EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAPG00000003643 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Minus strand
Length: 1208 bases
Position: chrAVPZ01000189.1:595573-596780
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000001740	RRM_1	PF00076.22	6.8e-29	1	2
ENSCAPP00000001740	RRM_1	PF00076.22	6.8e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000004059	-	1110	-	ENSCAPP00000001740	369 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000003643's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000003643's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAPG00000003643	-	55	85.714	ENSCAPG00000009337	-	56	85.714
ENSCAPG00000003643	-	55	64.844	ENSCAPG00000014707	-	56	64.655
ENSCAPG00000003643	-	50	82.209	ENSCAPG00000013321	-	71	82.209

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000003643	-	57	67.130	ENSAPOG00000003641	hnrnpa3	70	76.836	Acanthochromis_polyacanthus
ENSCAPG00000003643	-	51	72.021	ENSAPOG00000014678	-	53	76.243	Acanthochromis_polyacanthus
ENSCAPG00000003643	-	55	72.115	ENSAPOG00000003688	hnrnpa3	57	72.115	Acanthochromis_polyacanthus
ENSCAPG00000003643	-	59	51.628	ENSAPOG00000003387	HNRNPA0	61	57.386	Acanthochromis_polyacanthus
ENSCAPG00000003643	-	55	72.115	ENSAOCG00000004095	hnrnpa3	57	72.115	Amphiprion_ocellaris
ENSCAPG00000003643	-	55	72.115	ENSAPEG00000022522	hnrnpa3	57	72.115	Amphiprion_percula
ENSCAPG00000003643	-	53	73.267	ENSATEG00000015304	hnrnpa3	60	73.267	Anabas_testudineus
ENSCAPG00000003643	-	53	84.080	ENSACAG00000012234	-	53	84.080	Anolis_carolinensis
ENSCAPG00000003643	-	87	82.569	ENSANAG00000037918	-	91	78.593	Aotus_nancymaae
ENSCAPG00000003643	-	53	73.762	ENSACLG00000008532	hnrnpa3	60	73.762	Astatotilapia_calliptera
ENSCAPG00000003643	-	50	74.869	ENSAMXG00000007065	hnrnpa3	57	74.257	Astyanax_mexicanus
ENSCAPG00000003643	-	95	85.070	ENSCJAG00000013830	-	90	84.568	Callithrix_jacchus
ENSCAPG00000003643	-	51	71.144	ENSCATG00000038569	-	56	75.124	Cercocebus_atys
ENSCAPG00000003643	-	55	44.706	ENSCATG00000021167	HNRNPA0	75	44.828	Cercocebus_atys
ENSCAPG00000003643	-	89	64.545	ENSCLAG00000007120	-	67	61.200	Chinchilla_lanigera
ENSCAPG00000003643	-	54	52.174	ENSCSAG00000000499	HNRNPA0	76	47.826	Chlorocebus_sabaeus
ENSCAPG00000003643	-	63	64.050	ENSCSAG00000011517	-	53	62.621	Chlorocebus_sabaeus
ENSCAPG00000003643	-	54	86.408	ENSCANG00000017881	-	55	86.408	Colobus_angolensis_palliatus
ENSCAPG00000003643	-	54	52.174	ENSCANG00000038062	HNRNPA0	75	47.826	Colobus_angolensis_palliatus
ENSCAPG00000003643	-	54	71.359	ENSCGRG00001010070	-	90	57.447	Cricetulus_griseus_chok1gshd
ENSCAPG00000003643	-	51	80.513	ENSCGRG00000003686	-	73	70.306	Cricetulus_griseus_crigri
ENSCAPG00000003643	-	55	70.952	ENSCGRG00000007592	-	90	61.261	Cricetulus_griseus_crigri
ENSCAPG00000003643	-	60	70.175	ENSDARG00000059351	hnrnpa3	83	74.627	Danio_rerio
ENSCAPG00000003643	-	53	83.663	ENSDNOG00000031964	-	63	84.080	Dasypus_novemcinctus
ENSCAPG00000003643	-	88	73.112	ENSDORG00000023528	-	87	67.674	Dipodomys_ordii
