	sf3a2	62	96.703	Pundamilia_nyererei
ENSCAPG00000003402	-	90	96.703	ENSPNAG00000027582	sf3a2	60	96.703	Pygocentrus_nattereri
ENSCAPG00000003402	-	90	99.451	ENSSHAG00000011677	-	74	99.451	Sarcophilus_harrisii
ENSCAPG00000003402	-	78	85.443	ENSSHAG00000011646	-	55	85.443	Sarcophilus_harrisii
ENSCAPG00000003402	-	90	96.703	ENSSFOG00015010920	sf3a2	52	96.703	Scleropages_formosus
ENSCAPG00000003402	-	90	96.154	ENSSMAG00000002629	sf3a2	63	96.154	Scophthalmus_maximus
ENSCAPG00000003402	-	90	96.154	ENSSDUG00000015810	sf3a2	62	96.154	Seriola_dumerili
ENSCAPG00000003402	-	90	96.154	ENSSLDG00000010874	sf3a2	62	96.154	Seriola_lalandi_dorsalis
ENSCAPG00000003402	-	90	95.604	ENSSPAG00000004960	sf3a2	61	95.604	Stegastes_partitus
ENSCAPG00000003402	-	90	97.802	ENSTGUG00000000305	SF3A2	89	97.802	Taeniopygia_guttata
ENSCAPG00000003402	-	90	95.604	ENSTRUG00000009045	sf3a2	63	95.604	Takifugu_rubripes
ENSCAPG00000003402	-	90	95.055	ENSTNIG00000015318	sf3a2	63	95.055	Tetraodon_nigroviridis
ENSCAPG00000003402	-	90	96.154	ENSXCOG00000008222	sf3a2	62	96.154	Xiphophorus_couchianus
ENSCAPG00000003402	-	90	96.154	ENSXMAG00000029068	sf3a2	62	96.154	Xiphophorus_maculatus