ENSCAPG00000003643	-	59	58.108	ENSEBUG00000016570	HNRNPA0	54	66.484	Eptatretus_burgeri
ENSCAPG00000003643	-	53	71.287	ENSELUG00000023080	hnrnpa3	61	73.889	Esox_lucius
ENSCAPG00000003643	-	58	66.816	ENSFDAG00000014067	-	60	69.307	Fukomys_damarensis
ENSCAPG00000003643	-	56	70.531	ENSFDAG00000018739	-	78	70.531	Fukomys_damarensis
ENSCAPG00000003643	-	90	70.642	ENSFDAG00000000331	-	52	70.500	Fukomys_damarensis
ENSCAPG00000003643	-	53	73.267	ENSGACG00000004477	hnrnpa3	65	73.267	Gasterosteus_aculeatus
ENSCAPG00000003643	-	60	49.782	ENSGAGG00000005632	HNRNPA0	58	57.865	Gopherus_agassizii
ENSCAPG00000003643	-	53	73.762	ENSHBUG00000019734	hnrnpa3	60	73.762	Haplochromis_burtoni
ENSCAPG00000003643	-	53	81.026	ENSHGLG00000014577	-	79	79.907	Heterocephalus_glaber_female
ENSCAPG00000003643	-	86	82.099	ENSHGLG00100001336	-	91	82.099	Heterocephalus_glaber_male
ENSCAPG00000003643	-	53	86.500	ENSHGLG00100006677	-	56	86.500	Heterocephalus_glaber_male
ENSCAPG00000003643	-	50	52.747	ENSHCOG00000007174	HNRNPA0	96	53.672	Hippocampus_comes
ENSCAPG00000003643	-	50	75.393	ENSIPUG00000019815	RO32	55	77.049	Ictalurus_punctatus
ENSCAPG00000003643	-	86	72.414	ENSSTOG00000019374	-	87	70.219	Ictidomys_tridecemlineatus
ENSCAPG00000003643	-	62	50.427	ENSJJAG00000006954	Hnrnpa0	61	56.742	Jaculus_jaculus
ENSCAPG00000003643	-	53	72.772	ENSKMAG00000015973	hnrnpa3	60	72.772	Kryptolebias_marmoratus
ENSCAPG00000003643	-	53	74.257	ENSLBEG00000016767	hnrnpa3	60	74.257	Labrus_bergylta
ENSCAPG00000003643	-	58	76.018	ENSLACG00000008189	hnrnpa3	52	81.622	Latimeria_chalumnae
ENSCAPG00000003643	-	53	78.325	ENSLOCG00000006986	hnrnpa3	53	80.541	Lepisosteus_oculatus
ENSCAPG00000003643	-	68	67.954	ENSLAFG00000027712	-	57	96.226	Loxodonta_africana
ENSCAPG00000003643	-	54	52.174	ENSMFAG00000030522	HNRNPA0	75	47.826	Macaca_fascicularis
ENSCAPG00000003643	-	51	70.443	ENSMMUG00000031232	-	56	74.384	Macaca_mulatta
ENSCAPG00000003643	-	62	67.227	ENSMNEG00000038943	-	83	70.698	Macaca_nemestrina
ENSCAPG00000003643	-	54	52.174	ENSMNEG00000015863	HNRNPA0	75	47.826	Macaca_nemestrina
ENSCAPG00000003643	-	97	76.757	ENSMLEG00000033415	-	57	70.561	Mandrillus_leucophaeus
ENSCAPG00000003643	-	54	52.174	ENSMLEG00000026629	HNRNPA0	75	47.826	Mandrillus_leucophaeus
ENSCAPG00000003643	-	51	75.000	ENSMZEG00005004663	hnrnpa3	59	74.619	Maylandia_zebra
ENSCAPG00000003643	-	53	81.500	ENSMODG00000024570	-	56	81.500	Monodelphis_domestica
ENSCAPG00000003643	-	90	57.988	ENSMALG00000009691	hnrnpa3	76	75.691	Monopterus_albus
ENSCAPG00000003643	-	51	46.781	MGP_CAROLIEiJ_G0018593	Hnrnpa0	58	56.742	Mus_caroli
ENSCAPG00000003643	-	53	46.186	MGP_PahariEiJ_G0019657	Hnrnpa0	58	56.742	Mus_pahari
ENSCAPG00000003643	-	88	58.434	ENSNGAG00000001008	-	59	68.372	Nannospalax_galili
ENSCAPG00000003643	-	53	87.755	ENSNLEG00000027151	-	58	87.755	Nomascus_leucogenys
ENSCAPG00000003643	-	54	72.464	ENSONIG00000008607	hnrnpa3	51	73.529	Oreochromis_niloticus
ENSCAPG00000003643	-	88	38.298	ENSORLG00020008203	-	58	47.368	Oryzias_latipes_hni
ENSCAPG00000003643	-	88	39.879	ENSORLG00020007505	-	58	47.674	Oryzias_latipes_hni
ENSCAPG00000003643	-	50	48.588	ENSORLG00020022487	-	60	49.419	Oryzias_latipes_hni
ENSCAPG00000003643	-	65	37.083	ENSORLG00015016236	HNRNPA0	61	44.586	Oryzias_latipes_hsok
ENSCAPG00000003643	-	53	73.762	ENSORLG00015014774	hnrnpa3	59	73.762	Oryzias_latipes_hsok
ENSCAPG00000003643	-	88	40.240	ENSORLG00015016507	-	55	48.571	Oryzias_latipes_hsok
ENSCAPG00000003643	-	50	46.369	ENSORLG00015015185	-	58	48.538	Oryzias_latipes_hsok
ENSCAPG00000003643	-	91	40.179	ENSORLG00015017144	-	59	48.295	Oryzias_latipes_hsok
ENSCAPG00000003643	-	51	40.625	ENSORLG00015016302	HNRNPA0	59	47.253	Oryzias_latipes_hsok
ENSCAPG00000003643	-	53	74.257	ENSOMEG00000004838	hnrnpa3	60	74.257	Oryzias_melastigma
ENSCAPG00000003643	-	61	51.082	ENSOARG00000015434	HNRNPA0	77	47.807	Ovis_aries
ENSCAPG00000003643	-	54	52.174	ENSPANG00000012900	HNRNPA0	75	47.826	Papio_anubis
ENSCAPG00000003643	-	53	75.248	ENSPKIG00000022916	hnrnpa3	72	75.248	Paramormyrops_kingsleyae
ENSCAPG00000003643	-	62	51.948	ENSPKIG00000020281	-	53	59.091	Paramormyrops_kingsleyae
ENSCAPG00000003643	-	64	57.551	ENSPMGG00000000747	hnrnpa3	75	74.375	Periophthalmus_magnuspinnatus
ENSCAPG00000003643	-	65	48.163	ENSPEMG00000020274	Hnrnpa0	83	56.742	Peromyscus_maniculatus_bairdii
ENSCAPG00000003643	-	53	64.039	ENSPMAG00000004449	-	78	68.132	Petromyzon_marinus
ENSCAPG00000003643	-	53	71.782	ENSPFOG00000014049	hnrnpa3	61	71.782	Poecilia_formosa
ENSCAPG00000003643	-	90	42.593	ENSPLAG00000015223	-	57	49.123	Poecilia_latipinna
ENSCAPG00000003643	-	53	71.782	ENSPMEG00000006390	hnrnpa3	61	71.782	Poecilia_mexicana
ENSCAPG00000003643	-	72	62.637	ENSPREG00000005411	hnrnpa3	73	65.611	Poecilia_reticulata
ENSCAPG00000003643	-	53	86.567	ENSPPYG00000001012	-	65	86.567	Pongo_abelii
ENSCAPG00000003643	-	57	65.438	ENSPNYG00000008424	hnrnpa3	74	77.401	Pundamilia_nyererei
ENSCAPG00000003643	-	60	48.869	ENSPNAG00000023333	HNRNPA0	62	54.545	Pygocentrus_nattereri
ENSCAPG00000003643	-	54	75.490	ENSSFOG00015001814	hnrnpa3	56	75.862	Scleropages_formosus
ENSCAPG00000003643	-	50	74.603	ENSSFOG00015016280	hnrnpa1	53	76.667	Scleropages_formosus
ENSCAPG00000003643	-	54	72.464	ENSSMAG00000015218	hnrnpa3	54	72.549	Scophthalmus_maximus
ENSCAPG00000003643	-	89	55.856	ENSSDUG00000000381	hnrnpa3	59	76.216	Seriola_dumerili
ENSCAPG00000003643	-	53	73.267	ENSSPAG00000008969	hnrnpa3	60	73.267	Stegastes_partitus
ENSCAPG00000003643	-	86	70.427	ENSSSCG00000001098	-	90	70.427	Sus_scrofa
ENSCAPG00000003643	-	53	72.772	ENSTRUG00000017504	hnrnpa3	60	72.772	Takifugu_rubripes
ENSCAPG00000003643	-	51	40.952	ENSTRUG00000021494	-	58	46.857	Takifugu_rubripes
ENSCAPG00000003643	-	53	72.000	ENSTNIG00000016958	hnrnpa3	58	72.000	Tetraodon_nigroviridis
ENSCAPG00000003643	-	53	81.592	ENSXETG00000001806	hnrnpa3	54	81.592	Xenopus_tropicalis
ENSCAPG00000003643	-	53	72.277	ENSXMAG00000000439	hnrnpa3	61	72.277	Xiphophorus_maculatus